RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 MAPKBP1O60336 1514 aa22.3■■□□□ 1.16
COL25A1-201ENST00000399126 OSCARQ8IYS5 282 aa22.3■■□□□ 1.16
COL25A1-201ENST00000399126 CAMSAP2Q08AD1 1489 aa22.29■■□□□ 1.16
COL25A1-201ENST00000399126 DAPK1P53355 1430 aa22.27■■□□□ 1.16
COL25A1-201ENST00000399126 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.16
COL25A1-201ENST00000399126 DNMT1P26358 1616 aaKnown RBP22.27■■□□□ 1.16
COL25A1-201ENST00000399126 ABCC5O15440 1437 aa22.27■■□□□ 1.16
COL25A1-201ENST00000399126 ZCCHC11Q5TAX3 1644 aaKnown RBP22.26■■□□□ 1.15
COL25A1-201ENST00000399126 KDM6BO15054 1643 aa22.24■■□□□ 1.15
COL25A1-201ENST00000399126 UHRF1BP1LA0JNW5 1464 aa22.23■■□□□ 1.15
COL25A1-201ENST00000399126 GCC2Q8IWJ2 1684 aa22.22■■□□□ 1.15
COL25A1-201ENST00000399126 TTC37Q6PGP7 1564 aa22.22■■□□□ 1.15
COL25A1-201ENST00000399126 KDM5BQ9UGL1 1544 aa22.21■■□□□ 1.15
COL25A1-201ENST00000399126 PLPPR3Q6T4P5 718 aa22.2■■□□□ 1.14
COL25A1-201ENST00000399126 KCNH8Q96L42 1107 aa22.2■■□□□ 1.14
COL25A1-201ENST00000399126 CDC42BPBQ9Y5S2 1711 aa22.19■■□□□ 1.14
COL25A1-201ENST00000399126 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.18■■□□□ 1.14
COL25A1-201ENST00000399126 AKNAQ7Z591 1439 aa22.17■■□□□ 1.14
COL25A1-201ENST00000399126 PREX2Q70Z35 1606 aa22.16■■□□□ 1.14
COL25A1-201ENST00000399126 SIN3AQ96ST3 1273 aa22.14■■□□□ 1.14
COL25A1-201ENST00000399126 CROCC2H7BZ55 1655 aa22.14■■□□□ 1.14
COL25A1-201ENST00000399126 ROCK1Q13464 1354 aa22.12■■□□□ 1.13
COL25A1-201ENST00000399126 SAMD9LQ8IVG5 1584 aa22.12■■□□□ 1.13
COL25A1-201ENST00000399126 HNRNPMP52272 730 aaKnown RBP eCLIP22.11■■□□□ 1.13
COL25A1-201ENST00000399126 NEUROD1Q13562 356 aa22.09■■□□□ 1.13
COL25A1-201ENST00000399126 MYO5CQ9NQX4 1742 aa22.09■■□□□ 1.13
COL25A1-201ENST00000399126 ARHGAP5Q13017 1502 aa22.08■■□□□ 1.13
COL25A1-201ENST00000399126 ADGBQ8N7X0 1667 aa22.08■■□□□ 1.13
COL25A1-201ENST00000399126 NCOA1Q15788 1441 aa22.07■■□□□ 1.12
COL25A1-201ENST00000399126 TRIM52Q96A61 297 aa22.07■■□□□ 1.12
COL25A1-201ENST00000399126 SCAF1Q9H7N4 1312 aaKnown RBP22.07■■□□□ 1.12
COL25A1-201ENST00000399126 MBD5Q9P267 1494 aa22.06■■□□□ 1.12
COL25A1-201ENST00000399126 DENND4BO75064 1496 aaPredicted RBP22.05■■□□□ 1.12
COL25A1-201ENST00000399126 ADGRL2O95490 1459 aa22.03■■□□□ 1.12
COL25A1-201ENST00000399126 SYCP2Q9BX26 1530 aa22.03■■□□□ 1.12
COL25A1-201ENST00000399126 C9orf84Q5VXU9 1444 aa22.03■■□□□ 1.12
COL25A1-201ENST00000399126 WDR7Q9Y4E6 1490 aa22.02■■□□□ 1.12
COL25A1-201ENST00000399126 ARHGEF5Q12774 1597 aa22.01■■□□□ 1.11
COL25A1-201ENST00000399126 SHANK2Q9UPX8 1470 aa21.99■■□□□ 1.11
COL25A1-201ENST00000399126 ANKRD30AQ9BXX3 1397 aa21.99■■□□□ 1.11
COL25A1-201ENST00000399126 NCBP3Q53F19 620 aaKnown RBP21.99■■□□□ 1.11
COL25A1-201ENST00000399126 PLCH2O75038 1416 aa21.98■■□□□ 1.11
COL25A1-201ENST00000399126 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
COL25A1-201ENST00000399126 ASXL2Q76L83 1435 aa21.98■■□□□ 1.11
COL25A1-201ENST00000399126 CCDC141Q6ZP82 1450 aa21.98■■□□□ 1.11
COL25A1-201ENST00000399126 TSPY4P0CV99 314 aa21.97■■□□□ 1.11
COL25A1-201ENST00000399126 TSPY10P0CW01 314 aa21.97■■□□□ 1.11
COL25A1-201ENST00000399126 FOXD1Q16676 465 aa21.97■■□□□ 1.11
COL25A1-201ENST00000399126 MPHOSPH9Q99550 1183 aa21.97■■□□□ 1.11
COL25A1-201ENST00000399126 ARHGEF12Q9NZN5 1544 aa21.97■■□□□ 1.11
COL25A1-201ENST00000399126 RTN4Q9NQC3 1192 aaKnown RBP21.95■■□□□ 1.1
COL25A1-201ENST00000399126 ANKRD50Q9ULJ7 1429 aa21.93■■□□□ 1.1
COL25A1-201ENST00000399126 KIF15Q9NS87 1388 aa21.91■■□□□ 1.1
COL25A1-201ENST00000399126 EFCAB2Q5VUJ9 269 aa21.9■■□□□ 1.1
COL25A1-201ENST00000399126 ABCA9Q8IUA7 1624 aa21.89■■□□□ 1.1
COL25A1-201ENST00000399126 KIAA1107Q9UPP5 1409 aa21.89■■□□□ 1.09
COL25A1-201ENST00000399126 NPM1P06748 294 aaKnown RBP eCLIP21.89■■□□□ 1.09
COL25A1-201ENST00000399126 PZPP20742 1482 aa21.89■■□□□ 1.09
COL25A1-201ENST00000399126 ABCC1P33527 1531 aa21.89■■□□□ 1.09
COL25A1-201ENST00000399126 SLC4A1APQ9BWU0 796 aaKnown RBP21.88■■□□□ 1.09
COL25A1-201ENST00000399126 PLEKHH2Q8IVE3 1493 aa21.87■■□□□ 1.09
COL25A1-201ENST00000399126 RSPH4AQ5TD94 716 aa21.86■■□□□ 1.09
COL25A1-201ENST00000399126 TRAPPC8Q9Y2L5 1435 aa21.86■■□□□ 1.09
COL25A1-201ENST00000399126 DIEXFQ68CQ4 756 aaKnown RBP21.86■■□□□ 1.09
COL25A1-201ENST00000399126 CYB5RLQ6IPT4 315 aa21.85■■□□□ 1.09
COL25A1-201ENST00000399126 RIMBP3CA6NJZ7 1639 aa21.84■■□□□ 1.09
COL25A1-201ENST00000399126 RIMBP3BA6NNM3 1639 aa21.84■■□□□ 1.09
COL25A1-201ENST00000399126 RIMBP3Q9UFD9 1639 aa21.84■■□□□ 1.09
COL25A1-201ENST00000399126 TONSLQ96HA7 1378 aa21.84■■□□□ 1.09
COL25A1-201ENST00000399126 MAST1Q9Y2H9 1570 aa21.84■■□□□ 1.09
COL25A1-201ENST00000399126 ARAP3Q8WWN8 1544 aa21.83■■□□□ 1.09
COL25A1-201ENST00000399126 FANCAO15360 1455 aa21.83■■□□□ 1.08
COL25A1-201ENST00000399126 TIMELESSQ9UNS1 1208 aa21.81■■□□□ 1.08
COL25A1-201ENST00000399126 PPP1R15AO75807 674 aaPredicted RBP21.81■■□□□ 1.08
COL25A1-201ENST00000399126 AFAP1Q8N556 730 aa21.81■■□□□ 1.08
COL25A1-201ENST00000399126 ANKRD30BQ9BXX2 1392 aa21.8■■□□□ 1.08
COL25A1-201ENST00000399126 NUP155O75694 1391 aa21.79■■□□□ 1.08
COL25A1-201ENST00000399126 PLXNC1O60486 1568 aa21.77■■□□□ 1.08
COL25A1-201ENST00000399126 PKD2Q13563 968 aa21.76■■□□□ 1.07
COL25A1-201ENST00000399126 ACIN1Q9UKV3 1341 aaKnown RBP21.76■■□□□ 1.07
COL25A1-201ENST00000399126 ADGRL1O94910 1474 aa21.74■■□□□ 1.07
COL25A1-201ENST00000399126 SCAPERQ9BY12 1400 aa21.72■■□□□ 1.07
COL25A1-201ENST00000399126 KDM5DQ9BY66 1539 aa21.72■■□□□ 1.07
COL25A1-201ENST00000399126 SPAG9O60271 1321 aaKnown RBP21.72■■□□□ 1.07
COL25A1-201ENST00000399126 ZFYVE16Q7Z3T8 1539 aa21.71■■□□□ 1.07
COL25A1-201ENST00000399126 CD109Q6YHK3 1445 aa21.71■■□□□ 1.07
COL25A1-201ENST00000399126 RPRD2Q5VT52 1461 aaKnown RBP21.7■■□□□ 1.06
COL25A1-201ENST00000399126 DUOX2Q9NRD8 1548 aa21.69■■□□□ 1.06
COL25A1-201ENST00000399126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.69■■□□□ 1.06
COL25A1-201ENST00000399126 L3MBTL2Q969R5 705 aa21.68■■□□□ 1.06
COL25A1-201ENST00000399126 FAM135AQ9P2D6 1515 aa21.67■■□□□ 1.06
COL25A1-201ENST00000399126 UNC13BO14795 1591 aa21.67■■□□□ 1.06
COL25A1-201ENST00000399126 HIRIP3Q9BW71 556 aaPredicted RBP21.66■■□□□ 1.06
COL25A1-201ENST00000399126 INO80Q9ULG1 1556 aaPredicted RBP21.65■■□□□ 1.06
COL25A1-201ENST00000399126 EIF5BO60841 1220 aaKnown RBP21.64■■□□□ 1.06
COL25A1-201ENST00000399126 ATP7AQ04656 1500 aa21.64■■□□□ 1.06
COL25A1-201ENST00000399126 TEX14Q8IWB6 1497 aa21.64■■□□□ 1.05
COL25A1-201ENST00000399126 ERBINQ96RT1 1412 aa21.63■■□□□ 1.05
COL25A1-201ENST00000399126 RTEL1-TNFRSF6BF6WH68 1400 aa21.63■■□□□ 1.05
COL25A1-201ENST00000399126 MYT1LQ9UL68 1186 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms