RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 ZNF526Q8TF50 670 aaPredicted RBP9.89□□□□□ -0.83
LIN28B-201ENST00000345080 PLEKHG5O94827 1062 aa9.87□□□□□ -0.83
LIN28B-201ENST00000345080 DMRT2Q9Y5R5 561 aa9.86□□□□□ -0.83
LIN28B-201ENST00000345080 GOLGA6L3A6NEY3 463 aa9.86□□□□□ -0.83
LIN28B-201ENST00000345080 TAF3Q5VWG9 929 aa9.86□□□□□ -0.83
LIN28B-201ENST00000345080 CCDC88BA6NC98 1476 aa9.86□□□□□ -0.83
LIN28B-201ENST00000345080 LMOD2Q6P5Q4 547 aa9.85□□□□□ -0.83
LIN28B-201ENST00000345080 SETD5Q9C0A6 1442 aa9.85□□□□□ -0.83
LIN28B-201ENST00000345080 MTUS2Q5JR59 1369 aa9.85□□□□□ -0.83
LIN28B-201ENST00000345080 SENP3Q9H4L4 574 aaPredicted RBP9.84□□□□□ -0.83
LIN28B-201ENST00000345080 ZNF771Q7L3S4 317 aaPredicted RBP9.84□□□□□ -0.83
LIN28B-201ENST00000345080 FAM9BQ8IZU0 186 aa9.84□□□□□ -0.83
LIN28B-201ENST00000345080 EIF4G1Q04637 1599 aaKnown RBP9.84□□□□□ -0.83
LIN28B-201ENST00000345080 SOGA1O94964 1423 aa9.83□□□□□ -0.84
LIN28B-201ENST00000345080 POGZQ7Z3K3 1410 aa9.83□□□□□ -0.84
LIN28B-201ENST00000345080 MRS2Q9HD23 443 aa9.83□□□□□ -0.84
LIN28B-201ENST00000345080 TAF7LQ5H9L4 462 aa9.82□□□□□ -0.84
LIN28B-201ENST00000345080 FAM69CQ0P6D2 419 aa9.81□□□□□ -0.84
LIN28B-201ENST00000345080 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.8□□□□□ -0.84
LIN28B-201ENST00000345080 WIZO95785 1651 aa9.8□□□□□ -0.84
LIN28B-201ENST00000345080 KIF21BO75037 1637 aa9.79□□□□□ -0.84
LIN28B-201ENST00000345080 GZF1Q9H116 711 aaPredicted RBP9.79□□□□□ -0.84
LIN28B-201ENST00000345080 TMC1Q8TDI8 760 aa9.79□□□□□ -0.84
LIN28B-201ENST00000345080 MS4A1P11836 297 aa9.78□□□□□ -0.84
LIN28B-201ENST00000345080 SETQ01105 290 aaPredicted RBP9.78□□□□□ -0.84
LIN28B-201ENST00000345080 CSPP1Q1MSJ5 1256 aa9.78□□□□□ -0.84
LIN28B-201ENST00000345080 B4GALNT3Q6L9W6 998 aa9.77□□□□□ -0.84
LIN28B-201ENST00000345080 EFCAB2Q5VUJ9 269 aa9.77□□□□□ -0.85
LIN28B-201ENST00000345080 CADPSQ9ULU8 1353 aa9.77□□□□□ -0.85
LIN28B-201ENST00000345080 SMARCA4P51532 1647 aa9.77□□□□□ -0.85
LIN28B-201ENST00000345080 FAM13BQ9NYF5 915 aa9.77□□□□□ -0.85
LIN28B-201ENST00000345080 ARHGAP35Q9NRY4 1499 aa9.77□□□□□ -0.85
LIN28B-201ENST00000345080 ZRSR1Q15695 479 aaKnown RBP9.76□□□□□ -0.85
LIN28B-201ENST00000345080 GOLGA6L1Q8N7Z2 621 aa9.76□□□□□ -0.85
LIN28B-201ENST00000345080 WASHC2AQ641Q2 1341 aa9.76□□□□□ -0.85
LIN28B-201ENST00000345080 AEBP1Q8IUX7 1158 aa9.76□□□□□ -0.85
LIN28B-201ENST00000345080 POGKQ9P215 609 aa9.76□□□□□ -0.85
LIN28B-201ENST00000345080 CFDP1Q9UEE9 299 aaPredicted RBP9.76□□□□□ -0.85
LIN28B-201ENST00000345080 MYH16Q9H6N6 1097 aa9.75□□□□□ -0.85
LIN28B-201ENST00000345080 DHX57Q6P158 1386 aaKnown RBP9.75□□□□□ -0.85
LIN28B-201ENST00000345080 IL27Q8NEV9 243 aa9.75□□□□□ -0.85
LIN28B-201ENST00000345080 ZMYND15Q9H091 742 aa9.75□□□□□ -0.85
LIN28B-201ENST00000345080 PDIA4P13667 645 aaKnown RBP9.74□□□□□ -0.85
LIN28B-201ENST00000345080 STK11IPQ8N1F8 1099 aa9.74□□□□□ -0.85
LIN28B-201ENST00000345080 GBP4Q96PP9 640 aa9.74□□□□□ -0.85
LIN28B-201ENST00000345080 ISY1Q9ULR0 285 aaKnown RBP9.74□□□□□ -0.85
LIN28B-201ENST00000345080 DDX11L8A8MPP1 907 aa9.73□□□□□ -0.85
LIN28B-201ENST00000345080 NOC3LQ8WTT2 800 aaKnown RBP9.73□□□□□ -0.85
LIN28B-201ENST00000345080 C11orf95C9JLR9 678 aaPredicted RBP9.72□□□□□ -0.85
LIN28B-201ENST00000345080 CCDC66A2RUB6 948 aa9.72□□□□□ -0.85
LIN28B-201ENST00000345080 SPRYD3Q8NCJ5 442 aa9.71□□□□□ -0.85
LIN28B-201ENST00000345080 GOLGA6L6A8MZA4 724 aa9.71□□□□□ -0.85
LIN28B-201ENST00000345080 ERICH3Q5RHP9 1530 aa9.71□□□□□ -0.86
LIN28B-201ENST00000345080 MRC2Q9UBG0 1479 aa9.71□□□□□ -0.86
LIN28B-201ENST00000345080 KIAA2012Q0VF49 1180 aa9.71□□□□□ -0.86
LIN28B-201ENST00000345080 SKOR2Q2VWA4 1001 aaPredicted RBP9.71□□□□□ -0.86
LIN28B-201ENST00000345080 DRC7Q8IY82 874 aa9.71□□□□□ -0.86
LIN28B-201ENST00000345080 RAB3GAP2Q9H2M9 1393 aa9.7□□□□□ -0.86
LIN28B-201ENST00000345080 PDCL3Q9H2J4 239 aa9.7□□□□□ -0.86
LIN28B-201ENST00000345080 PAXIP1Q6ZW49 1069 aaPredicted RBP9.7□□□□□ -0.86
LIN28B-201ENST00000345080 TSPYL1Q9H0U9 437 aa9.7□□□□□ -0.86
LIN28B-201ENST00000345080 FMN1Q68DA7 1419 aa9.7□□□□□ -0.86
LIN28B-201ENST00000345080 GOLGA2Q08379 1002 aa9.69□□□□□ -0.86
LIN28B-201ENST00000345080 CFAP44Q96MT7 982 aa9.69□□□□□ -0.86
LIN28B-201ENST00000345080 CDCA8Q53HL2 280 aa9.69□□□□□ -0.86
LIN28B-201ENST00000345080 NRDCO43847 1150 aa9.69□□□□□ -0.86
LIN28B-201ENST00000345080 CSB-PGBD3P0DP91 1061 aa9.69□□□□□ -0.86
LIN28B-201ENST00000345080 HSCBQ8IWL3 235 aa9.68□□□□□ -0.86
LIN28B-201ENST00000345080 RBM25P49756 843 aaKnown RBP9.68□□□□□ -0.86
LIN28B-201ENST00000345080 TULP1O00294 542 aaPredicted RBP9.68□□□□□ -0.86
LIN28B-201ENST00000345080 WDR43Q15061 677 aaKnown RBP eCLIP9.67□□□□□ -0.86
LIN28B-201ENST00000345080 ROCK2O75116 1388 aaKnown RBP9.67□□□□□ -0.86
LIN28B-201ENST00000345080 CARMIL1Q5VZK9 1371 aa9.67□□□□□ -0.86
LIN28B-201ENST00000345080 SENP3-EIF4A1A0A087X0R7 540 aa9.67□□□□□ -0.86
LIN28B-201ENST00000345080 MRE11P49959 708 aa9.66□□□□□ -0.86
LIN28B-201ENST00000345080 ATF3P18847 181 aa9.65□□□□□ -0.86
LIN28B-201ENST00000345080 CUX2O14529 1486 aa9.65□□□□□ -0.86
LIN28B-201ENST00000345080 FANCD2Q9BXW9 1451 aa9.65□□□□□ -0.86
LIN28B-201ENST00000345080 NUDCQ9Y266 331 aa9.64□□□□□ -0.87
LIN28B-201ENST00000345080 MSH5O43196 834 aa9.64□□□□□ -0.87
LIN28B-201ENST00000345080 RGS3P49796 1198 aa9.64□□□□□ -0.87
LIN28B-201ENST00000345080 GGT6Q6P531 493 aa9.64□□□□□ -0.87
LIN28B-201ENST00000345080 BBXQ8WY36 941 aaPredicted RBP9.64□□□□□ -0.87
LIN28B-201ENST00000345080 RAPGEF2Q9Y4G8 1499 aa9.64□□□□□ -0.87
LIN28B-201ENST00000345080 RRBP1Q9P2E9 1410 aaKnown RBP9.64□□□□□ -0.87
LIN28B-201ENST00000345080 PTPRGP23470 1445 aa9.63□□□□□ -0.87
LIN28B-201ENST00000345080 IFT140Q96RY7 1462 aa9.63□□□□□ -0.87
LIN28B-201ENST00000345080 G3V3G9 751 aa9.63□□□□□ -0.87
LIN28B-201ENST00000345080 CALD1Q05682 793 aaKnown RBP9.63□□□□□ -0.87
LIN28B-201ENST00000345080 DCAF8Q5TAQ9 597 aa9.63□□□□□ -0.87
LIN28B-201ENST00000345080 BRPF3Q9ULD4 1205 aa9.63□□□□□ -0.87
LIN28B-201ENST00000345080 RSPH4AQ5TD94 716 aa9.63□□□□□ -0.87
LIN28B-201ENST00000345080 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.63□□□□□ -0.87
LIN28B-201ENST00000345080 PDE4AP27815 886 aa9.63□□□□□ -0.87
LIN28B-201ENST00000345080 NFKBIBQ15653 356 aa9.63□□□□□ -0.87
LIN28B-201ENST00000345080 EVA1CP58658 441 aa9.63□□□□□ -0.87
LIN28B-201ENST00000345080 FRAT1Q92837 279 aaPredicted RBP9.63□□□□□ -0.87
LIN28B-201ENST00000345080 PDE3BQ13370 1112 aa9.62□□□□□ -0.87
LIN28B-201ENST00000345080 PHLDB1Q86UU1 1377 aa9.62□□□□□ -0.87
LIN28B-201ENST00000345080 HSP90AB3PQ58FF7 597 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms