RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 NPM1P06748 294 aaKnown RBP eCLIP29.29■■■□□ 2.28
PTPN11-202ENST00000392597 PLEKHD1A6NEE1 506 aa29.27■■■□□ 2.28
PTPN11-202ENST00000392597 GPATCH8Q9UKJ3 1502 aaKnown RBP29.27■■■□□ 2.28
PTPN11-202ENST00000392597 DAPK1P53355 1430 aa29.27■■■□□ 2.28
PTPN11-202ENST00000392597 DIEXFQ68CQ4 756 aaKnown RBP29.26■■■□□ 2.27
PTPN11-202ENST00000392597 ROCK1Q13464 1354 aa29.26■■■□□ 2.27
PTPN11-202ENST00000392597 TIMELESSQ9UNS1 1208 aa29.22■■■□□ 2.27
PTPN11-202ENST00000392597 ABCC5O15440 1437 aa29.22■■■□□ 2.27
PTPN11-202ENST00000392597 ACIN1Q9UKV3 1341 aaKnown RBP29.22■■■□□ 2.27
PTPN11-202ENST00000392597 ABCC10Q5T3U5 1492 aa29.21■■■□□ 2.27
PTPN11-202ENST00000392597 CAMSAP2Q08AD1 1489 aa29.21■■■□□ 2.27
PTPN11-202ENST00000392597 CFDP1Q9UEE9 299 aaPredicted RBP29.19■■■□□ 2.26
PTPN11-202ENST00000392597 CDC42BPAQ5VT25 1732 aa29.17■■■□□ 2.26
PTPN11-202ENST00000392597 RRP7BPQ9NSQ0 103 aa29.17■■■□□ 2.26
PTPN11-202ENST00000392597 CHIC2Q9UKJ5 165 aa29.17■■■□□ 2.26
PTPN11-202ENST00000392597 ZNF644Q9H582 1327 aaPredicted RBP29.15■■■□□ 2.26
PTPN11-202ENST00000392597 ASXL2Q76L83 1435 aa29.14■■■□□ 2.26
PTPN11-202ENST00000392597 WDR7Q9Y4E6 1490 aa29.13■■■□□ 2.25
PTPN11-202ENST00000392597 CROCC2H7BZ55 1655 aa29.11■■■□□ 2.25
PTPN11-202ENST00000392597 ADGBQ8N7X0 1667 aa29.1■■■□□ 2.25
PTPN11-202ENST00000392597 KDM6BO15054 1643 aa29.08■■■□□ 2.25
PTPN11-202ENST00000392597 SIN3AQ96ST3 1273 aa29.08■■■□□ 2.25
PTPN11-202ENST00000392597 ADGRL2O95490 1459 aa29.07■■■□□ 2.24
PTPN11-202ENST00000392597 NEUROD1Q13562 356 aa29.02■■■□□ 2.24
PTPN11-202ENST00000392597 SHANK2Q9UPX8 1470 aa29.01■■■□□ 2.24
PTPN11-202ENST00000392597 PREX2Q70Z35 1606 aa29.01■■■□□ 2.23
PTPN11-202ENST00000392597 NCOA1Q15788 1441 aa29■■■□□ 2.23
PTPN11-202ENST00000392597 ZNF777Q9ULD5 760 aaPredicted RBP28.98■■■□□ 2.23
PTPN11-202ENST00000392597 ARHGEF5Q12774 1597 aa28.97■■■□□ 2.23
PTPN11-202ENST00000392597 DENND4BO75064 1496 aaPredicted RBP28.96■■■□□ 2.23
PTPN11-202ENST00000392597 CDC42BPBQ9Y5S2 1711 aa28.95■■■□□ 2.23
PTPN11-202ENST00000392597 TRIM52Q96A61 297 aa28.95■■■□□ 2.22
PTPN11-202ENST00000392597 KCNH8Q96L42 1107 aa28.95■■■□□ 2.22
PTPN11-202ENST00000392597 DIP2BQ9P265 1576 aa28.94■■■□□ 2.22
PTPN11-202ENST00000392597 ANKRD30AQ9BXX3 1397 aa28.94■■■□□ 2.22
PTPN11-202ENST00000392597 TONSLQ96HA7 1378 aa28.92■■■□□ 2.22
PTPN11-202ENST00000392597 GLI2P10070 1586 aa28.91■■■□□ 2.22
PTPN11-202ENST00000392597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.91■■■□□ 2.221e-7■■■□□ 18.4
PTPN11-202ENST00000392597 PPP1R15AO75807 674 aaPredicted RBP28.91■■■□□ 2.22
PTPN11-202ENST00000392597 MPHOSPH9Q99550 1183 aa28.91■■■□□ 2.22
PTPN11-202ENST00000392597 ABCA9Q8IUA7 1624 aa28.9■■■□□ 2.22
PTPN11-202ENST00000392597 TTC37Q6PGP7 1564 aa28.89■■■□□ 2.22
PTPN11-202ENST00000392597 SAMD9LQ8IVG5 1584 aa28.88■■■□□ 2.21
PTPN11-202ENST00000392597 C9orf84Q5VXU9 1444 aa28.88■■■□□ 2.21
PTPN11-202ENST00000392597 MBD5Q9P267 1494 aa28.87■■■□□ 2.21
PTPN11-202ENST00000392597 KIF13AQ9H1H9 1805 aa28.86■■■□□ 2.21
PTPN11-202ENST00000392597 MYO5CQ9NQX4 1742 aa28.86■■■□□ 2.21
PTPN11-202ENST00000392597 RSPH4AQ5TD94 716 aa28.85■■■□□ 2.21
PTPN11-202ENST00000392597 FAM69CQ0P6D2 419 aa28.84■■■□□ 2.21
PTPN11-202ENST00000392597 CCDC141Q6ZP82 1450 aa28.83■■■□□ 2.21
PTPN11-202ENST00000392597 TSPY4P0CV99 314 aa28.81■■■□□ 2.2
PTPN11-202ENST00000392597 TSPY10P0CW01 314 aa28.81■■■□□ 2.2
PTPN11-202ENST00000392597 ARHGAP5Q13017 1502 aa28.81■■■□□ 2.2
PTPN11-202ENST00000392597 MAP3K4Q9Y6R4 1608 aa28.81■■■□□ 2.2
PTPN11-202ENST00000392597 PLEKHH2Q8IVE3 1493 aa28.8■■■□□ 2.2
PTPN11-202ENST00000392597 ANKRD50Q9ULJ7 1429 aa28.8■■■□□ 2.2
PTPN11-202ENST00000392597 PZPP20742 1482 aa28.77■■■□□ 2.2
PTPN11-202ENST00000392597 KIAA1107Q9UPP5 1409 aa28.77■■■□□ 2.2
PTPN11-202ENST00000392597 CD109Q6YHK3 1445 aa28.77■■■□□ 2.2
PTPN11-202ENST00000392597 ANKRD30BQ9BXX2 1392 aa28.76■■■□□ 2.19
PTPN11-202ENST00000392597 MAST1Q9Y2H9 1570 aa28.76■■■□□ 2.19
PTPN11-202ENST00000392597 HNRNPMP52272 730 aaKnown RBP eCLIP28.75■■■□□ 2.19
PTPN11-202ENST00000392597 ARAP3Q8WWN8 1544 aa28.74■■■□□ 2.19
PTPN11-202ENST00000392597 PLCH2O75038 1416 aa28.74■■■□□ 2.19
PTPN11-202ENST00000392597 SLC4A1APQ9BWU0 796 aaKnown RBP28.73■■■□□ 2.19
PTPN11-202ENST00000392597 SYCP2Q9BX26 1530 aa28.73■■■□□ 2.19
PTPN11-202ENST00000392597 TRHP20396 242 aaPredicted RBP28.72■■■□□ 2.19
PTPN11-202ENST00000392597 KIF15Q9NS87 1388 aa28.7■■■□□ 2.19
PTPN11-202ENST00000392597 KDM5DQ9BY66 1539 aa28.7■■■□□ 2.18
PTPN11-202ENST00000392597 RPRD2Q5VT52 1461 aaKnown RBP28.7■■■□□ 2.18
PTPN11-202ENST00000392597 MIER1Q8N108 512 aa28.69■■■□□ 2.18
PTPN11-202ENST00000392597 PPRC1Q5VV67 1664 aaKnown RBP28.64■■■□□ 2.18
PTPN11-202ENST00000392597 TSPOAP1O95153 1857 aa28.64■■■□□ 2.18
PTPN11-202ENST00000392597 PLXNC1O60486 1568 aa28.64■■■□□ 2.17
PTPN11-202ENST00000392597 FANCAO15360 1455 aa28.63■■■□□ 2.17
PTPN11-202ENST00000392597 FOXD1Q16676 465 aa28.63■■■□□ 2.17
PTPN11-202ENST00000392597 EFCAB2Q5VUJ9 269 aa28.63■■■□□ 2.17
PTPN11-202ENST00000392597 TEX14Q8IWB6 1497 aa28.63■■■□□ 2.17
PTPN11-202ENST00000392597 CFAP74Q9C0B2 1584 aa28.61■■■□□ 2.17
PTPN11-202ENST00000392597 ABCC1P33527 1531 aa28.6■■■□□ 2.17
PTPN11-202ENST00000392597 NEO1Q92859 1461 aa28.58■■■□□ 2.17
PTPN11-202ENST00000392597 ARHGEF12Q9NZN5 1544 aa28.57■■■□□ 2.16
PTPN11-202ENST00000392597 NUP155O75694 1391 aa28.56■■■□□ 2.16
PTPN11-202ENST00000392597 L3MBTL2Q969R5 705 aa28.53■■■□□ 2.16
PTPN11-202ENST00000392597 PKD2Q13563 968 aa28.53■■■□□ 2.16
PTPN11-202ENST00000392597 UNC13BO14795 1591 aa28.51■■■□□ 2.15
PTPN11-202ENST00000392597 DUOX2Q9NRD8 1548 aa28.51■■■□□ 2.15
PTPN11-202ENST00000392597 CENPBP07199 599 aaPredicted RBP28.49■■■□□ 2.15
PTPN11-202ENST00000392597 ADGRL1O94910 1474 aa28.48■■■□□ 2.15
PTPN11-202ENST00000392597 ERBINQ96RT1 1412 aa28.46■■■□□ 2.15
PTPN11-202ENST00000392597 FAM135AQ9P2D6 1515 aa28.45■■■□□ 2.15
PTPN11-202ENST00000392597 RTEL1-TNFRSF6BF6WH68 1400 aa28.44■■■□□ 2.14
PTPN11-202ENST00000392597 TRAPPC8Q9Y2L5 1435 aa28.43■■■□□ 2.14
PTPN11-202ENST00000392597 SCAPERQ9BY12 1400 aa28.42■■■□□ 2.14
PTPN11-202ENST00000392597 MAGI2Q86UL8 1455 aa28.4■■■□□ 2.14
PTPN11-202ENST00000392597 IQGAP3Q86VI3 1631 aa28.39■■■□□ 2.14
PTPN11-202ENST00000392597 ZFYVE16Q7Z3T8 1539 aa28.37■■■□□ 2.13
PTPN11-202ENST00000392597 POGZQ7Z3K3 1410 aa28.36■■■□□ 2.13
PTPN11-202ENST00000392597 ZNF518AQ6AHZ1 1483 aa28.35■■■□□ 2.13
PTPN11-202ENST00000392597 SPAG9O60271 1321 aaKnown RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms