RNA–Protein interactions for RNA: ENST00000377881.6

TDRD3-202, Transcript of tudor domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TDRD3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-202ENST00000377881 TRIM52Q96A61 297 aa13.67□□□□□ -0.22
TDRD3-202ENST00000377881 CEP170Q5SW79 1584 aa13.67□□□□□ -0.22
TDRD3-202ENST00000377881 CROCC2H7BZ55 1655 aa13.66□□□□□ -0.22
TDRD3-202ENST00000377881 ABCC5O15440 1437 aa13.66□□□□□ -0.22
TDRD3-202ENST00000377881 CHIC2Q9UKJ5 165 aa13.65□□□□□ -0.22
TDRD3-202ENST00000377881 MPHOSPH9Q99550 1183 aa13.65□□□□□ -0.22
TDRD3-202ENST00000377881 MYT1Q01538 1121 aa13.64□□□□□ -0.23
TDRD3-202ENST00000377881 NUP160Q12769 1436 aa13.64□□□□□ -0.23
TDRD3-202ENST00000377881 RPRD2Q5VT52 1461 aaKnown RBP13.63□□□□□ -0.23
TDRD3-202ENST00000377881 POLR1AO95602 1720 aaPredicted RBP13.63□□□□□ -0.23
TDRD3-202ENST00000377881 ADGRL2O95490 1459 aa13.62□□□□□ -0.23
TDRD3-202ENST00000377881 CAMSAP2Q08AD1 1489 aa13.62□□□□□ -0.23
TDRD3-202ENST00000377881 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
TDRD3-202ENST00000377881 KCNH8Q96L42 1107 aa13.61□□□□□ -0.23
TDRD3-202ENST00000377881 EIF4G2P78344 907 aaKnown RBP eCLIP13.6□□□□□ -0.23
TDRD3-202ENST00000377881 ANKRD30BQ9BXX2 1392 aa13.6□□□□□ -0.23
TDRD3-202ENST00000377881 KIF14Q15058 1648 aa13.59□□□□□ -0.23
TDRD3-202ENST00000377881 HIRIP3Q9BW71 556 aaPredicted RBP13.59□□□□□ -0.23
TDRD3-202ENST00000377881 GPATCH8Q9UKJ3 1502 aaKnown RBP13.59□□□□□ -0.23
TDRD3-202ENST00000377881 ABCA8O94911 1581 aa13.58□□□□□ -0.24
TDRD3-202ENST00000377881 TEX14Q8IWB6 1497 aa13.57□□□□□ -0.24
TDRD3-202ENST00000377881 SHANK2Q9UPX8 1470 aa13.57□□□□□ -0.24
TDRD3-202ENST00000377881 HSPA5P11021 654 aaKnown RBP13.57□□□□□ -0.24
TDRD3-202ENST00000377881 PRG4Q92954 1404 aaPredicted RBP13.57□□□□□ -0.24
TDRD3-202ENST00000377881 CFDP1Q9UEE9 299 aaPredicted RBP13.56□□□□□ -0.24
TDRD3-202ENST00000377881 PLB1Q6P1J6 1458 aa13.56□□□□□ -0.24
TDRD3-202ENST00000377881 CDC42BPAQ5VT25 1732 aa13.56□□□□□ -0.24
TDRD3-202ENST00000377881 CNTLNQ9NXG0 1405 aa13.56□□□□□ -0.24
TDRD3-202ENST00000377881 NEFLP07196 543 aa13.56□□□□□ -0.24
TDRD3-202ENST00000377881 NCOA1Q15788 1441 aa13.55□□□□□ -0.24
TDRD3-202ENST00000377881 ARID3CA6NKF2 412 aa13.55□□□□□ -0.24
TDRD3-202ENST00000377881 ANKRD30AQ9BXX3 1397 aa13.55□□□□□ -0.24
TDRD3-202ENST00000377881 L3MBTL2Q969R5 705 aa13.54□□□□□ -0.24
TDRD3-202ENST00000377881 PZPP20742 1482 aa13.54□□□□□ -0.24
TDRD3-202ENST00000377881 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
TDRD3-202ENST00000377881 JPH4Q96JJ6 628 aa13.53□□□□□ -0.24
TDRD3-202ENST00000377881 WASHC2AQ641Q2 1341 aa13.53□□□□□ -0.24
TDRD3-202ENST00000377881 KIAA1107Q9UPP5 1409 aa13.52□□□□□ -0.25
TDRD3-202ENST00000377881 ZNF644Q9H582 1327 aaPredicted RBP13.51□□□□□ -0.25
TDRD3-202ENST00000377881 ARHGEF5Q12774 1597 aa13.51□□□□□ -0.25
TDRD3-202ENST00000377881 ABCC10Q5T3U5 1492 aa13.51□□□□□ -0.25
TDRD3-202ENST00000377881 KDM5DQ9BY66 1539 aa13.51□□□□□ -0.25
TDRD3-202ENST00000377881 CCDC7Q96M83 1385 aa13.5□□□□□ -0.25
TDRD3-202ENST00000377881 PLEKHD1A6NEE1 506 aa13.5□□□□□ -0.25
TDRD3-202ENST00000377881 MBD5Q9P267 1494 aa13.5□□□□□ -0.25
TDRD3-202ENST00000377881 ATP10BO94823 1461 aa13.47□□□□□ -0.25
TDRD3-202ENST00000377881 SPATA31E1Q6ZUB1 1445 aa13.47□□□□□ -0.25
TDRD3-202ENST00000377881 ANKRD50Q9ULJ7 1429 aa13.47□□□□□ -0.25
TDRD3-202ENST00000377881 FKBP8Q14318 412 aa13.47□□□□□ -0.25
TDRD3-202ENST00000377881 FBLN2P98095 1184 aa13.46□□□□□ -0.25
TDRD3-202ENST00000377881 ARHGEF12Q9NZN5 1544 aa13.46□□□□□ -0.25
TDRD3-202ENST00000377881 C9orf84Q5VXU9 1444 aa13.45□□□□□ -0.26
TDRD3-202ENST00000377881 FOXD1Q16676 465 aa13.45□□□□□ -0.26
TDRD3-202ENST00000377881 PREX2Q70Z35 1606 aa13.45□□□□□ -0.26
TDRD3-202ENST00000377881 ARID4BQ4LE39 1312 aaPredicted RBP13.44□□□□□ -0.26
TDRD3-202ENST00000377881 NBPF8Q3BBV2 869 aa13.44□□□□□ -0.26
TDRD3-202ENST00000377881 UHRF1BP1Q6BDS2 1440 aa13.43□□□□□ -0.26
TDRD3-202ENST00000377881 PHF23Q9BUL5 403 aaPredicted RBP13.43□□□□□ -0.26
TDRD3-202ENST00000377881 ZNF777Q9ULD5 760 aaPredicted RBP13.43□□□□□ -0.26
TDRD3-202ENST00000377881 RSPH4AQ5TD94 716 aa13.42□□□□□ -0.26
TDRD3-202ENST00000377881 TSPY4P0CV99 314 aa13.41□□□□□ -0.26
TDRD3-202ENST00000377881 TSPY10P0CW01 314 aa13.41□□□□□ -0.26
TDRD3-202ENST00000377881 RALGAPBQ86X10 1494 aa13.41□□□□□ -0.26
TDRD3-202ENST00000377881 KDM5CP41229 1560 aa13.41□□□□□ -0.26
TDRD3-202ENST00000377881 MAST1Q9Y2H9 1570 aa13.41□□□□□ -0.26
TDRD3-202ENST00000377881 SHROOM2Q13796 1616 aa13.41□□□□□ -0.26
TDRD3-202ENST00000377881 HNRNPUQ00839 825 aaKnown RBP eCLIP13.41□□□□□ -0.26
TDRD3-202ENST00000377881 PRKRIP1Q9H875 184 aaPredicted RBP13.41□□□□□ -0.26
TDRD3-202ENST00000377881 TSHZ2Q9NRE2 1034 aa13.41□□□□□ -0.26
TDRD3-202ENST00000377881 PTPRGP23470 1445 aa13.4□□□□□ -0.26
TDRD3-202ENST00000377881 CCDC141Q6ZP82 1450 aa13.4□□□□□ -0.26
TDRD3-202ENST00000377881 CDC42BPBQ9Y5S2 1711 aa13.4□□□□□ -0.26
TDRD3-202ENST00000377881 ERICH6BQ5W0A0 696 aa13.4□□□□□ -0.26
TDRD3-202ENST00000377881 PKD2Q13563 968 aa13.4□□□□□ -0.26
TDRD3-202ENST00000377881 CHD1O14646 1710 aa13.4□□□□□ -0.27
TDRD3-202ENST00000377881 KIF7Q2M1P5 1343 aa13.39□□□□□ -0.27
TDRD3-202ENST00000377881 ROCK2O75116 1388 aaKnown RBP13.39□□□□□ -0.27
TDRD3-202ENST00000377881 SAMD9LQ8IVG5 1584 aa13.38□□□□□ -0.27
TDRD3-202ENST00000377881 NUP155O75694 1391 aa13.38□□□□□ -0.27
TDRD3-202ENST00000377881 USP47Q96K76 1375 aa13.37□□□□□ -0.27
TDRD3-202ENST00000377881 KIF15Q9NS87 1388 aa13.37□□□□□ -0.27
TDRD3-202ENST00000377881 PLEKHH2Q8IVE3 1493 aa13.37□□□□□ -0.27
TDRD3-202ENST00000377881 C11orf95C9JLR9 678 aaPredicted RBP13.36□□□□□ -0.27
TDRD3-202ENST00000377881 UNC13BO14795 1591 aa13.35□□□□□ -0.27
TDRD3-202ENST00000377881 MYO5CQ9NQX4 1742 aa13.35□□□□□ -0.27
TDRD3-202ENST00000377881 BCORL1Q5H9F3 1711 aa13.35□□□□□ -0.27
TDRD3-202ENST00000377881 PLXNC1O60486 1568 aa13.35□□□□□ -0.27
TDRD3-202ENST00000377881 BCANQ96GW7 911 aa13.35□□□□□ -0.27
TDRD3-202ENST00000377881 ZBED9Q6R2W3 1325 aa13.34□□□□□ -0.27
TDRD3-202ENST00000377881 MRS2Q9HD23 443 aa13.34□□□□□ -0.27
TDRD3-202ENST00000377881 FAM135AQ9P2D6 1515 aa13.32□□□□□ -0.28
TDRD3-202ENST00000377881 ABCC2Q92887 1545 aa13.32□□□□□ -0.28
TDRD3-202ENST00000377881 KTN1Q86UP2 1357 aaKnown RBP13.31□□□□□ -0.28
TDRD3-202ENST00000377881 ARHGAP5Q13017 1502 aa13.3□□□□□ -0.28
TDRD3-202ENST00000377881 LAMC1P11047 1609 aa13.3□□□□□ -0.28
TDRD3-202ENST00000377881 IQGAP3Q86VI3 1631 aa13.3□□□□□ -0.28
TDRD3-202ENST00000377881 DHX29Q7Z478 1369 aaKnown RBP13.3□□□□□ -0.28
TDRD3-202ENST00000377881 TTC37Q6PGP7 1564 aa13.3□□□□□ -0.28
TDRD3-202ENST00000377881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.29□□□□□ -0.28
TDRD3-202ENST00000377881 SYCP2Q9BX26 1530 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms