RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 KDM6BO15054 1643 aa21.95■■□□□ 1.1
UBE2D3-207ENST00000394801 ADCY10Q96PN6 1610 aa21.95■■□□□ 1.1
UBE2D3-207ENST00000394801 ABCA8O94911 1581 aa21.92■■□□□ 1.1
UBE2D3-207ENST00000394801 ITSN2Q9NZM3 1697 aa21.9■■□□□ 1.1
UBE2D3-207ENST00000394801 GPATCH8Q9UKJ3 1502 aaKnown RBP21.9■■□□□ 1.1
UBE2D3-207ENST00000394801 ZNF644Q9H582 1327 aaPredicted RBP21.9■■□□□ 1.1
UBE2D3-207ENST00000394801 KDM5BQ9UGL1 1544 aa21.89■■□□□ 1.1
UBE2D3-207ENST00000394801 MPHOSPH9Q99550 1183 aa21.88■■□□□ 1.09
UBE2D3-207ENST00000394801 TRIM52Q96A61 297 aa21.87■■□□□ 1.09
UBE2D3-207ENST00000394801 KIF14Q15058 1648 aa21.86■■□□□ 1.09
UBE2D3-207ENST00000394801 CFDP1Q9UEE9 299 aaPredicted RBP21.85■■□□□ 1.09
UBE2D3-207ENST00000394801 CAMSAP2Q08AD1 1489 aa21.85■■□□□ 1.09
UBE2D3-207ENST00000394801 ATP10BO94823 1461 aa21.84■■□□□ 1.09
UBE2D3-207ENST00000394801 PLEKHD1A6NEE1 506 aa21.81■■□□□ 1.08
UBE2D3-207ENST00000394801 MYT1Q01538 1121 aa21.81■■□□□ 1.08
UBE2D3-207ENST00000394801 DDX10Q13206 875 aaKnown RBP21.81■■□□□ 1.08
UBE2D3-207ENST00000394801 ADGRL2O95490 1459 aa21.79■■□□□ 1.08
UBE2D3-207ENST00000394801 NCOA1Q15788 1441 aa21.79■■□□□ 1.08
UBE2D3-207ENST00000394801 ABCC10Q5T3U5 1492 aa21.79■■□□□ 1.08
UBE2D3-207ENST00000394801 ADGBQ8N7X0 1667 aa21.77■■□□□ 1.08
UBE2D3-207ENST00000394801 ANKRD30BQ9BXX2 1392 aa21.76■■□□□ 1.07
UBE2D3-207ENST00000394801 PTPRGP23470 1445 aa21.76■■□□□ 1.07
UBE2D3-207ENST00000394801 CROCC2H7BZ55 1655 aa21.76■■□□□ 1.07
UBE2D3-207ENST00000394801 CDC42BPAQ5VT25 1732 aa21.75■■□□□ 1.07
UBE2D3-207ENST00000394801 HIRIP3Q9BW71 556 aaPredicted RBP21.74■■□□□ 1.07
UBE2D3-207ENST00000394801 CHD1O14646 1710 aa21.73■■□□□ 1.07
UBE2D3-207ENST00000394801 RPRD2Q5VT52 1461 aaKnown RBP21.72■■□□□ 1.07
UBE2D3-207ENST00000394801 SHROOM2Q13796 1616 aa21.71■■□□□ 1.07
UBE2D3-207ENST00000394801 ANKRD30AQ9BXX3 1397 aa21.69■■□□□ 1.06
UBE2D3-207ENST00000394801 ZNF777Q9ULD5 760 aaPredicted RBP21.69■■□□□ 1.06
UBE2D3-207ENST00000394801 SHANK2Q9UPX8 1470 aa21.69■■□□□ 1.06
UBE2D3-207ENST00000394801 PZPP20742 1482 aa21.69■■□□□ 1.06
UBE2D3-207ENST00000394801 FOXD1Q16676 465 aa21.68■■□□□ 1.06
UBE2D3-207ENST00000394801 SLC4A1APQ9BWU0 796 aaKnown RBP21.68■■□□□ 1.06
UBE2D3-207ENST00000394801 L3MBTL2Q969R5 705 aa21.68■■□□□ 1.06
UBE2D3-207ENST00000394801 KCNH8Q96L42 1107 aa21.64■■□□□ 1.05
UBE2D3-207ENST00000394801 CCER2I3L3R5 266 aa21.63■■□□□ 1.05
UBE2D3-207ENST00000394801 TEX14Q8IWB6 1497 aa21.63■■□□□ 1.05
UBE2D3-207ENST00000394801 ANKRD50Q9ULJ7 1429 aa21.62■■□□□ 1.05
UBE2D3-207ENST00000394801 ARHGEF5Q12774 1597 aa21.62■■□□□ 1.05
UBE2D3-207ENST00000394801 C9orf84Q5VXU9 1444 aa21.61■■□□□ 1.05
UBE2D3-207ENST00000394801 ANP32CO43423 234 aa21.6■■□□□ 1.05
UBE2D3-207ENST00000394801 HSPA5P11021 654 aaKnown RBP21.6■■□□□ 1.05
UBE2D3-207ENST00000394801 KIAA1107Q9UPP5 1409 aa21.59■■□□□ 1.05
UBE2D3-207ENST00000394801 MBD5Q9P267 1494 aa21.59■■□□□ 1.05
UBE2D3-207ENST00000394801 EIF4G2P78344 907 aaKnown RBP eCLIP21.59■■□□□ 1.05
UBE2D3-207ENST00000394801 TSPY4P0CV99 314 aa21.57■■□□□ 1.04
UBE2D3-207ENST00000394801 TSPY10P0CW01 314 aa21.57■■□□□ 1.04
UBE2D3-207ENST00000394801 PREX2Q70Z35 1606 aa21.57■■□□□ 1.04
UBE2D3-207ENST00000394801 CDC42BPBQ9Y5S2 1711 aa21.56■■□□□ 1.04
UBE2D3-207ENST00000394801 RSPH4AQ5TD94 716 aa21.55■■□□□ 1.04
UBE2D3-207ENST00000394801 ABCC2Q92887 1545 aa21.54■■□□□ 1.04
UBE2D3-207ENST00000394801 NBPF8Q3BBV2 869 aa21.54■■□□□ 1.04
UBE2D3-207ENST00000394801 WASHC2AQ641Q2 1341 aa21.54■■□□□ 1.04
UBE2D3-207ENST00000394801 KDM5DQ9BY66 1539 aa21.54■■□□□ 1.04
UBE2D3-207ENST00000394801 SAMD9LQ8IVG5 1584 aa21.53■■□□□ 1.04
UBE2D3-207ENST00000394801 ERCC6L2Q5T890 1561 aa21.52■■□□□ 1.04
UBE2D3-207ENST00000394801 HNRNPMP52272 730 aaKnown RBP eCLIP21.52■■□□□ 1.044e-13■■■■■ 32.7
UBE2D3-207ENST00000394801 PKD2Q13563 968 aa21.51■■□□□ 1.03
UBE2D3-207ENST00000394801 CCDC141Q6ZP82 1450 aa21.51■■□□□ 1.03
UBE2D3-207ENST00000394801 CLASP1Q7Z460 1538 aa21.49■■□□□ 1.03
UBE2D3-207ENST00000394801 KIF15Q9NS87 1388 aa21.49■■□□□ 1.03
UBE2D3-207ENST00000394801 SPATA31E1Q6ZUB1 1445 aa21.49■■□□□ 1.03
UBE2D3-207ENST00000394801 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.48■■□□□ 1.036e-33■□□□□ 10.7
UBE2D3-207ENST00000394801 NUP155O75694 1391 aa21.48■■□□□ 1.03
UBE2D3-207ENST00000394801 TTC37Q6PGP7 1564 aa21.46■■□□□ 1.03
UBE2D3-207ENST00000394801 UHRF1BP1LA0JNW5 1464 aa21.44■■□□□ 1.02
UBE2D3-207ENST00000394801 MAST1Q9Y2H9 1570 aa21.44■■□□□ 1.02
UBE2D3-207ENST00000394801 CCDC7Q96M83 1385 aa21.43■■□□□ 1.02
UBE2D3-207ENST00000394801 ARHGAP5Q13017 1502 aa21.41■■□□□ 1.02
UBE2D3-207ENST00000394801 PLEKHH2Q8IVE3 1493 aa21.41■■□□□ 1.02
UBE2D3-207ENST00000394801 C11orf95C9JLR9 678 aaPredicted RBP21.41■■□□□ 1.02
UBE2D3-207ENST00000394801 CNTLNQ9NXG0 1405 aa21.4■■□□□ 1.02
UBE2D3-207ENST00000394801 MYO5CQ9NQX4 1742 aa21.4■■□□□ 1.02
UBE2D3-207ENST00000394801 SYCP2Q9BX26 1530 aa21.4■■□□□ 1.02
UBE2D3-207ENST00000394801 UHRF1BP1Q6BDS2 1440 aa21.39■■□□□ 1.01
UBE2D3-207ENST00000394801 POLR1AO95602 1720 aaPredicted RBP21.38■■□□□ 1.01
UBE2D3-207ENST00000394801 ARHGEF12Q9NZN5 1544 aa21.37■■□□□ 1.01
UBE2D3-207ENST00000394801 SUPT16HQ9Y5B9 1047 aaKnown RBP21.37■■□□□ 1.01
UBE2D3-207ENST00000394801 ZCCHC11Q5TAX3 1644 aaKnown RBP21.36■■□□□ 1.01
UBE2D3-207ENST00000394801 PLCH2O75038 1416 aa21.35■■□□□ 1.01
UBE2D3-207ENST00000394801 PLXNC1O60486 1568 aa21.34■■□□□ 1.01
UBE2D3-207ENST00000394801 FAM135AQ9P2D6 1515 aa21.34■■□□□ 1.01
UBE2D3-207ENST00000394801 UNC13BO14795 1591 aa21.32■■□□□ 1
UBE2D3-207ENST00000394801 KIF7Q2M1P5 1343 aa21.32■■□□□ 1
UBE2D3-207ENST00000394801 RALGAPBQ86X10 1494 aa21.3■■□□□ 1
UBE2D3-207ENST00000394801 USP47Q96K76 1375 aa21.29■■□□□ 1
UBE2D3-207ENST00000394801 EFCAB2Q5VUJ9 269 aa21.28■■□□□ 1
UBE2D3-207ENST00000394801 KDM5CP41229 1560 aa21.28■■□□□ 1
UBE2D3-207ENST00000394801 ARID4BQ4LE39 1312 aaPredicted RBP21.27■■□□□ 1
UBE2D3-207ENST00000394801 DUOX2Q9NRD8 1548 aa21.27■□□□□ 0.99
UBE2D3-207ENST00000394801 PRKRIP1Q9H875 184 aaPredicted RBP21.26■□□□□ 0.99
UBE2D3-207ENST00000394801 ARAP3Q8WWN8 1544 aa21.25■□□□□ 0.99
UBE2D3-207ENST00000394801 IQGAP3Q86VI3 1631 aa21.24■□□□□ 0.99
UBE2D3-207ENST00000394801 ABCC1P33527 1531 aa21.24■□□□□ 0.99
UBE2D3-207ENST00000394801 ERBINQ96RT1 1412 aa21.24■□□□□ 0.99
UBE2D3-207ENST00000394801 MAGI2Q86UL8 1455 aa21.23■□□□□ 0.99
UBE2D3-207ENST00000394801 BCORL1Q5H9F3 1711 aa21.23■□□□□ 0.99
UBE2D3-207ENST00000394801 ZNF326Q5BKZ1 582 aaKnown RBP21.23■□□□□ 0.99
UBE2D3-207ENST00000394801 PLA2R1Q13018 1463 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms