RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 RRP7BPQ9NSQ0 103 aa26.44■■□□□ 1.82
TRAF3-203ENST00000392745 CFDP1Q9UEE9 299 aaPredicted RBP26.41■■□□□ 1.82
TRAF3-203ENST00000392745 SUPT16HQ9Y5B9 1047 aaKnown RBP26.41■■□□□ 1.82
TRAF3-203ENST00000392745 ITSN2Q9NZM3 1697 aa26.39■■□□□ 1.82
TRAF3-203ENST00000392745 DAPK1P53355 1430 aa26.38■■□□□ 1.81
TRAF3-203ENST00000392745 ABCC10Q5T3U5 1492 aa26.38■■□□□ 1.81
TRAF3-203ENST00000392745 ABCC5O15440 1437 aa26.37■■□□□ 1.81
TRAF3-203ENST00000392745 DNMT1P26358 1616 aaKnown RBP26.37■■□□□ 1.81
TRAF3-203ENST00000392745 CDC42BPAQ5VT25 1732 aa26.35■■□□□ 1.81
TRAF3-203ENST00000392745 CAMSAP2Q08AD1 1489 aa26.34■■□□□ 1.81
TRAF3-203ENST00000392745 GCC2Q8IWJ2 1684 aa26.34■■□□□ 1.81
TRAF3-203ENST00000392745 AKNAQ7Z591 1439 aa26.34■■□□□ 1.81
TRAF3-203ENST00000392745 SIN3AQ96ST3 1273 aa26.33■■□□□ 1.81
TRAF3-203ENST00000392745 ABCC2Q92887 1545 aa26.33■■□□□ 1.81
TRAF3-203ENST00000392745 ZNF777Q9ULD5 760 aaPredicted RBP26.33■■□□□ 1.81
TRAF3-203ENST00000392745 KDM6BO15054 1643 aa26.31■■□□□ 1.8
TRAF3-203ENST00000392745 ROCK1Q13464 1354 aa26.27■■□□□ 1.8
TRAF3-203ENST00000392745 UHRF1BP1LA0JNW5 1464 aa26.21■■□□□ 1.79
TRAF3-203ENST00000392745 TRIM52Q96A61 297 aa26.19■■□□□ 1.78
TRAF3-203ENST00000392745 CDC42BPBQ9Y5S2 1711 aa26.18■■□□□ 1.78
TRAF3-203ENST00000392745 ZCCHC11Q5TAX3 1644 aaKnown RBP26.18■■□□□ 1.78
TRAF3-203ENST00000392745 CROCC2H7BZ55 1655 aa26.17■■□□□ 1.78
TRAF3-203ENST00000392745 KDM5BQ9UGL1 1544 aa26.17■■□□□ 1.78
TRAF3-203ENST00000392745 NCOA1Q15788 1441 aa26.16■■□□□ 1.78
TRAF3-203ENST00000392745 OSCARQ8IYS5 282 aa26.16■■□□□ 1.78
TRAF3-203ENST00000392745 DENND4BO75064 1496 aaPredicted RBP26.16■■□□□ 1.78
TRAF3-203ENST00000392745 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.15■■□□□ 1.783e-14■■■■■ 27.4
TRAF3-203ENST00000392745 TSHZ2Q9NRE2 1034 aa26.14■■□□□ 1.78
TRAF3-203ENST00000392745 TTC37Q6PGP7 1564 aa26.14■■□□□ 1.78
TRAF3-203ENST00000392745 PREX2Q70Z35 1606 aa26.14■■□□□ 1.77
TRAF3-203ENST00000392745 KCNH8Q96L42 1107 aa26.13■■□□□ 1.77
TRAF3-203ENST00000392745 ADGBQ8N7X0 1667 aa26.13■■□□□ 1.77
TRAF3-203ENST00000392745 HNRNPMP52272 730 aaKnown RBP eCLIP26.12■■□□□ 1.774e-6■■■■□ 21.4
TRAF3-203ENST00000392745 TIMELESSQ9UNS1 1208 aa26.12■■□□□ 1.77
TRAF3-203ENST00000392745 ADGRL2O95490 1459 aa26.12■■□□□ 1.77
TRAF3-203ENST00000392745 MPHOSPH9Q99550 1183 aa26.1■■□□□ 1.77
TRAF3-203ENST00000392745 SAMD9LQ8IVG5 1584 aa26.1■■□□□ 1.77
TRAF3-203ENST00000392745 MBD5Q9P267 1494 aa26.08■■□□□ 1.77
TRAF3-203ENST00000392745 ANKRD30AQ9BXX3 1397 aa26.06■■□□□ 1.76
TRAF3-203ENST00000392745 C9orf84Q5VXU9 1444 aa26.04■■□□□ 1.76
TRAF3-203ENST00000392745 SHANK2Q9UPX8 1470 aa26.04■■□□□ 1.76
TRAF3-203ENST00000392745 ARHGEF5Q12774 1597 aa26.04■■□□□ 1.76
TRAF3-203ENST00000392745 MYO5CQ9NQX4 1742 aa26.03■■□□□ 1.76
TRAF3-203ENST00000392745 ARHGAP5Q13017 1502 aa26.03■■□□□ 1.76
TRAF3-203ENST00000392745 PPP1R15AO75807 674 aaPredicted RBP26.03■■□□□ 1.76
TRAF3-203ENST00000392745 TSPY4P0CV99 314 aa26.03■■□□□ 1.76
TRAF3-203ENST00000392745 TSPY10P0CW01 314 aa26.03■■□□□ 1.76
TRAF3-203ENST00000392745 FOXD1Q16676 465 aa26.01■■□□□ 1.75
TRAF3-203ENST00000392745 TONSLQ96HA7 1378 aa25.99■■□□□ 1.75
TRAF3-203ENST00000392745 ANKRD50Q9ULJ7 1429 aa25.97■■□□□ 1.75
TRAF3-203ENST00000392745 CCDC141Q6ZP82 1450 aa25.97■■□□□ 1.75
TRAF3-203ENST00000392745 SYCP2Q9BX26 1530 aa25.97■■□□□ 1.75
TRAF3-203ENST00000392745 PLCH2O75038 1416 aa25.96■■□□□ 1.75
TRAF3-203ENST00000392745 RSPH4AQ5TD94 716 aa25.96■■□□□ 1.75
TRAF3-203ENST00000392745 SLC4A1APQ9BWU0 796 aaKnown RBP25.95■■□□□ 1.75
TRAF3-203ENST00000392745 PZPP20742 1482 aa25.93■■□□□ 1.74
TRAF3-203ENST00000392745 BCANQ96GW7 911 aa25.91■■□□□ 1.74
TRAF3-203ENST00000392745 KIAA1107Q9UPP5 1409 aa25.91■■□□□ 1.74
TRAF3-203ENST00000392745 WDR7Q9Y4E6 1490 aa25.91■■□□□ 1.74
TRAF3-203ENST00000392745 ANKRD30BQ9BXX2 1392 aa25.9■■□□□ 1.74
TRAF3-203ENST00000392745 KIF15Q9NS87 1388 aa25.9■■□□□ 1.74
TRAF3-203ENST00000392745 ARHGEF12Q9NZN5 1544 aa25.9■■□□□ 1.74
TRAF3-203ENST00000392745 ANP32EQ9BTT0 268 aa25.89■■□□□ 1.74
TRAF3-203ENST00000392745 EFCAB2Q5VUJ9 269 aa25.88■■□□□ 1.73
TRAF3-203ENST00000392745 PLEKHH2Q8IVE3 1493 aa25.87■■□□□ 1.73
TRAF3-203ENST00000392745 DDX10Q13206 875 aaKnown RBP25.86■■□□□ 1.73
TRAF3-203ENST00000392745 MAST1Q9Y2H9 1570 aa25.84■■□□□ 1.73
TRAF3-203ENST00000392745 ASXL2Q76L83 1435 aa25.83■■□□□ 1.73
TRAF3-203ENST00000392745 FKBP8Q14318 412 aa25.82■■□□□ 1.72
TRAF3-203ENST00000392745 NUP155O75694 1391 aa25.81■■□□□ 1.72
TRAF3-203ENST00000392745 ABCC1P33527 1531 aa25.8■■□□□ 1.72
TRAF3-203ENST00000392745 PKD2Q13563 968 aa25.8■■□□□ 1.72
TRAF3-203ENST00000392745 RPRD2Q5VT52 1461 aaKnown RBP25.79■■□□□ 1.72
TRAF3-203ENST00000392745 ARAP3Q8WWN8 1544 aa25.79■■□□□ 1.72
TRAF3-203ENST00000392745 ABCA9Q8IUA7 1624 aa25.78■■□□□ 1.72
TRAF3-203ENST00000392745 TRAPPC8Q9Y2L5 1435 aa25.77■■□□□ 1.72
TRAF3-203ENST00000392745 L3MBTL2Q969R5 705 aa25.77■■□□□ 1.72
TRAF3-203ENST00000392745 NPM1P06748 294 aaKnown RBP eCLIP25.76■■□□□ 1.71
TRAF3-203ENST00000392745 KDM5DQ9BY66 1539 aa25.75■■□□□ 1.71
TRAF3-203ENST00000392745 HIRIP3Q9BW71 556 aaPredicted RBP25.75■■□□□ 1.71
TRAF3-203ENST00000392745 PLXNC1O60486 1568 aa25.74■■□□□ 1.71
TRAF3-203ENST00000392745 AFAP1Q8N556 730 aa25.71■■□□□ 1.71
TRAF3-203ENST00000392745 FANCAO15360 1455 aa25.71■■□□□ 1.71
TRAF3-203ENST00000392745 TEX14Q8IWB6 1497 aa25.69■■□□□ 1.7
TRAF3-203ENST00000392745 DUOX2Q9NRD8 1548 aa25.66■■□□□ 1.7
TRAF3-203ENST00000392745 FAM135AQ9P2D6 1515 aa25.65■■□□□ 1.7
TRAF3-203ENST00000392745 SPAG9O60271 1321 aaKnown RBP25.64■■□□□ 1.7
TRAF3-203ENST00000392745 UNC13BO14795 1591 aa25.63■■□□□ 1.69
TRAF3-203ENST00000392745 NBPF8Q3BBV2 869 aa25.61■■□□□ 1.69
TRAF3-203ENST00000392745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.61■■□□□ 1.69
TRAF3-203ENST00000392745 RTEL1-TNFRSF6BF6WH68 1400 aa25.6■■□□□ 1.69
TRAF3-203ENST00000392745 ADGRL1O94910 1474 aa25.6■■□□□ 1.69
TRAF3-203ENST00000392745 SCAPERQ9BY12 1400 aa25.6■■□□□ 1.69
TRAF3-203ENST00000392745 ERBINQ96RT1 1412 aa25.6■■□□□ 1.69
TRAF3-203ENST00000392745 NEFLP07196 543 aa25.59■■□□□ 1.69
TRAF3-203ENST00000392745 ZFYVE16Q7Z3T8 1539 aa25.59■■□□□ 1.69
TRAF3-203ENST00000392745 RBM19Q9Y4C8 960 aaKnown RBP25.58■■□□□ 1.69
TRAF3-203ENST00000392745 CCER2I3L3R5 266 aa25.57■■□□□ 1.68
TRAF3-203ENST00000392745 CYB5RLQ6IPT4 315 aa25.57■■□□□ 1.68
TRAF3-203ENST00000392745 ANP32CO43423 234 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms