RNA–Protein interactions for RNA: ENST00000399219.7

PMPCA-203, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2 BASIC

Gene PMPCA, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-203ENST00000399219 PPP1R15AO75807 674 aaPredicted RBP30.12■■■□□ 2.41
PMPCA-203ENST00000399219 CFDP1Q9UEE9 299 aaPredicted RBP30.12■■■□□ 2.41
PMPCA-203ENST00000399219 SHROOM2Q13796 1616 aa30.1■■■□□ 2.41
PMPCA-203ENST00000399219 CAMSAP2Q08AD1 1489 aa30.08■■■□□ 2.41
PMPCA-203ENST00000399219 KIF14Q15058 1648 aa30.08■■■□□ 2.41
PMPCA-203ENST00000399219 TONSLQ96HA7 1378 aa30.07■■■□□ 2.4
PMPCA-203ENST00000399219 ZNF644Q9H582 1327 aaPredicted RBP30.06■■■□□ 2.4
PMPCA-203ENST00000399219 ABCC10Q5T3U5 1492 aa30.03■■■□□ 2.4
PMPCA-203ENST00000399219 KDM6BO15054 1643 aa30.02■■■□□ 2.4
PMPCA-203ENST00000399219 DENND4BO75064 1496 aaPredicted RBP29.99■■■□□ 2.39
PMPCA-203ENST00000399219 ADGRL2O95490 1459 aa29.99■■■□□ 2.39
PMPCA-203ENST00000399219 TRIM52Q96A61 297 aa29.99■■■□□ 2.39
PMPCA-203ENST00000399219 MPHOSPH9Q99550 1183 aa29.97■■■□□ 2.39
PMPCA-203ENST00000399219 NCOA1Q15788 1441 aa29.95■■■□□ 2.38
PMPCA-203ENST00000399219 ADGBQ8N7X0 1667 aa29.92■■■□□ 2.38
PMPCA-203ENST00000399219 CDC42BPAQ5VT25 1732 aa29.91■■■□□ 2.38
PMPCA-203ENST00000399219 CROCC2H7BZ55 1655 aa29.91■■■□□ 2.38
PMPCA-203ENST00000399219 SHANK2Q9UPX8 1470 aa29.91■■■□□ 2.38
PMPCA-203ENST00000399219 ANKRD30AQ9BXX3 1397 aa29.88■■■□□ 2.37
PMPCA-203ENST00000399219 ZNF777Q9ULD5 760 aaPredicted RBP29.86■■■□□ 2.37
PMPCA-203ENST00000399219 CLASP1Q7Z460 1538 aa29.86■■■□□ 2.37
PMPCA-203ENST00000399219 KDM5BQ9UGL1 1544 aa29.86■■■□□ 2.37
PMPCA-203ENST00000399219 SCAF1Q9H7N4 1312 aaKnown RBP29.84■■■□□ 2.37
PMPCA-203ENST00000399219 ABCC2Q92887 1545 aa29.84■■■□□ 2.37
PMPCA-203ENST00000399219 ANKRD30BQ9BXX2 1392 aa29.81■■■□□ 2.36
PMPCA-203ENST00000399219 ARHGEF5Q12774 1597 aa29.8■■■□□ 2.36
PMPCA-203ENST00000399219 RSPH4AQ5TD94 716 aa29.77■■■□□ 2.36
PMPCA-203ENST00000399219 C9orf84Q5VXU9 1444 aa29.76■■■□□ 2.36
PMPCA-203ENST00000399219 ERCC6L2Q5T890 1561 aa29.76■■■□□ 2.35
PMPCA-203ENST00000399219 UHRF1BP1LA0JNW5 1464 aa29.75■■■□□ 2.35
PMPCA-203ENST00000399219 RPRD2Q5VT52 1461 aaKnown RBP29.75■■■□□ 2.35
PMPCA-203ENST00000399219 SLC4A1APQ9BWU0 796 aaKnown RBP29.75■■■□□ 2.35
PMPCA-203ENST00000399219 PREX2Q70Z35 1606 aa29.75■■■□□ 2.35
PMPCA-203ENST00000399219 TSPY4P0CV99 314 aa29.74■■■□□ 2.35
PMPCA-203ENST00000399219 TSPY10P0CW01 314 aa29.74■■■□□ 2.35
PMPCA-203ENST00000399219 ANKRD50Q9ULJ7 1429 aa29.74■■■□□ 2.35
PMPCA-203ENST00000399219 PZPP20742 1482 aa29.73■■■□□ 2.35
PMPCA-203ENST00000399219 MBD5Q9P267 1494 aa29.73■■■□□ 2.35
PMPCA-203ENST00000399219 YTHDC1Q96MU7 727 aaKnown RBP29.7■■■□□ 2.35
PMPCA-203ENST00000399219 CCDC141Q6ZP82 1450 aa29.67■■■□□ 2.34
PMPCA-203ENST00000399219 CDC42BPBQ9Y5S2 1711 aa29.67■■■□□ 2.34
PMPCA-203ENST00000399219 SAMD9LQ8IVG5 1584 aa29.66■■■□□ 2.34
PMPCA-203ENST00000399219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.65■■■□□ 2.34
PMPCA-203ENST00000399219 FOXD1Q16676 465 aa29.64■■■□□ 2.34
PMPCA-203ENST00000399219 KIAA1107Q9UPP5 1409 aa29.64■■■□□ 2.34
PMPCA-203ENST00000399219 L3MBTL2Q969R5 705 aa29.63■■■□□ 2.33
PMPCA-203ENST00000399219 PLEKHH2Q8IVE3 1493 aa29.63■■■□□ 2.33
PMPCA-203ENST00000399219 DDX10Q13206 875 aaKnown RBP29.62■■■□□ 2.33
PMPCA-203ENST00000399219 KDM5DQ9BY66 1539 aa29.62■■■□□ 2.33
PMPCA-203ENST00000399219 HNRNPMP52272 730 aaKnown RBP eCLIP29.61■■■□□ 2.33
PMPCA-203ENST00000399219 TTC37Q6PGP7 1564 aa29.61■■■□□ 2.33
PMPCA-203ENST00000399219 TEX14Q8IWB6 1497 aa29.61■■■□□ 2.33
PMPCA-203ENST00000399219 KIF15Q9NS87 1388 aa29.6■■■□□ 2.33
PMPCA-203ENST00000399219 ARHGAP5Q13017 1502 aa29.58■■■□□ 2.33
PMPCA-203ENST00000399219 MAST1Q9Y2H9 1570 aa29.57■■■□□ 2.32
PMPCA-203ENST00000399219 ZCCHC11Q5TAX3 1644 aaKnown RBP29.56■■■□□ 2.32
PMPCA-203ENST00000399219 MYO5CQ9NQX4 1742 aa29.54■■■□□ 2.32
PMPCA-203ENST00000399219 NUP155O75694 1391 aa29.53■■■□□ 2.32
PMPCA-203ENST00000399219 HIRIP3Q9BW71 556 aaPredicted RBP29.53■■■□□ 2.32
PMPCA-203ENST00000399219 GTF3C3Q9Y5Q9 886 aa29.52■■■□□ 2.32
PMPCA-203ENST00000399219 PLCH2O75038 1416 aa29.52■■■□□ 2.32
PMPCA-203ENST00000399219 PKD2Q13563 968 aa29.52■■■□□ 2.32
PMPCA-203ENST00000399219 EIF4G2P78344 907 aaKnown RBP eCLIP29.51■■■□□ 2.31
PMPCA-203ENST00000399219 SYCP2Q9BX26 1530 aa29.51■■■□□ 2.31
PMPCA-203ENST00000399219 HSPA5P11021 654 aaKnown RBP29.45■■■□□ 2.31
PMPCA-203ENST00000399219 PLXNC1O60486 1568 aa29.44■■■□□ 2.3
PMPCA-203ENST00000399219 ARAP3Q8WWN8 1544 aa29.44■■■□□ 2.3
PMPCA-203ENST00000399219 EFCAB2Q5VUJ9 269 aa29.43■■■□□ 2.3
PMPCA-203ENST00000399219 CCER2I3L3R5 266 aa29.43■■■□□ 2.3
PMPCA-203ENST00000399219 KCNH8Q96L42 1107 aa29.43■■■□□ 2.3
PMPCA-203ENST00000399219 ANP32CO43423 234 aa29.41■■■□□ 2.3
PMPCA-203ENST00000399219 NBPF8Q3BBV2 869 aa29.39■■■□□ 2.3
PMPCA-203ENST00000399219 FAM135AQ9P2D6 1515 aa29.35■■■□□ 2.29
PMPCA-203ENST00000399219 ARHGEF12Q9NZN5 1544 aa29.35■■■□□ 2.29
PMPCA-203ENST00000399219 UNC13BO14795 1591 aa29.34■■■□□ 2.29
PMPCA-203ENST00000399219 ABCC1P33527 1531 aa29.34■■■□□ 2.29
PMPCA-203ENST00000399219 SPATA31E1Q6ZUB1 1445 aa29.34■■■□□ 2.29
PMPCA-203ENST00000399219 DUOX2Q9NRD8 1548 aa29.33■■■□□ 2.29
PMPCA-203ENST00000399219 WASHC2AQ641Q2 1341 aa29.33■■■□□ 2.29
PMPCA-203ENST00000399219 WDR7Q9Y4E6 1490 aa29.33■■■□□ 2.29
PMPCA-203ENST00000399219 UHRF1BP1Q6BDS2 1440 aa29.31■■■□□ 2.28
PMPCA-203ENST00000399219 ERBINQ96RT1 1412 aa29.31■■■□□ 2.28
PMPCA-203ENST00000399219 RTEL1-TNFRSF6BF6WH68 1400 aa29.26■■■□□ 2.27
PMPCA-203ENST00000399219 MAGI2Q86UL8 1455 aa29.25■■■□□ 2.27
PMPCA-203ENST00000399219 OSCARQ8IYS5 282 aa29.24■■■□□ 2.27
PMPCA-203ENST00000399219 CCDC7Q96M83 1385 aa29.23■■■□□ 2.27
PMPCA-203ENST00000399219 IQGAP3Q86VI3 1631 aa29.23■■■□□ 2.27
PMPCA-203ENST00000399219 ABCA9Q8IUA7 1624 aa29.21■■■□□ 2.27
PMPCA-203ENST00000399219 TRAPPC8Q9Y2L5 1435 aa29.2■■■□□ 2.27
PMPCA-203ENST00000399219 CNTLNQ9NXG0 1405 aa29.2■■■□□ 2.26
PMPCA-203ENST00000399219 RALGAPBQ86X10 1494 aa29.19■■■□□ 2.26
PMPCA-203ENST00000399219 CCDC144AA2RUR9 1427 aa29.16■■■□□ 2.26
PMPCA-203ENST00000399219 ATP10AO60312 1499 aa29.16■■■□□ 2.26
PMPCA-203ENST00000399219 SPAG9O60271 1321 aaKnown RBP29.15■■■□□ 2.26
PMPCA-203ENST00000399219 POLR1AO95602 1720 aaPredicted RBP29.14■■■□□ 2.26
PMPCA-203ENST00000399219 FANCAO15360 1455 aa29.14■■■□□ 2.25
PMPCA-203ENST00000399219 ARID4BQ4LE39 1312 aaPredicted RBP29.13■■■□□ 2.25
PMPCA-203ENST00000399219 ASXL2Q76L83 1435 aa29.13■■■□□ 2.25
PMPCA-203ENST00000399219 C11orf95C9JLR9 678 aaPredicted RBP29.13■■■□□ 2.25
PMPCA-203ENST00000399219 USP47Q96K76 1375 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms