RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 CDC42BPAQ5VT25 1732 aa28.13■■■□□ 2.09
GMDS-201ENST00000380805 DIEXFQ68CQ4 756 aaKnown RBP28.11■■■□□ 2.09
GMDS-201ENST00000380805 ABCC5O15440 1437 aa28.11■■■□□ 2.09
GMDS-201ENST00000380805 CAMSAP2Q08AD1 1489 aa28.1■■■□□ 2.09
GMDS-201ENST00000380805 CROCC2H7BZ55 1655 aa28.09■■■□□ 2.09
GMDS-201ENST00000380805 TIMELESSQ9UNS1 1208 aa28.09■■■□□ 2.09
GMDS-201ENST00000380805 ADGBQ8N7X0 1667 aa28.06■■■□□ 2.08
GMDS-201ENST00000380805 ABCC2Q92887 1545 aa28.06■■■□□ 2.08
GMDS-201ENST00000380805 PLEKHD1A6NEE1 506 aa28.05■■■□□ 2.08
GMDS-201ENST00000380805 KDM6BO15054 1643 aa28.04■■■□□ 2.08
GMDS-201ENST00000380805 ACIN1Q9UKV3 1341 aaKnown RBP28.04■■■□□ 2.08
GMDS-201ENST00000380805 UHRF1BP1LA0JNW5 1464 aa28.03■■■□□ 2.08
GMDS-201ENST00000380805 ADGRL2O95490 1459 aa28■■■□□ 2.07
GMDS-201ENST00000380805 ZNF644Q9H582 1327 aaPredicted RBP27.99■■■□□ 2.07
GMDS-201ENST00000380805 CFDP1Q9UEE9 299 aaPredicted RBP27.98■■■□□ 2.07
GMDS-201ENST00000380805 RRP7BPQ9NSQ0 103 aa27.97■■■□□ 2.07
GMDS-201ENST00000380805 PREX2Q70Z35 1606 aa27.96■■■□□ 2.07
GMDS-201ENST00000380805 CHIC2Q9UKJ5 165 aa27.95■■■□□ 2.06
GMDS-201ENST00000380805 DENND4BO75064 1496 aaPredicted RBP27.95■■■□□ 2.06
GMDS-201ENST00000380805 SHANK2Q9UPX8 1470 aa27.95■■■□□ 2.06
GMDS-201ENST00000380805 KDM5BQ9UGL1 1544 aa27.92■■■□□ 2.06
GMDS-201ENST00000380805 SIN3AQ96ST3 1273 aa27.92■■■□□ 2.06
GMDS-201ENST00000380805 ARHGEF5Q12774 1597 aa27.91■■■□□ 2.06
GMDS-201ENST00000380805 CDC42BPBQ9Y5S2 1711 aa27.91■■■□□ 2.06
GMDS-201ENST00000380805 NPM1P06748 294 aaKnown RBP eCLIP27.9■■■□□ 2.06
GMDS-201ENST00000380805 ZCCHC11Q5TAX3 1644 aaKnown RBP27.89■■■□□ 2.06
GMDS-201ENST00000380805 NCOA1Q15788 1441 aa27.89■■■□□ 2.05
GMDS-201ENST00000380805 TTC37Q6PGP7 1564 aa27.83■■■□□ 2.05
GMDS-201ENST00000380805 SAMD9LQ8IVG5 1584 aa27.83■■■□□ 2.05
GMDS-201ENST00000380805 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.83■■■□□ 2.05
GMDS-201ENST00000380805 MYO5CQ9NQX4 1742 aa27.81■■■□□ 2.04
GMDS-201ENST00000380805 NEUROD1Q13562 356 aa27.81■■■□□ 2.04
GMDS-201ENST00000380805 MBD5Q9P267 1494 aa27.79■■■□□ 2.04
GMDS-201ENST00000380805 ANKRD30AQ9BXX3 1397 aa27.79■■■□□ 2.04
GMDS-201ENST00000380805 PPP1R15AO75807 674 aaPredicted RBP27.78■■■□□ 2.04
GMDS-201ENST00000380805 ASXL2Q76L83 1435 aa27.76■■■□□ 2.03
GMDS-201ENST00000380805 TONSLQ96HA7 1378 aa27.76■■■□□ 2.03
GMDS-201ENST00000380805 MPHOSPH9Q99550 1183 aa27.75■■■□□ 2.03
GMDS-201ENST00000380805 C9orf84Q5VXU9 1444 aa27.75■■■□□ 2.03
GMDS-201ENST00000380805 ZNF777Q9ULD5 760 aaPredicted RBP27.75■■■□□ 2.03
GMDS-201ENST00000380805 MAST1Q9Y2H9 1570 aa27.73■■■□□ 2.03
GMDS-201ENST00000380805 CCDC141Q6ZP82 1450 aa27.72■■■□□ 2.03
GMDS-201ENST00000380805 TRIM52Q96A61 297 aa27.72■■■□□ 2.03
GMDS-201ENST00000380805 PZPP20742 1482 aa27.71■■■□□ 2.03
GMDS-201ENST00000380805 RSPH4AQ5TD94 716 aa27.68■■■□□ 2.02
GMDS-201ENST00000380805 KCNH8Q96L42 1107 aa27.68■■■□□ 2.02
GMDS-201ENST00000380805 KDM5DQ9BY66 1539 aa27.68■■■□□ 2.02
GMDS-201ENST00000380805 PLEKHH2Q8IVE3 1493 aa27.68■■■□□ 2.02
GMDS-201ENST00000380805 WDR7Q9Y4E6 1490 aa27.68■■■□□ 2.02
GMDS-201ENST00000380805 ARHGAP5Q13017 1502 aa27.67■■■□□ 2.02
GMDS-201ENST00000380805 ANKRD50Q9ULJ7 1429 aa27.67■■■□□ 2.02
GMDS-201ENST00000380805 KIAA1107Q9UPP5 1409 aa27.66■■■□□ 2.02
GMDS-201ENST00000380805 ANKRD30BQ9BXX2 1392 aa27.66■■■□□ 2.02
GMDS-201ENST00000380805 ARAP3Q8WWN8 1544 aa27.65■■■□□ 2.02
GMDS-201ENST00000380805 SYCP2Q9BX26 1530 aa27.64■■■□□ 2.02
GMDS-201ENST00000380805 RPRD2Q5VT52 1461 aaKnown RBP27.63■■■□□ 2.01
GMDS-201ENST00000380805 PLCH2O75038 1416 aa27.62■■■□□ 2.01
GMDS-201ENST00000380805 PLXNC1O60486 1568 aa27.6■■■□□ 2.01
GMDS-201ENST00000380805 TSPY4P0CV99 314 aa27.6■■■□□ 2.01
GMDS-201ENST00000380805 TSPY10P0CW01 314 aa27.6■■■□□ 2.01
GMDS-201ENST00000380805 HNRNPMP52272 730 aaKnown RBP eCLIP27.57■■■□□ 29e-7■■■□□ 19
GMDS-201ENST00000380805 MIER1Q8N108 512 aa27.57■■■□□ 2
GMDS-201ENST00000380805 KIF15Q9NS87 1388 aa27.57■■■□□ 2
GMDS-201ENST00000380805 FAM69CQ0P6D2 419 aa27.56■■■□□ 2
GMDS-201ENST00000380805 ABCC1P33527 1531 aa27.55■■■□□ 2
GMDS-201ENST00000380805 DIP2BQ9P265 1576 aa27.55■■■□□ 2
GMDS-201ENST00000380805 SLC4A1APQ9BWU0 796 aaKnown RBP27.55■■■□□ 2
GMDS-201ENST00000380805 TEX14Q8IWB6 1497 aa27.54■■■□□ 2
GMDS-201ENST00000380805 TRHP20396 242 aaPredicted RBP27.54■■■□□ 2
GMDS-201ENST00000380805 KIF13AQ9H1H9 1805 aa27.52■■■□□ 2
GMDS-201ENST00000380805 ABCA9Q8IUA7 1624 aa27.51■■□□□ 1.99
GMDS-201ENST00000380805 ARHGEF12Q9NZN5 1544 aa27.51■■□□□ 1.99
GMDS-201ENST00000380805 UNC13BO14795 1591 aa27.49■■□□□ 1.99
GMDS-201ENST00000380805 GLI2P10070 1586 aa27.46■■□□□ 1.99
GMDS-201ENST00000380805 FOXD1Q16676 465 aa27.46■■□□□ 1.99
GMDS-201ENST00000380805 EFCAB2Q5VUJ9 269 aa27.44■■□□□ 1.98
GMDS-201ENST00000380805 DUOX2Q9NRD8 1548 aa27.42■■□□□ 1.98
GMDS-201ENST00000380805 NUP155O75694 1391 aa27.42■■□□□ 1.98
GMDS-201ENST00000380805 L3MBTL2Q969R5 705 aa27.4■■□□□ 1.98
GMDS-201ENST00000380805 CD109Q6YHK3 1445 aa27.39■■□□□ 1.98
GMDS-201ENST00000380805 MAP3K4Q9Y6R4 1608 aa27.39■■□□□ 1.98
GMDS-201ENST00000380805 MAGI2Q86UL8 1455 aa27.38■■□□□ 1.97
GMDS-201ENST00000380805 FAM135AQ9P2D6 1515 aa27.38■■□□□ 1.97
GMDS-201ENST00000380805 ERBINQ96RT1 1412 aa27.37■■□□□ 1.97
GMDS-201ENST00000380805 TSPOAP1O95153 1857 aa27.37■■□□□ 1.97
GMDS-201ENST00000380805 IQGAP3Q86VI3 1631 aa27.37■■□□□ 1.97
GMDS-201ENST00000380805 PKD2Q13563 968 aa27.36■■□□□ 1.97
GMDS-201ENST00000380805 RTEL1-TNFRSF6BF6WH68 1400 aa27.35■■□□□ 1.97
GMDS-201ENST00000380805 CENPBP07199 599 aaPredicted RBP27.34■■□□□ 1.97
GMDS-201ENST00000380805 TRAPPC8Q9Y2L5 1435 aa27.33■■□□□ 1.97
GMDS-201ENST00000380805 ZFYVE16Q7Z3T8 1539 aa27.32■■□□□ 1.96
GMDS-201ENST00000380805 PPRC1Q5VV67 1664 aaKnown RBP27.3■■□□□ 1.96
GMDS-201ENST00000380805 FANCAO15360 1455 aa27.29■■□□□ 1.96
GMDS-201ENST00000380805 INO80Q9ULG1 1556 aaPredicted RBP27.29■■□□□ 1.96
GMDS-201ENST00000380805 UHRF1BP1Q6BDS2 1440 aa27.23■■□□□ 1.95
GMDS-201ENST00000380805 DEPDC5O75140 1603 aa27.22■■□□□ 1.95
GMDS-201ENST00000380805 NBPF8Q3BBV2 869 aa27.21■■□□□ 1.95
GMDS-201ENST00000380805 CFAP74Q9C0B2 1584 aa27.21■■□□□ 1.95
GMDS-201ENST00000380805 POLR1AO95602 1720 aaPredicted RBP27.21■■□□□ 1.95
GMDS-201ENST00000380805 ATP7AQ04656 1500 aa27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms