RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 CDK13Q14004 1512 aaKnown RBP32.9■■■□□ 2.86
UPK3B-203ENST00000394849 ATP10AO60312 1499 aa32.88■■■□□ 2.85
UPK3B-203ENST00000394849 MLECQ14165 292 aa32.88■■■□□ 2.85
UPK3B-203ENST00000394849 EFCAB2Q5VUJ9 269 aa32.87■■■□□ 2.85
UPK3B-203ENST00000394849 CDK11AQ9UQ88 783 aaPredicted RBP32.87■■■□□ 2.85
UPK3B-203ENST00000394849 C9orf84Q5VXU9 1444 aa32.85■■■□□ 2.85
UPK3B-203ENST00000394849 FMN1Q68DA7 1419 aa32.85■■■□□ 2.85
UPK3B-203ENST00000394849 ARHGEF12Q9NZN5 1544 aa32.84■■■□□ 2.85
UPK3B-203ENST00000394849 CERKQ8TCT0 537 aa32.84■■■□□ 2.85
UPK3B-203ENST00000394849 MYO5CQ9NQX4 1742 aa32.83■■■□□ 2.85
UPK3B-203ENST00000394849 PREX1Q8TCU6 1659 aa32.78■■■□□ 2.84
UPK3B-203ENST00000394849 ZNF518AQ6AHZ1 1483 aa32.77■■■□□ 2.84
UPK3B-203ENST00000394849 ATP1B4Q9UN42 357 aaPredicted RBP32.75■■■□□ 2.83
UPK3B-203ENST00000394849 DMRT2Q9Y5R5 561 aa32.74■■■□□ 2.83
UPK3B-203ENST00000394849 KIF14Q15058 1648 aa32.72■■■□□ 2.83
UPK3B-203ENST00000394849 SETD1BQ9UPS6 1966 aaKnown RBP32.71■■■□□ 2.83
UPK3B-203ENST00000394849 UBTFP17480 764 aaKnown RBP32.7■■■□□ 2.83
UPK3B-203ENST00000394849 CLIP1P30622 1438 aa32.68■■■□□ 2.82
UPK3B-203ENST00000394849 TROQ12816 1431 aaPredicted RBP32.68■■■□□ 2.82
UPK3B-203ENST00000394849 KDM5CP41229 1560 aa32.68■■■□□ 2.82
UPK3B-203ENST00000394849 ARHGAP5Q13017 1502 aa32.67■■■□□ 2.82
UPK3B-203ENST00000394849 ARHGAP35Q9NRY4 1499 aa32.65■■■□□ 2.82
UPK3B-203ENST00000394849 UHRF1BP1Q6BDS2 1440 aa32.64■■■□□ 2.82
UPK3B-203ENST00000394849 REREQ9P2R6 1566 aa32.63■■■□□ 2.81
UPK3B-203ENST00000394849 CEBPAP49715 358 aaPredicted RBP32.63■■■□□ 2.81
UPK3B-203ENST00000394849 AFAP1Q8N556 730 aa32.62■■■□□ 2.81
UPK3B-203ENST00000394849 MYT1LQ9UL68 1186 aa32.61■■■□□ 2.81
UPK3B-203ENST00000394849 STRCQ7RTU9 1775 aa32.58■■■□□ 2.81
UPK3B-203ENST00000394849 MLH3Q9UHC1 1453 aa32.57■■■□□ 2.8
UPK3B-203ENST00000394849 DIP2CQ9Y2E4 1556 aa32.57■■■□□ 2.8
UPK3B-203ENST00000394849 ESF1Q9H501 851 aaKnown RBP32.53■■■□□ 2.8
UPK3B-203ENST00000394849 AGLP35573 1532 aa32.52■■■□□ 2.8
UPK3B-203ENST00000394849 CDC42BPBQ9Y5S2 1711 aa32.51■■■□□ 2.8
UPK3B-203ENST00000394849 PTPRTO14522 1441 aa32.49■■■□□ 2.79
UPK3B-203ENST00000394849 ABCA6Q8N139 1617 aa32.48■■■□□ 2.79
UPK3B-203ENST00000394849 EHMT2Q96KQ7 1210 aa32.48■■■□□ 2.79
UPK3B-203ENST00000394849 C3P01024 1663 aa32.47■■■□□ 2.79
UPK3B-203ENST00000394849 LRRIQ1Q96JM4 1722 aa32.47■■■□□ 2.79
UPK3B-203ENST00000394849 PREX2Q70Z35 1606 aa32.47■■■□□ 2.79
UPK3B-203ENST00000394849 CCDC18Q5T9S5 1454 aa32.45■■■□□ 2.79
UPK3B-203ENST00000394849 ABCC1P33527 1531 aa32.45■■■□□ 2.78
UPK3B-203ENST00000394849 CNTLNQ9NXG0 1405 aa32.44■■■□□ 2.78
UPK3B-203ENST00000394849 TRAPPC8Q9Y2L5 1435 aa32.44■■■□□ 2.78
UPK3B-203ENST00000394849 ITSN2Q9NZM3 1697 aa32.4■■■□□ 2.78
UPK3B-203ENST00000394849 DISP3Q9P2K9 1392 aa32.39■■■□□ 2.78
UPK3B-203ENST00000394849 CASKIN1Q8WXD9 1431 aa32.39■■■□□ 2.78
UPK3B-203ENST00000394849 KIDINS220Q9ULH0 1771 aa32.35■■■□□ 2.77
UPK3B-203ENST00000394849 IQSEC2Q5JU85 1478 aa32.34■■■□□ 2.77
UPK3B-203ENST00000394849 CDC42BPAQ5VT25 1732 aa32.31■■■□□ 2.76
UPK3B-203ENST00000394849 NPATQ14207 1427 aa32.31■■■□□ 2.76
UPK3B-203ENST00000394849 NCOA1Q15788 1441 aa32.3■■■□□ 2.76
UPK3B-203ENST00000394849 MROH2AA6NES4 1674 aa32.29■■■□□ 2.76
UPK3B-203ENST00000394849 LTBP4Q8N2S1 1624 aa32.27■■■□□ 2.76
UPK3B-203ENST00000394849 SAMD9LQ8IVG5 1584 aa32.25■■■□□ 2.75
UPK3B-203ENST00000394849 SOCS7O14512 581 aa32.25■■■□□ 2.75
UPK3B-203ENST00000394849 FYCO1Q9BQS8 1478 aa32.23■■■□□ 2.75
UPK3B-203ENST00000394849 CHIC1Q5VXU3 224 aa32.22■■■□□ 2.75
UPK3B-203ENST00000394849 ILDR2Q71H61 639 aa32.22■■■□□ 2.75
UPK3B-203ENST00000394849 SPAG9O60271 1321 aaKnown RBP32.22■■■□□ 2.75
UPK3B-203ENST00000394849 ZMYM3Q14202 1370 aa32.2■■■□□ 2.75
UPK3B-203ENST00000394849 ZNF777Q9ULD5 760 aaPredicted RBP32.19■■■□□ 2.74
UPK3B-203ENST00000394849 CAMSAP1Q5T5Y3 1602 aa32.18■■■□□ 2.74
UPK3B-203ENST00000394849 PLEKHH2Q8IVE3 1493 aa32.17■■■□□ 2.74
UPK3B-203ENST00000394849 SPATA31D1Q6ZQQ2 1576 aa32.17■■■□□ 2.74
UPK3B-203ENST00000394849 KIAA1107Q9UPP5 1409 aa32.17■■■□□ 2.74
UPK3B-203ENST00000394849 SYCP2Q9BX26 1530 aa32.16■■■□□ 2.74
UPK3B-203ENST00000394849 GPATCH8Q9UKJ3 1502 aaKnown RBP32.16■■■□□ 2.74
UPK3B-203ENST00000394849 SUPT6HQ7KZ85 1726 aaKnown RBP32.13■■■□□ 2.73
UPK3B-203ENST00000394849 ATP7AQ04656 1500 aa32.12■■■□□ 2.73
UPK3B-203ENST00000394849 HNRNPMP52272 730 aaKnown RBP eCLIP32.11■■■□□ 2.73
UPK3B-203ENST00000394849 PKD2Q13563 968 aa32.11■■■□□ 2.73
UPK3B-203ENST00000394849 PPP6R1Q9UPN7 881 aa32.1■■■□□ 2.73
UPK3B-203ENST00000394849 PLA2R1Q13018 1463 aa32.1■■■□□ 2.73
UPK3B-203ENST00000394849 CFDP1Q9UEE9 299 aaPredicted RBP32.09■■■□□ 2.73
UPK3B-203ENST00000394849 PLXNC1O60486 1568 aa32.09■■■□□ 2.73
UPK3B-203ENST00000394849 A2MP01023 1474 aa32.09■■■□□ 2.73
UPK3B-203ENST00000394849 ZNF142P52746 1687 aaPredicted RBP32.08■■■□□ 2.73
UPK3B-203ENST00000394849 INO80Q9ULG1 1556 aaPredicted RBP32.07■■■□□ 2.72
UPK3B-203ENST00000394849 CLTCQ00610 1675 aaKnown RBP32.07■■■□□ 2.72
UPK3B-203ENST00000394849 CCNB3Q8WWL7 1395 aa32.05■■■□□ 2.72
UPK3B-203ENST00000394849 MYO3AQ8NEV4 1616 aa32.04■■■□□ 2.72
UPK3B-203ENST00000394849 NCKAP5LQ9HCH0 1330 aa32.04■■■□□ 2.72
UPK3B-203ENST00000394849 PTPRKQ15262 1439 aa32.03■■■□□ 2.72
UPK3B-203ENST00000394849 CEP170BQ9Y4F5 1589 aaPredicted RBP32.02■■■□□ 2.72
UPK3B-203ENST00000394849 TCOF1Q13428 1488 aaKnown RBP32■■■□□ 2.71
UPK3B-203ENST00000394849 ZNF335Q9H4Z2 1342 aaPredicted RBP32■■■□□ 2.71
UPK3B-203ENST00000394849 ADGBQ8N7X0 1667 aa31.99■■■□□ 2.71
UPK3B-203ENST00000394849 GGT6Q6P531 493 aa31.99■■■□□ 2.71
UPK3B-203ENST00000394849 UBAP1LF5GYI3 381 aa31.97■■■□□ 2.71
UPK3B-203ENST00000394849 MTUS2Q5JR59 1369 aa31.95■■■□□ 2.71
UPK3B-203ENST00000394849 RTEL1-TNFRSF6BF6WH68 1400 aa31.9■■■□□ 2.7
UPK3B-203ENST00000394849 A2ML1A8K2U0 1454 aa31.9■■■□□ 2.7
UPK3B-203ENST00000394849 MBD5Q9P267 1494 aa31.84■■■□□ 2.69
UPK3B-203ENST00000394849 DHX29Q7Z478 1369 aaKnown RBP31.83■■■□□ 2.69
UPK3B-203ENST00000394849 DNMT1P26358 1616 aaKnown RBP31.83■■■□□ 2.69
UPK3B-203ENST00000394849 TIAM1Q13009 1591 aa31.82■■■□□ 2.68
UPK3B-203ENST00000394849 FAM135AQ9P2D6 1515 aa31.82■■■□□ 2.68
UPK3B-203ENST00000394849 EHBP1L1Q8N3D4 1523 aa31.81■■■□□ 2.68
UPK3B-203ENST00000394849 ZNF644Q9H582 1327 aaPredicted RBP31.79■■■□□ 2.68
UPK3B-203ENST00000394849 CEP162Q5TB80 1403 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms