RNA–Protein interactions for RNA: ENST00000396101.7

LST1-212, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-212ENST00000396101 NESP48681 1621 aa19.55■□□□□ 0.72
LST1-212ENST00000396101 FBXO22Q8NEZ5 403 aa19.54■□□□□ 0.72
LST1-212ENST00000396101 MFRPQ9BY79 579 aa19.54■□□□□ 0.72
LST1-212ENST00000396101 L3MBTL3Q96JM7 780 aaPredicted RBP19.53■□□□□ 0.72
LST1-212ENST00000396101 AMER1Q5JTC6 1135 aaPredicted RBP19.51■□□□□ 0.71
LST1-212ENST00000396101 RTN4Q9NQC3 1192 aaKnown RBP19.49■□□□□ 0.71
LST1-212ENST00000396101 CHGAP10645 457 aaKnown RBP19.46■□□□□ 0.71
LST1-212ENST00000396101 NLRP6P59044 892 aa19.46■□□□□ 0.71
LST1-212ENST00000396101 BOLA1Q9Y3E2 137 aa19.46■□□□□ 0.71
LST1-212ENST00000396101 ERCC6Q03468 1493 aa19.46■□□□□ 0.71
LST1-212ENST00000396101 TMEM121BQ9BXQ6 578 aaPredicted RBP19.45■□□□□ 0.7
LST1-212ENST00000396101 DNAJC5Q9H3Z4 198 aa19.45■□□□□ 0.7
LST1-212ENST00000396101 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.41■□□□□ 0.7
LST1-212ENST00000396101 CADPSQ9ULU8 1353 aa19.41■□□□□ 0.7
LST1-212ENST00000396101 TOP2AP11388 1531 aaKnown RBP19.41■□□□□ 0.7
LST1-212ENST00000396101 SLAIN1Q8ND83 568 aa19.4■□□□□ 0.7
LST1-212ENST00000396101 C3orf67Q6ZVT6 689 aa19.37■□□□□ 0.69
LST1-212ENST00000396101 MICALL2Q8IY33 904 aa19.36■□□□□ 0.69
LST1-212ENST00000396101 LAMC3Q9Y6N6 1575 aa19.36■□□□□ 0.69
LST1-212ENST00000396101 NKX1-1Q15270 411 aaPredicted RBP19.34■□□□□ 0.69
LST1-212ENST00000396101 SUPT5HO00267 1087 aaKnown RBP19.33■□□□□ 0.68
LST1-212ENST00000396101 PDS5BQ9NTI5 1447 aa19.32■□□□□ 0.68
LST1-212ENST00000396101 CCDC88BA6NC98 1476 aa19.29■□□□□ 0.68
LST1-212ENST00000396101 G3V3G9 751 aa19.29■□□□□ 0.68
LST1-212ENST00000396101 LCE2DQ5TA82 110 aaPredicted RBP19.25■□□□□ 0.67
LST1-212ENST00000396101 CFTRP13569 1480 aa19.23■□□□□ 0.67
LST1-212ENST00000396101 PPP1R37O75864 691 aa19.22■□□□□ 0.67
LST1-212ENST00000396101 TMEM92Q6UXU6 159 aa19.22■□□□□ 0.67
LST1-212ENST00000396101 CUX2O14529 1486 aa19.19■□□□□ 0.66
LST1-212ENST00000396101 KIF21AQ7Z4S6 1674 aa19.18■□□□□ 0.66
LST1-212ENST00000396101 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
LST1-212ENST00000396101 THOC2Q8NI27 1593 aaKnown RBP19.11■□□□□ 0.65
LST1-212ENST00000396101 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
LST1-212ENST00000396101 FAM163AQ96GL9 167 aaPredicted RBP19.09■□□□□ 0.65
LST1-212ENST00000396101 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
LST1-212ENST00000396101 GTPBP6O43824 516 aaPredicted RBP19.08■□□□□ 0.64
LST1-212ENST00000396101 RYDENQ9NUL5 291 aaKnown RBP19.05■□□□□ 0.64
LST1-212ENST00000396101 SNPHO15079 494 aa19.04■□□□□ 0.64
LST1-212ENST00000396101 KIF3CO14782 793 aa19.03■□□□□ 0.64
LST1-212ENST00000396101 ST18O60284 1047 aa19.03■□□□□ 0.64
LST1-212ENST00000396101 HOXB3P14651 431 aaPredicted RBP19.02■□□□□ 0.64
LST1-212ENST00000396101 WDR62O43379 1518 aa18.98■□□□□ 0.63
LST1-212ENST00000396101 URB2Q14146 1524 aaKnown RBP18.96■□□□□ 0.63
LST1-212ENST00000396101 BBXQ8WY36 941 aaPredicted RBP18.96■□□□□ 0.63
LST1-212ENST00000396101 POTEMA6NI47 508 aa18.95■□□□□ 0.62
LST1-212ENST00000396101 C2orf72A6NCS6 295 aa18.94■□□□□ 0.62
LST1-212ENST00000396101 POTEGQ6S5H5 508 aa18.94■□□□□ 0.62
LST1-212ENST00000396101 PRDM2Q13029 1718 aa18.89■□□□□ 0.61
LST1-212ENST00000396101 DOK7Q18PE1 504 aa18.85■□□□□ 0.61
LST1-212ENST00000396101 TMC2Q8TDI7 906 aa18.83■□□□□ 0.6
LST1-212ENST00000396101 TOPBP1Q92547 1522 aa18.83■□□□□ 0.6
LST1-212ENST00000396101 GPHNQ9NQX3 736 aaPredicted RBP18.79■□□□□ 0.6
LST1-212ENST00000396101 ABCC8Q09428 1581 aa18.79■□□□□ 0.6
LST1-212ENST00000396101 CRISPLD2Q9H0B8 497 aa18.78■□□□□ 0.6
LST1-212ENST00000396101 MARVELD3Q96A59 401 aa18.76■□□□□ 0.59
LST1-212ENST00000396101 HOXB1P14653 301 aaPredicted RBP18.75■□□□□ 0.59
LST1-212ENST00000396101 FOXK1P85037 733 aa18.75■□□□□ 0.59
LST1-212ENST00000396101 NCKAP5LQ9HCH0 1330 aa18.74■□□□□ 0.59
LST1-212ENST00000396101 DNMBPQ6XZF7 1577 aa18.74■□□□□ 0.59
LST1-212ENST00000396101 ZNF710Q8N1W2 664 aa18.74■□□□□ 0.59
LST1-212ENST00000396101 ZSWIM6Q9HCJ5 1215 aa18.74■□□□□ 0.59
LST1-212ENST00000396101 GPR153Q6NV75 609 aa18.72■□□□□ 0.59
LST1-212ENST00000396101 RIMBP2O15034 1052 aa18.71■□□□□ 0.59
LST1-212ENST00000396101 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
LST1-212ENST00000396101 DSG2Q14126 1118 aa18.7■□□□□ 0.58
LST1-212ENST00000396101 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.7■□□□□ 0.58
LST1-212ENST00000396101 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
LST1-212ENST00000396101 SLC34A2O95436 690 aa18.69■□□□□ 0.58
LST1-212ENST00000396101 CADPS2Q86UW7 1296 aa18.69■□□□□ 0.58
LST1-212ENST00000396101 SPRYD3Q8NCJ5 442 aa18.68■□□□□ 0.58
LST1-212ENST00000396101 EMP3P54852 163 aa18.67■□□□□ 0.58
LST1-212ENST00000396101 CUX1P39880 1505 aa18.67■□□□□ 0.58
LST1-212ENST00000396101 SOGA1O94964 1423 aa18.66■□□□□ 0.58
LST1-212ENST00000396101 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
LST1-212ENST00000396101 RAD54L2Q9Y4B4 1467 aa18.66■□□□□ 0.58
LST1-212ENST00000396101 PLPP6Q8IY26 295 aa18.65■□□□□ 0.58
LST1-212ENST00000396101 AQRO60306 1485 aaKnown RBP eCLIP18.63■□□□□ 0.57
LST1-212ENST00000396101 POTEB3A0JP26 581 aa18.62■□□□□ 0.57
LST1-212ENST00000396101 POTEBQ6S5H4 581 aa18.62■□□□□ 0.57
LST1-212ENST00000396101 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
LST1-212ENST00000396101 TDRD9Q8NDG6 1382 aaKnown RBP18.61■□□□□ 0.57
LST1-212ENST00000396101 PDE4AP27815 886 aa18.6■□□□□ 0.57
LST1-212ENST00000396101 ARSIQ5FYB1 569 aa18.6■□□□□ 0.57
LST1-212ENST00000396101 PAXIP1Q6ZW49 1069 aaPredicted RBP18.6■□□□□ 0.57
LST1-212ENST00000396101 PCDH10Q9P2E7 1040 aa18.6■□□□□ 0.57
LST1-212ENST00000396101 MFSD10Q14728 455 aa18.59■□□□□ 0.57
LST1-212ENST00000396101 TARBP1Q13395 1621 aaKnown RBP18.59■□□□□ 0.57
LST1-212ENST00000396101 KHSRPQ92945 711 aaKnown RBP eCLIP18.58■□□□□ 0.56
LST1-212ENST00000396101 PPP1R15BQ5SWA1 713 aa18.57■□□□□ 0.56
LST1-212ENST00000396101 HS3ST6Q96QI5 342 aa18.56■□□□□ 0.56
LST1-212ENST00000396101 PCDHGA4Q9Y5G9 962 aa18.56■□□□□ 0.56
LST1-212ENST00000396101 FAM205CA6NFA0 338 aa18.55■□□□□ 0.56
LST1-212ENST00000396101 CDAN1Q8IWY9 1227 aa18.55■□□□□ 0.56
LST1-212ENST00000396101 PTCD2Q8WV60 388 aaKnown RBP18.55■□□□□ 0.56
LST1-212ENST00000396101 CFAP44Q96MT7 982 aa18.55■□□□□ 0.56
LST1-212ENST00000396101 WRNQ14191 1432 aaPredicted RBP eCLIP18.55■□□□□ 0.56
LST1-212ENST00000396101 LARP6Q9BRS8 491 aaKnown RBP18.52■□□□□ 0.56
LST1-212ENST00000396101 DDX27Q96GQ7 796 aaKnown RBP18.5■□□□□ 0.55
LST1-212ENST00000396101 EIF4G3O43432 1585 aaKnown RBP18.5■□□□□ 0.55
LST1-212ENST00000396101 KDM4FA0A1W2PPD8 638 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms