RNA–Protein interactions for RNA: ENST00000344680.8

RTN2-202, Transcript of reticulon 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN2, Length 2,063 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-202ENST00000344680 DNMT1P26358 1616 aaKnown RBP36.57■■■■□ 3.45
RTN2-202ENST00000344680 CFDP1Q9UEE9 299 aaPredicted RBP36.57■■■■□ 3.45
RTN2-202ENST00000344680 ABCC10Q5T3U5 1492 aa36.56■■■■□ 3.44
RTN2-202ENST00000344680 CHIC2Q9UKJ5 165 aa36.56■■■■□ 3.44
RTN2-202ENST00000344680 ZNF644Q9H582 1327 aaPredicted RBP36.56■■■■□ 3.44
RTN2-202ENST00000344680 GCC2Q8IWJ2 1684 aa36.56■■■■□ 3.44
RTN2-202ENST00000344680 ABCC5O15440 1437 aa36.55■■■■□ 3.44
RTN2-202ENST00000344680 ROCK1Q13464 1354 aa36.55■■■■□ 3.44
RTN2-202ENST00000344680 RRP7BPQ9NSQ0 103 aa36.53■■■■□ 3.44
RTN2-202ENST00000344680 CAMSAP2Q08AD1 1489 aa36.51■■■■□ 3.44
RTN2-202ENST00000344680 ABCC2Q92887 1545 aa36.51■■■■□ 3.43
RTN2-202ENST00000344680 TIMELESSQ9UNS1 1208 aa36.44■■■■□ 3.42
RTN2-202ENST00000344680 CDC42BPAQ5VT25 1732 aa36.42■■■■□ 3.42
RTN2-202ENST00000344680 UHRF1BP1LA0JNW5 1464 aa36.4■■■■□ 3.42
RTN2-202ENST00000344680 SIN3AQ96ST3 1273 aa36.39■■■■□ 3.42
RTN2-202ENST00000344680 ZNF777Q9ULD5 760 aaPredicted RBP36.35■■■■□ 3.41
RTN2-202ENST00000344680 KDM6BO15054 1643 aa36.35■■■■□ 3.41
RTN2-202ENST00000344680 RIMBP3CA6NJZ7 1639 aa36.3■■■■□ 3.4
RTN2-202ENST00000344680 RIMBP3BA6NNM3 1639 aa36.3■■■■□ 3.4
RTN2-202ENST00000344680 RIMBP3Q9UFD9 1639 aa36.3■■■■□ 3.4
RTN2-202ENST00000344680 ADGRL2O95490 1459 aa36.3■■■■□ 3.4
RTN2-202ENST00000344680 NCOA1Q15788 1441 aa36.27■■■■□ 3.4
RTN2-202ENST00000344680 CROCC2H7BZ55 1655 aa36.27■■■■□ 3.4
RTN2-202ENST00000344680 KDM5BQ9UGL1 1544 aa36.27■■■■□ 3.4
RTN2-202ENST00000344680 ADGBQ8N7X0 1667 aa36.24■■■■□ 3.39
RTN2-202ENST00000344680 TRIM52Q96A61 297 aa36.23■■■■□ 3.39
RTN2-202ENST00000344680 PREX2Q70Z35 1606 aa36.22■■■■□ 3.39
RTN2-202ENST00000344680 SHANK2Q9UPX8 1470 aa36.22■■■■□ 3.39
RTN2-202ENST00000344680 DENND4BO75064 1496 aaPredicted RBP36.2■■■■□ 3.39
RTN2-202ENST00000344680 ZCCHC11Q5TAX3 1644 aaKnown RBP36.2■■■■□ 3.39
RTN2-202ENST00000344680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.19■■■■□ 3.38
RTN2-202ENST00000344680 ANKRD30AQ9BXX3 1397 aa36.19■■■■□ 3.38
RTN2-202ENST00000344680 ARHGEF5Q12774 1597 aa36.17■■■■□ 3.38
RTN2-202ENST00000344680 CDC42BPBQ9Y5S2 1711 aa36.17■■■■□ 3.38
RTN2-202ENST00000344680 MPHOSPH9Q99550 1183 aa36.17■■■■□ 3.38
RTN2-202ENST00000344680 CYB5RLQ6IPT4 315 aa36.15■■■■□ 3.38
RTN2-202ENST00000344680 TTC37Q6PGP7 1564 aa36.15■■■■□ 3.38
RTN2-202ENST00000344680 MBD5Q9P267 1494 aa36.14■■■■□ 3.38
RTN2-202ENST00000344680 PPP1R15AO75807 674 aaPredicted RBP36.12■■■■□ 3.37
RTN2-202ENST00000344680 SAMD9LQ8IVG5 1584 aa36.12■■■■□ 3.37
RTN2-202ENST00000344680 RSPH4AQ5TD94 716 aa36.11■■■■□ 3.37
RTN2-202ENST00000344680 C9orf84Q5VXU9 1444 aa36.11■■■■□ 3.37
RTN2-202ENST00000344680 TONSLQ96HA7 1378 aa36.09■■■■□ 3.37
RTN2-202ENST00000344680 TSPY4P0CV99 314 aa36.09■■■■□ 3.37
RTN2-202ENST00000344680 TSPY10P0CW01 314 aa36.09■■■■□ 3.37
RTN2-202ENST00000344680 HNRNPMP52272 730 aaKnown RBP eCLIP36.07■■■■□ 3.37
RTN2-202ENST00000344680 ARHGAP5Q13017 1502 aa36.04■■■■□ 3.36
RTN2-202ENST00000344680 CCDC141Q6ZP82 1450 aa36.04■■■■□ 3.36
RTN2-202ENST00000344680 KCNH8Q96L42 1107 aa36.04■■■■□ 3.36
RTN2-202ENST00000344680 MYO5CQ9NQX4 1742 aa36.03■■■■□ 3.36
RTN2-202ENST00000344680 ANKRD50Q9ULJ7 1429 aa36.02■■■■□ 3.36
RTN2-202ENST00000344680 PLCH2O75038 1416 aa36■■■■□ 3.35
RTN2-202ENST00000344680 KIAA1107Q9UPP5 1409 aa36■■■■□ 3.35
RTN2-202ENST00000344680 PLEKHH2Q8IVE3 1493 aa36■■■■□ 3.35
RTN2-202ENST00000344680 NPM1P06748 294 aaKnown RBP eCLIP35.96■■■■□ 3.35
RTN2-202ENST00000344680 PZPP20742 1482 aa35.95■■■■□ 3.35
RTN2-202ENST00000344680 SLC4A1APQ9BWU0 796 aaKnown RBP35.95■■■■□ 3.35
RTN2-202ENST00000344680 ANKRD30BQ9BXX2 1392 aa35.95■■■■□ 3.35
RTN2-202ENST00000344680 SYCP2Q9BX26 1530 aa35.93■■■■□ 3.34
RTN2-202ENST00000344680 KIF15Q9NS87 1388 aa35.91■■■■□ 3.34
RTN2-202ENST00000344680 ASXL2Q76L83 1435 aa35.91■■■■□ 3.34
RTN2-202ENST00000344680 MAST1Q9Y2H9 1570 aa35.9■■■■□ 3.34
RTN2-202ENST00000344680 WDR7Q9Y4E6 1490 aa35.9■■■■□ 3.34
RTN2-202ENST00000344680 EFCAB2Q5VUJ9 269 aa35.89■■■■□ 3.34
RTN2-202ENST00000344680 FOXD1Q16676 465 aa35.87■■■■□ 3.33
RTN2-202ENST00000344680 ARAP3Q8WWN8 1544 aa35.86■■■■□ 3.33
RTN2-202ENST00000344680 RPRD2Q5VT52 1461 aaKnown RBP35.81■■■■□ 3.32
RTN2-202ENST00000344680 KDM5DQ9BY66 1539 aa35.81■■■■□ 3.32
RTN2-202ENST00000344680 ARHGEF12Q9NZN5 1544 aa35.81■■■■□ 3.32
RTN2-202ENST00000344680 MIER1Q8N108 512 aa35.78■■■■□ 3.32
RTN2-202ENST00000344680 ABCC1P33527 1531 aa35.76■■■■□ 3.32
RTN2-202ENST00000344680 NUP155O75694 1391 aa35.76■■■■□ 3.31
RTN2-202ENST00000344680 PLXNC1O60486 1568 aa35.74■■■■□ 3.31
RTN2-202ENST00000344680 ABCA9Q8IUA7 1624 aa35.72■■■■□ 3.31
RTN2-202ENST00000344680 PKD2Q13563 968 aa35.72■■■■□ 3.31
RTN2-202ENST00000344680 L3MBTL2Q969R5 705 aa35.69■■■■□ 3.3
RTN2-202ENST00000344680 TEX14Q8IWB6 1497 aa35.64■■■■□ 3.3
RTN2-202ENST00000344680 TRAPPC8Q9Y2L5 1435 aa35.64■■■■□ 3.3
RTN2-202ENST00000344680 YTHDC1Q96MU7 727 aaKnown RBP35.64■■■■□ 3.3
RTN2-202ENST00000344680 DNAJC5Q9H3Z4 198 aa35.64■■■■□ 3.3
RTN2-202ENST00000344680 DUOX2Q9NRD8 1548 aa35.62■■■■□ 3.29
RTN2-202ENST00000344680 FANCAO15360 1455 aa35.59■■■■□ 3.29
RTN2-202ENST00000344680 RTEL1-TNFRSF6BF6WH68 1400 aa35.58■■■■□ 3.29
RTN2-202ENST00000344680 UNC13BO14795 1591 aa35.58■■■■□ 3.29
RTN2-202ENST00000344680 ERBINQ96RT1 1412 aa35.57■■■■□ 3.28
RTN2-202ENST00000344680 FAM135AQ9P2D6 1515 aa35.55■■■■□ 3.28
RTN2-202ENST00000344680 SPAG9O60271 1321 aaKnown RBP35.52■■■■□ 3.28
RTN2-202ENST00000344680 AFAP1Q8N556 730 aa35.49■■■■□ 3.27
RTN2-202ENST00000344680 HIRIP3Q9BW71 556 aaPredicted RBP35.48■■■■□ 3.27
RTN2-202ENST00000344680 MAGI2Q86UL8 1455 aa35.46■■■■□ 3.27
RTN2-202ENST00000344680 ZFYVE16Q7Z3T8 1539 aa35.46■■■■□ 3.27
RTN2-202ENST00000344680 CD109Q6YHK3 1445 aa35.46■■■■□ 3.27
RTN2-202ENST00000344680 ADGRL1O94910 1474 aa35.44■■■■□ 3.26
RTN2-202ENST00000344680 NBPF8Q3BBV2 869 aa35.44■■■■□ 3.26
RTN2-202ENST00000344680 IQGAP3Q86VI3 1631 aa35.43■■■■□ 3.26
RTN2-202ENST00000344680 SCAPERQ9BY12 1400 aa35.43■■■■□ 3.26
RTN2-202ENST00000344680 DIP2BQ9P265 1576 aa35.41■■■■□ 3.26
RTN2-202ENST00000344680 DDX10Q13206 875 aaKnown RBP35.41■■■■□ 3.26
RTN2-202ENST00000344680 GLI2P10070 1586 aa35.4■■■■□ 3.26
RTN2-202ENST00000344680 FAM69CQ0P6D2 419 aa35.39■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms