RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 SENP3-EIF4A1A0A087X0R7 540 aa10.55□□□□□ -0.72
CHD8-201ENST00000399982 GOLGA3Q08378 1498 aa10.55□□□□□ -0.72
CHD8-201ENST00000399982 GSE1Q14687 1217 aa10.54□□□□□ -0.72
CHD8-201ENST00000399982 NPM1P06748 294 aaKnown RBP eCLIP10.54□□□□□ -0.72
CHD8-201ENST00000399982 GPS2Q13227 327 aa10.53□□□□□ -0.72
CHD8-201ENST00000399982 TPM4P67936 248 aa10.52□□□□□ -0.73
CHD8-201ENST00000399982 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.52□□□□□ -0.73
CHD8-201ENST00000399982 VPS53Q5VIR6 699 aa10.52□□□□□ -0.73
CHD8-201ENST00000399982 HSP90B1P14625 803 aaKnown RBP10.51□□□□□ -0.73
CHD8-201ENST00000399982 NOM1Q5C9Z4 860 aaKnown RBP10.5□□□□□ -0.73
CHD8-201ENST00000399982 B4GALNT3Q6L9W6 998 aa10.5□□□□□ -0.73
CHD8-201ENST00000399982 KNSTRNQ9Y448 316 aa10.5□□□□□ -0.73
CHD8-201ENST00000399982 PKNOX2Q96KN3 472 aa10.5□□□□□ -0.73
CHD8-201ENST00000399982 RGS3P49796 1198 aa10.5□□□□□ -0.73
CHD8-201ENST00000399982 TEX35Q5T0J7 233 aa10.49□□□□□ -0.73
CHD8-201ENST00000399982 CCDC34Q96HJ3 373 aa10.49□□□□□ -0.73
CHD8-201ENST00000399982 TMX4Q9H1E5 349 aaPredicted RBP10.49□□□□□ -0.73
CHD8-201ENST00000399982 TNIKQ9UKE5 1360 aa10.49□□□□□ -0.73
CHD8-201ENST00000399982 RASSF8Q8NHQ8 419 aa10.49□□□□□ -0.73
CHD8-201ENST00000399982 CEP162Q5TB80 1403 aa10.48□□□□□ -0.73
CHD8-201ENST00000399982 TPM2P07951 284 aa10.48□□□□□ -0.73
CHD8-201ENST00000399982 PDE3BQ13370 1112 aa10.48□□□□□ -0.73
CHD8-201ENST00000399982 MTUS2Q5JR59 1369 aa10.48□□□□□ -0.73
CHD8-201ENST00000399982 NEUROD2Q15784 382 aa10.48□□□□□ -0.73
CHD8-201ENST00000399982 TAF3Q5VWG9 929 aa10.47□□□□□ -0.73
CHD8-201ENST00000399982 CCDC66A2RUB6 948 aa10.47□□□□□ -0.73
CHD8-201ENST00000399982 PHLDB1Q86UU1 1377 aa10.47□□□□□ -0.73
CHD8-201ENST00000399982 CALD1Q05682 793 aaKnown RBP10.47□□□□□ -0.73
CHD8-201ENST00000399982 NUDCQ9Y266 331 aa10.47□□□□□ -0.73
CHD8-201ENST00000399982 PES1O00541 588 aaKnown RBP10.46□□□□□ -0.73
CHD8-201ENST00000399982 FRAT1Q92837 279 aaPredicted RBP10.46□□□□□ -0.73
CHD8-201ENST00000399982 G3V3G9 751 aa10.46□□□□□ -0.74
CHD8-201ENST00000399982 DCAF8Q5TAQ9 597 aa10.46□□□□□ -0.74
CHD8-201ENST00000399982 TPM3P06753 285 aa10.45□□□□□ -0.74
CHD8-201ENST00000399982 PMFBP1Q8TBY8 1022 aa10.45□□□□□ -0.74
CHD8-201ENST00000399982 RWDD1Q9H446 243 aaPredicted RBP10.45□□□□□ -0.74
CHD8-201ENST00000399982 TSPY4P0CV99 314 aa10.45□□□□□ -0.74
CHD8-201ENST00000399982 TSPY10P0CW01 314 aa10.45□□□□□ -0.74
CHD8-201ENST00000399982 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.44□□□□□ -0.742e-6■■■■■ 149.1
CHD8-201ENST00000399982 MAPK8IP3Q9UPT6 1336 aa10.43□□□□□ -0.74
CHD8-201ENST00000399982 IPO8O15397 1037 aaKnown RBP10.43□□□□□ -0.74
CHD8-201ENST00000399982 CHMP4CQ96CF2 233 aa10.43□□□□□ -0.74
CHD8-201ENST00000399982 MARCH6O60337 910 aa10.43□□□□□ -0.74
CHD8-201ENST00000399982 CCAR2Q8N163 923 aaKnown RBP10.43□□□□□ -0.74
CHD8-201ENST00000399982 CWC15Q9P013 229 aaKnown RBP10.42□□□□□ -0.74
CHD8-201ENST00000399982 CEP164Q9UPV0 1460 aa10.42□□□□□ -0.74
CHD8-201ENST00000399982 ZNF771Q7L3S4 317 aaPredicted RBP10.42□□□□□ -0.74
CHD8-201ENST00000399982 GZF1Q9H116 711 aaPredicted RBP10.42□□□□□ -0.74
CHD8-201ENST00000399982 KIAA1211Q6ZU35 1233 aa10.41□□□□□ -0.74
CHD8-201ENST00000399982 RALBP1Q15311 655 aa10.41□□□□□ -0.74
CHD8-201ENST00000399982 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.4□□□□□ -0.74
CHD8-201ENST00000399982 CHMP4AQ9BY43 222 aa10.4□□□□□ -0.74
CHD8-201ENST00000399982 RRP9O43818 475 aaKnown RBP10.4□□□□□ -0.74
CHD8-201ENST00000399982 CHIC2Q9UKJ5 165 aa10.4□□□□□ -0.74
CHD8-201ENST00000399982 ZCCHC6Q5VYS8 1495 aaKnown RBP10.4□□□□□ -0.74
CHD8-201ENST00000399982 HIRIP3Q9BW71 556 aaPredicted RBP10.4□□□□□ -0.74
CHD8-201ENST00000399982 ATP6V1DQ9Y5K8 247 aa10.4□□□□□ -0.74
CHD8-201ENST00000399982 ZNF330Q9Y3S2 320 aaPredicted RBP10.4□□□□□ -0.74
CHD8-201ENST00000399982 TPD52L1Q16890 204 aaPredicted RBP10.4□□□□□ -0.75
CHD8-201ENST00000399982 KIF16BQ96L93 1317 aa10.39□□□□□ -0.75
CHD8-201ENST00000399982 FAM43AQ8N2R8 423 aa10.39□□□□□ -0.75
CHD8-201ENST00000399982 PODXL2Q9NZ53 605 aa10.39□□□□□ -0.75
CHD8-201ENST00000399982 RCAN3Q9UKA8 241 aa10.39□□□□□ -0.75
CHD8-201ENST00000399982 APBB1O00213 710 aa10.38□□□□□ -0.75
CHD8-201ENST00000399982 ROCK2O75116 1388 aaKnown RBP10.38□□□□□ -0.75
CHD8-201ENST00000399982 CCDC70Q6NSX1 233 aa10.38□□□□□ -0.75
CHD8-201ENST00000399982 ACBD3Q9H3P7 528 aa10.38□□□□□ -0.75
CHD8-201ENST00000399982 HMGN5P82970 282 aaKnown RBP10.38□□□□□ -0.75
CHD8-201ENST00000399982 DIAPH3Q9NSV4 1193 aa10.38□□□□□ -0.75
CHD8-201ENST00000399982 TCEAL9Q9UHQ7 104 aa10.38□□□□□ -0.75
CHD8-201ENST00000399982 TSR1Q2NL82 804 aaKnown RBP10.37□□□□□ -0.75
CHD8-201ENST00000399982 ARGLU1Q9NWB6 273 aaPredicted RBP10.37□□□□□ -0.75
CHD8-201ENST00000399982 KIF3AQ9Y496 699 aa10.37□□□□□ -0.75
CHD8-201ENST00000399982 PRKCSHP14314 528 aaPredicted RBP10.37□□□□□ -0.75
CHD8-201ENST00000399982 SOX12O15370 315 aa10.36□□□□□ -0.75
CHD8-201ENST00000399982 TSPYL1Q9H0U9 437 aa10.36□□□□□ -0.75
CHD8-201ENST00000399982 AAMPQ13685 434 aa10.36□□□□□ -0.75
CHD8-201ENST00000399982 CENPQQ7L2Z9 268 aaPredicted RBP10.36□□□□□ -0.75
CHD8-201ENST00000399982 ST18O60284 1047 aa10.35□□□□□ -0.75
CHD8-201ENST00000399982 FAM161AQ3B820 660 aa10.35□□□□□ -0.75
CHD8-201ENST00000399982 CARD11Q9BXL7 1154 aa10.35□□□□□ -0.75
CHD8-201ENST00000399982 KTN1Q86UP2 1357 aaKnown RBP10.35□□□□□ -0.75
CHD8-201ENST00000399982 PLCD4Q9BRC7 762 aa10.35□□□□□ -0.75
CHD8-201ENST00000399982 MYO15BQ96JP2 1530 aa10.35□□□□□ -0.75
CHD8-201ENST00000399982 MRE11P49959 708 aa10.35□□□□□ -0.75
CHD8-201ENST00000399982 U2SURPO15042 1029 aaKnown RBP10.34□□□□□ -0.75
CHD8-201ENST00000399982 DHX8Q14562 1220 aaKnown RBP10.34□□□□□ -0.75
CHD8-201ENST00000399982 HDAC5Q9UQL6 1122 aa10.34□□□□□ -0.75
CHD8-201ENST00000399982 CHMP3Q9Y3E7 222 aa10.34□□□□□ -0.75
CHD8-201ENST00000399982 GORABQ5T7V8 394 aa10.34□□□□□ -0.75
CHD8-201ENST00000399982 CCNB3Q8WWL7 1395 aa10.34□□□□□ -0.75
CHD8-201ENST00000399982 NGEFQ8N5V2 710 aa10.33□□□□□ -0.76
CHD8-201ENST00000399982 FHAD1B1AJZ9 1412 aa10.33□□□□□ -0.76
CHD8-201ENST00000399982 SLKQ9H2G2 1235 aaPredicted RBP10.33□□□□□ -0.76
CHD8-201ENST00000399982 AK7Q96M32 723 aa10.33□□□□□ -0.76
CHD8-201ENST00000399982 CDR1P51861 262 aa10.32□□□□□ -0.76
CHD8-201ENST00000399982 MEX3CQ5U5Q3 659 aaKnown RBP10.32□□□□□ -0.76
CHD8-201ENST00000399982 PCMTD1Q96MG8 357 aaPredicted RBP10.31□□□□□ -0.76
CHD8-201ENST00000399982 TMF1P82094 1093 aa10.31□□□□□ -0.76
CHD8-201ENST00000399982 HMMRO75330 724 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms