RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 SETQ01105 290 aaPredicted RBP8.7□□□□□ -1.02
NF1-201ENST00000356175 FAM43AQ8N2R8 423 aa8.69□□□□□ -1.02
NF1-201ENST00000356175 ZNF592Q92610 1267 aa8.69□□□□□ -1.02
NF1-201ENST00000356175 IBSPP21815 317 aaPredicted RBP8.68□□□□□ -1.02
NF1-201ENST00000356175 MYO10Q9HD67 2058 aa8.68□□□□□ -1.02
NF1-201ENST00000356175 CFAP44Q96MT7 982 aa8.68□□□□□ -1.02
NF1-201ENST00000356175 C11orf95C9JLR9 678 aaPredicted RBP8.68□□□□□ -1.02
NF1-201ENST00000356175 MYH16Q9H6N6 1097 aa8.68□□□□□ -1.02
NF1-201ENST00000356175 KLHL34Q8N239 644 aa8.67□□□□□ -1.02
NF1-201ENST00000356175 MPNDQ8N594 471 aa8.67□□□□□ -1.02
NF1-201ENST00000356175 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.67□□□□□ -1.02
NF1-201ENST00000356175 IRX3P78415 501 aaPredicted RBP8.67□□□□□ -1.02
NF1-201ENST00000356175 SKIDA1Q1XH10 827 aa8.67□□□□□ -1.02
NF1-201ENST00000356175 HSP90AB3PQ58FF7 597 aa8.67□□□□□ -1.02
NF1-201ENST00000356175 CCAR2Q8N163 923 aaKnown RBP8.66□□□□□ -1.02
NF1-201ENST00000356175 ZRSR1Q15695 479 aaKnown RBP8.66□□□□□ -1.02
NF1-201ENST00000356175 UQCRHLA0A096LP55 91 aa8.65□□□□□ -1.02
NF1-201ENST00000356175 UQCRHP07919 91 aa8.65□□□□□ -1.02
NF1-201ENST00000356175 SIN3AQ96ST3 1273 aa8.65□□□□□ -1.02
NF1-201ENST00000356175 PLCD4Q9BRC7 762 aa8.65□□□□□ -1.02
NF1-201ENST00000356175 GOLGA6L1Q8N7Z2 621 aa8.65□□□□□ -1.02
NF1-201ENST00000356175 FOXD4L6Q3SYB3 417 aaPredicted RBP8.64□□□□□ -1.03
NF1-201ENST00000356175 FOXD4L3Q6VB84 417 aaPredicted RBP8.64□□□□□ -1.03
NF1-201ENST00000356175 KIAA1211Q6ZU35 1233 aa8.64□□□□□ -1.03
NF1-201ENST00000356175 TPM2P07951 284 aa8.64□□□□□ -1.03
NF1-201ENST00000356175 IPO4Q8TEX9 1081 aaKnown RBP8.63□□□□□ -1.03
NF1-201ENST00000356175 NOC3LQ8WTT2 800 aaKnown RBP8.63□□□□□ -1.03
NF1-201ENST00000356175 NFKBIBQ15653 356 aa8.62□□□□□ -1.03
NF1-201ENST00000356175 GBP4Q96PP9 640 aa8.62□□□□□ -1.03
NF1-201ENST00000356175 CERS3Q8IU89 383 aa8.62□□□□□ -1.03
NF1-201ENST00000356175 CBX1P83916 185 aa8.62□□□□□ -1.03
NF1-201ENST00000356175 NOL8Q76FK4 1167 aaKnown RBP8.61□□□□□ -1.03
NF1-201ENST00000356175 MYH10P35580 1976 aa8.61□□□□□ -1.03
NF1-201ENST00000356175 ARID3CA6NKF2 412 aa8.61□□□□□ -1.03
NF1-201ENST00000356175 KCNJ4P48050 445 aa8.61□□□□□ -1.03
NF1-201ENST00000356175 FRAT2O75474 233 aaPredicted RBP8.61□□□□□ -1.03
NF1-201ENST00000356175 MFAP1P55081 439 aaKnown RBP8.61□□□□□ -1.03
NF1-201ENST00000356175 TTLL5Q6EMB2 1281 aa8.6□□□□□ -1.03
NF1-201ENST00000356175 FGD1P98174 961 aa8.6□□□□□ -1.03
NF1-201ENST00000356175 SETD1BQ9UPS6 1966 aaKnown RBP8.6□□□□□ -1.03
NF1-201ENST00000356175 FTSJ3Q8IY81 847 aaKnown RBP8.59□□□□□ -1.03
NF1-201ENST00000356175 SENP3Q9H4L4 574 aaPredicted RBP8.58□□□□□ -1.04
NF1-201ENST00000356175 NPHP1O15259 732 aa8.58□□□□□ -1.04
NF1-201ENST00000356175 SPDYE4A6NLX3 237 aa8.57□□□□□ -1.04
NF1-201ENST00000356175 PDE4AP27815 886 aa8.57□□□□□ -1.04
NF1-201ENST00000356175 GNL2Q13823 731 aaKnown RBP8.57□□□□□ -1.04
NF1-201ENST00000356175 TOMM22Q9NS69 142 aa8.56□□□□□ -1.04
NF1-201ENST00000356175 TEX35Q5T0J7 233 aa8.56□□□□□ -1.04
NF1-201ENST00000356175 SRPK2P78362 688 aaKnown RBP8.56□□□□□ -1.04
NF1-201ENST00000356175 NOM1Q5C9Z4 860 aaKnown RBP8.56□□□□□ -1.04
NF1-201ENST00000356175 OS9Q13438 667 aaPredicted RBP8.55□□□□□ -1.04
NF1-201ENST00000356175 CCDC66A2RUB6 948 aa8.55□□□□□ -1.04
NF1-201ENST00000356175 GOLGA6L4A6NEF3 574 aa8.55□□□□□ -1.04
NF1-201ENST00000356175 NASPP49321 788 aaPredicted RBP8.54□□□□□ -1.04
NF1-201ENST00000356175 FBXW7Q969H0 707 aa8.54□□□□□ -1.04
NF1-201ENST00000356175 FBXO3Q9UK99 471 aa8.54□□□□□ -1.04
NF1-201ENST00000356175 TCERG1O14776 1098 aaKnown RBP8.54□□□□□ -1.04
NF1-201ENST00000356175 IGSF3O75054 1194 aa8.54□□□□□ -1.04
NF1-201ENST00000356175 SRRTQ9BXP5 876 aaKnown RBP8.53□□□□□ -1.04
NF1-201ENST00000356175 NRDCO43847 1150 aa8.53□□□□□ -1.04
NF1-201ENST00000356175 CEP162Q5TB80 1403 aa8.53□□□□□ -1.04
NF1-201ENST00000356175 GORABQ5T7V8 394 aa8.53□□□□□ -1.04
NF1-201ENST00000356175 NEUROD2Q15784 382 aa8.53□□□□□ -1.04
NF1-201ENST00000356175 APBB1O00213 710 aa8.53□□□□□ -1.04
NF1-201ENST00000356175 NCBP3Q53F19 620 aaKnown RBP8.53□□□□□ -1.04
NF1-201ENST00000356175 CC2D1BQ5T0F9 858 aaKnown RBP8.53□□□□□ -1.04
NF1-201ENST00000356175 DDX11L8A8MPP1 907 aa8.52□□□□□ -1.05
NF1-201ENST00000356175 MAP7D2Q96T17 732 aa8.52□□□□□ -1.05
NF1-201ENST00000356175 RSPH4AQ5TD94 716 aa8.52□□□□□ -1.05
NF1-201ENST00000356175 CASC1Q6TDU7 716 aa8.52□□□□□ -1.05
NF1-201ENST00000356175 KDM2AQ9Y2K7 1162 aa8.52□□□□□ -1.05
NF1-201ENST00000356175 MYO18AQ92614 2054 aaKnown RBP8.51□□□□□ -1.05
NF1-201ENST00000356175 PLIN1O60240 522 aa8.51□□□□□ -1.05
NF1-201ENST00000356175 CALD1Q05682 793 aaKnown RBP8.51□□□□□ -1.05
NF1-201ENST00000356175 ZBTB9Q96C00 473 aa8.51□□□□□ -1.05
NF1-201ENST00000356175 CNPY4Q8N129 248 aa8.51□□□□□ -1.05
NF1-201ENST00000356175 U2SURPO15042 1029 aaKnown RBP8.5□□□□□ -1.05
NF1-201ENST00000356175 GTF2A1P52655 376 aaPredicted RBP8.5□□□□□ -1.05
NF1-201ENST00000356175 TICAM2Q86XR7 235 aa8.5□□□□□ -1.05
NF1-201ENST00000356175 POGKQ9P215 609 aa8.5□□□□□ -1.05
NF1-201ENST00000356175 RDXP35241 583 aaKnown RBP8.49□□□□□ -1.05
NF1-201ENST00000356175 CHMP3Q9Y3E7 222 aa8.49□□□□□ -1.05
NF1-201ENST00000356175 RNF214Q8ND24 703 aa8.49□□□□□ -1.05
NF1-201ENST00000356175 CSPP1Q1MSJ5 1256 aa8.49□□□□□ -1.05
NF1-201ENST00000356175 AAMPQ13685 434 aa8.49□□□□□ -1.05
NF1-201ENST00000356175 CWC15Q9P013 229 aaKnown RBP8.49□□□□□ -1.05
NF1-201ENST00000356175 TMX1Q9H3N1 280 aa8.48□□□□□ -1.05
NF1-201ENST00000356175 IFT57Q9NWB7 429 aa8.48□□□□□ -1.05
NF1-201ENST00000356175 DDX49Q9Y6V7 483 aaKnown RBP8.48□□□□□ -1.05
NF1-201ENST00000356175 H0YHG0 523 aa8.48□□□□□ -1.05
NF1-201ENST00000356175 CENPHQ9H3R5 247 aa8.48□□□□□ -1.05
NF1-201ENST00000356175 DEF6Q9H4E7 631 aa8.48□□□□□ -1.05
NF1-201ENST00000356175 TAF3Q5VWG9 929 aa8.48□□□□□ -1.05
NF1-201ENST00000356175 PPP4R3BQ5MIZ7 849 aa8.48□□□□□ -1.05
NF1-201ENST00000356175 GPS2Q13227 327 aa8.48□□□□□ -1.05
NF1-201ENST00000356175 FAM177BA6PVY3 158 aa8.47□□□□□ -1.05
NF1-201ENST00000356175 STK11IPQ8N1F8 1099 aa8.47□□□□□ -1.05
NF1-201ENST00000356175 XPCQ01831 940 aaPredicted RBP8.47□□□□□ -1.05
NF1-201ENST00000356175 RCAN3Q9UKA8 241 aa8.47□□□□□ -1.05
NF1-201ENST00000356175 EXOC6Q8TAG9 804 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms