RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 EIF4G2P78344 907 aaKnown RBP eCLIP24.24■■□□□ 1.473e-7■■■■■ 34.2
CHUK-201ENST00000370397 MIA2Q96PC5 1412 aa24.24■■□□□ 1.47
CHUK-201ENST00000370397 TARBP1Q13395 1621 aaKnown RBP24.24■■□□□ 1.47
CHUK-201ENST00000370397 ANKRD30BQ9BXX2 1392 aa24.23■■□□□ 1.47
CHUK-201ENST00000370397 EPRSP07814 1512 aaKnown RBP24.23■■□□□ 1.47
CHUK-201ENST00000370397 L3MBTL2Q969R5 705 aa24.22■■□□□ 1.47
CHUK-201ENST00000370397 RRP7BPQ9NSQ0 103 aa24.22■■□□□ 1.47
CHUK-201ENST00000370397 BCORL1Q5H9F3 1711 aa24.21■■□□□ 1.47
CHUK-201ENST00000370397 DNMT1P26358 1616 aaKnown RBP24.21■■□□□ 1.47
CHUK-201ENST00000370397 NBPF8Q3BBV2 869 aa24.2■■□□□ 1.46
CHUK-201ENST00000370397 MPHOSPH9Q99550 1183 aa24.2■■□□□ 1.46
CHUK-201ENST00000370397 MBD5Q9P267 1494 aa24.19■■□□□ 1.46
CHUK-201ENST00000370397 PBRM1Q86U86 1689 aa24.18■■□□□ 1.46
CHUK-201ENST00000370397 CDK13Q14004 1512 aaKnown RBP24.18■■□□□ 1.46
CHUK-201ENST00000370397 TDRD9Q8NDG6 1382 aaKnown RBP24.17■■□□□ 1.46
CHUK-201ENST00000370397 RNF123Q5XPI4 1314 aa24.16■■□□□ 1.46
CHUK-201ENST00000370397 DHX29Q7Z478 1369 aaKnown RBP24.16■■□□□ 1.46
CHUK-201ENST00000370397 KIF7Q2M1P5 1343 aa24.15■■□□□ 1.46
CHUK-201ENST00000370397 ROCK1Q13464 1354 aa24.14■■□□□ 1.46
CHUK-201ENST00000370397 SMG6Q86US8 1419 aaKnown RBP24.13■■□□□ 1.45
CHUK-201ENST00000370397 B4GALNT3Q6L9W6 998 aa24.13■■□□□ 1.45
CHUK-201ENST00000370397 CHIC2Q9UKJ5 165 aa24.12■■□□□ 1.45
CHUK-201ENST00000370397 IQGAP2Q13576 1575 aa24.12■■□□□ 1.45
CHUK-201ENST00000370397 DAPK1P53355 1430 aa24.11■■□□□ 1.45
CHUK-201ENST00000370397 FOXD1Q16676 465 aa24.1■■□□□ 1.45
CHUK-201ENST00000370397 ABCC5O15440 1437 aa24.08■■□□□ 1.44
CHUK-201ENST00000370397 KDM5CP41229 1560 aa24.08■■□□□ 1.44
CHUK-201ENST00000370397 PZPP20742 1482 aa24.07■■□□□ 1.44
CHUK-201ENST00000370397 FAM9BQ8IZU0 186 aa24.07■■□□□ 1.44
CHUK-201ENST00000370397 MRS2Q9HD23 443 aa24.07■■□□□ 1.44
CHUK-201ENST00000370397 IFT140Q96RY7 1462 aa24.06■■□□□ 1.44
CHUK-201ENST00000370397 ADAMTS12P58397 1594 aa24.06■■□□□ 1.44
CHUK-201ENST00000370397 KIF14Q15058 1648 aa24.05■■□□□ 1.44
CHUK-201ENST00000370397 ADGBQ8N7X0 1667 aa24.02■■□□□ 1.44
CHUK-201ENST00000370397 CROCC2H7BZ55 1655 aa24.02■■□□□ 1.44
CHUK-201ENST00000370397 E9PCH4 1651 aa23.99■■□□□ 1.43
CHUK-201ENST00000370397 PAK3O75914 559 aaPredicted RBP23.99■■□□□ 1.43
CHUK-201ENST00000370397 MYT1LQ9UL68 1186 aa23.98■■□□□ 1.43
CHUK-201ENST00000370397 DEKP35659 375 aaKnown RBP23.93■■□□□ 1.42
CHUK-201ENST00000370397 NUP153P49790 1475 aaKnown RBP23.93■■□□□ 1.42
CHUK-201ENST00000370397 ERICH6Q7L0X2 663 aa23.92■■□□□ 1.42
CHUK-201ENST00000370397 KIAA0556O60303 1618 aa23.92■■□□□ 1.42
CHUK-201ENST00000370397 NOP58Q9Y2X3 529 aaKnown RBP23.92■■□□□ 1.42
CHUK-201ENST00000370397 NUDCQ9Y266 331 aa23.91■■□□□ 1.42
CHUK-201ENST00000370397 DISP1Q96F81 1524 aa23.91■■□□□ 1.42
CHUK-201ENST00000370397 ADGRL2O95490 1459 aa23.88■■□□□ 1.41
CHUK-201ENST00000370397 EIF4G3O43432 1585 aaKnown RBP23.88■■□□□ 1.41
CHUK-201ENST00000370397 ADCY10Q96PN6 1610 aa23.88■■□□□ 1.41
CHUK-201ENST00000370397 RAPGEF6Q8TEU7 1601 aa23.88■■□□□ 1.41
CHUK-201ENST00000370397 ZNF644Q9H582 1327 aaPredicted RBP23.88■■□□□ 1.41
CHUK-201ENST00000370397 ZNF608Q9ULD9 1512 aaPredicted RBP23.88■■□□□ 1.41
CHUK-201ENST00000370397 LRPPRCP42704 1394 aaKnown RBP23.87■■□□□ 1.41
CHUK-201ENST00000370397 UHRF1BP1Q6BDS2 1440 aa23.87■■□□□ 1.41
CHUK-201ENST00000370397 USP47Q96K76 1375 aa23.85■■□□□ 1.41
CHUK-201ENST00000370397 ITSN2Q9NZM3 1697 aa23.85■■□□□ 1.41
CHUK-201ENST00000370397 PNISRQ8TF01 805 aaKnown RBP23.84■■□□□ 1.41
CHUK-201ENST00000370397 RALGAPBQ86X10 1494 aa23.84■■□□□ 1.41
CHUK-201ENST00000370397 CAMSAP2Q08AD1 1489 aa23.83■■□□□ 1.41
CHUK-201ENST00000370397 KIAA1107Q9UPP5 1409 aa23.83■■□□□ 1.41
CHUK-201ENST00000370397 ARID4BQ4LE39 1312 aaPredicted RBP23.83■■□□□ 1.4
CHUK-201ENST00000370397 SLC4A1APQ9BWU0 796 aaKnown RBP23.79■■□□□ 1.4
CHUK-201ENST00000370397 IPO9Q96P70 1041 aaKnown RBP23.78■■□□□ 1.4
CHUK-201ENST00000370397 CDC42BPAQ5VT25 1732 aa23.78■■□□□ 1.4
CHUK-201ENST00000370397 ARHGEF12Q9NZN5 1544 aa23.78■■□□□ 1.4
CHUK-201ENST00000370397 KDM5DQ9BY66 1539 aa23.75■■□□□ 1.39
CHUK-201ENST00000370397 CEP170Q5SW79 1584 aa23.75■■□□□ 1.39
CHUK-201ENST00000370397 GPATCH8Q9UKJ3 1502 aaKnown RBP23.74■■□□□ 1.39
CHUK-201ENST00000370397 KIAA0586Q9BVV6 1533 aa23.73■■□□□ 1.39
CHUK-201ENST00000370397 CCDC136Q96JN2 1154 aa23.7■■□□□ 1.38
CHUK-201ENST00000370397 ROCK2O75116 1388 aaKnown RBP23.7■■□□□ 1.38
CHUK-201ENST00000370397 TROQ12816 1431 aaPredicted RBP23.69■■□□□ 1.38
CHUK-201ENST00000370397 PRG4Q92954 1404 aaPredicted RBP23.69■■□□□ 1.38
CHUK-201ENST00000370397 NBR1Q14596 966 aa23.69■■□□□ 1.38
CHUK-201ENST00000370397 ARID3CA6NKF2 412 aa23.68■■□□□ 1.38
CHUK-201ENST00000370397 MAGI1Q96QZ7 1491 aaPredicted RBP23.68■■□□□ 1.38
CHUK-201ENST00000370397 BRD4O60885 1362 aaPredicted RBP23.67■■□□□ 1.38
CHUK-201ENST00000370397 TRPM1Q7Z4N2 1603 aa23.65■■□□□ 1.38
CHUK-201ENST00000370397 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
CHUK-201ENST00000370397 KTN1Q86UP2 1357 aaKnown RBP23.64■■□□□ 1.38
CHUK-201ENST00000370397 PTPRGP23470 1445 aa23.63■■□□□ 1.37
CHUK-201ENST00000370397 SHANK2Q9UPX8 1470 aa23.63■■□□□ 1.37
CHUK-201ENST00000370397 RRP1P56182 461 aaKnown RBP23.6■■□□□ 1.37
CHUK-201ENST00000370397 ANP32AP39687 249 aaKnown RBP23.6■■□□□ 1.37
CHUK-201ENST00000370397 SENP3-EIF4A1A0A087X0R7 540 aa23.59■■□□□ 1.37
CHUK-201ENST00000370397 PKD2Q13563 968 aa23.59■■□□□ 1.37
CHUK-201ENST00000370397 ANKRD50Q9ULJ7 1429 aa23.59■■□□□ 1.37
CHUK-201ENST00000370397 PARD3Q8TEW0 1356 aa23.59■■□□□ 1.37
CHUK-201ENST00000370397 MYBBP1AQ9BQG0 1328 aaKnown RBP23.58■■□□□ 1.37
CHUK-201ENST00000370397 ZMYM4Q5VZL5 1548 aa23.56■■□□□ 1.36
CHUK-201ENST00000370397 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
CHUK-201ENST00000370397 ABCC10Q5T3U5 1492 aa23.56■■□□□ 1.36
CHUK-201ENST00000370397 SYNJ2O15056 1496 aa23.56■■□□□ 1.36
CHUK-201ENST00000370397 PLB1Q6P1J6 1458 aa23.56■■□□□ 1.36
CHUK-201ENST00000370397 EXOC6Q8TAG9 804 aa23.55■■□□□ 1.36
CHUK-201ENST00000370397 LAMC1P11047 1609 aa23.55■■□□□ 1.36
CHUK-201ENST00000370397 ZBTB47Q9UFB7 747 aaPredicted RBP23.54■■□□□ 1.36
CHUK-201ENST00000370397 TMC1Q8TDI8 760 aa23.53■■□□□ 1.36
CHUK-201ENST00000370397 ANKRD30AQ9BXX3 1397 aa23.52■■□□□ 1.36
CHUK-201ENST00000370397 RALBP1Q15311 655 aa23.51■■□□□ 1.35
CHUK-201ENST00000370397 BLMP54132 1417 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms