RNA–Protein interactions for RNA: ENST00000335574.9

HM13-201, Transcript of histocompatibility minor 13, humanhuman

TSL 1 (best) BASIC

Gene HM13, Length 1,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-201ENST00000335574 CROCC2H7BZ55 1655 aa21.95■■□□□ 1.1
HM13-201ENST00000335574 ADGBQ8N7X0 1667 aa21.94■■□□□ 1.1
HM13-201ENST00000335574 ABCC10Q5T3U5 1492 aa21.93■■□□□ 1.1
HM13-201ENST00000335574 ZNF644Q9H582 1327 aaPredicted RBP21.92■■□□□ 1.1
HM13-201ENST00000335574 CLASP1Q7Z460 1538 aa21.92■■□□□ 1.1
HM13-201ENST00000335574 PLEKHD1A6NEE1 506 aa21.92■■□□□ 1.1
HM13-201ENST00000335574 NEUROD1Q13562 356 aa21.91■■□□□ 1.1
HM13-201ENST00000335574 CFDP1Q9UEE9 299 aaPredicted RBP21.89■■□□□ 1.09
HM13-201ENST00000335574 ERCC6L2Q5T890 1561 aa21.89■■□□□ 1.09
HM13-201ENST00000335574 ACIN1Q9UKV3 1341 aaKnown RBP21.88■■□□□ 1.09
HM13-201ENST00000335574 DENND4BO75064 1496 aaPredicted RBP21.86■■□□□ 1.09
HM13-201ENST00000335574 ADGRL2O95490 1459 aa21.83■■□□□ 1.09
HM13-201ENST00000335574 ABCC2Q92887 1545 aa21.83■■□□□ 1.08
HM13-201ENST00000335574 PPP1R15AO75807 674 aaPredicted RBP21.81■■□□□ 1.08
HM13-201ENST00000335574 CDC42BPBQ9Y5S2 1711 aa21.81■■□□□ 1.08
HM13-201ENST00000335574 PREX2Q70Z35 1606 aa21.8■■□□□ 1.08
HM13-201ENST00000335574 MIER1Q8N108 512 aa21.79■■□□□ 1.08
HM13-201ENST00000335574 TONSLQ96HA7 1378 aa21.79■■□□□ 1.08
HM13-201ENST00000335574 NCOA1Q15788 1441 aa21.78■■□□□ 1.08
HM13-201ENST00000335574 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
HM13-201ENST00000335574 SHANK2Q9UPX8 1470 aa21.77■■□□□ 1.08
HM13-201ENST00000335574 ARHGEF5Q12774 1597 aa21.76■■□□□ 1.07
HM13-201ENST00000335574 MPHOSPH9Q99550 1183 aa21.76■■□□□ 1.07
HM13-201ENST00000335574 ZNF777Q9ULD5 760 aaPredicted RBP21.76■■□□□ 1.07
HM13-201ENST00000335574 KDM5BQ9UGL1 1544 aa21.75■■□□□ 1.07
HM13-201ENST00000335574 UHRF1BP1LA0JNW5 1464 aa21.73■■□□□ 1.07
HM13-201ENST00000335574 SAMD9LQ8IVG5 1584 aa21.72■■□□□ 1.07
HM13-201ENST00000335574 ANKRD30AQ9BXX3 1397 aa21.71■■□□□ 1.07
HM13-201ENST00000335574 ZCCHC11Q5TAX3 1644 aaKnown RBP21.71■■□□□ 1.07
HM13-201ENST00000335574 TTC37Q6PGP7 1564 aa21.71■■□□□ 1.07
HM13-201ENST00000335574 MYO5CQ9NQX4 1742 aa21.7■■□□□ 1.06
HM13-201ENST00000335574 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.69■■□□□ 1.063e-6■■□□□ 13.1
HM13-201ENST00000335574 C9orf84Q5VXU9 1444 aa21.68■■□□□ 1.06
HM13-201ENST00000335574 PZPP20742 1482 aa21.67■■□□□ 1.06
HM13-201ENST00000335574 MBD5Q9P267 1494 aa21.67■■□□□ 1.06
HM13-201ENST00000335574 ANKRD30BQ9BXX2 1392 aa21.65■■□□□ 1.06
HM13-201ENST00000335574 CENPBP07199 599 aaPredicted RBP21.62■■□□□ 1.05
HM13-201ENST00000335574 ANKRD50Q9ULJ7 1429 aa21.62■■□□□ 1.05
HM13-201ENST00000335574 CCDC141Q6ZP82 1450 aa21.62■■□□□ 1.05
HM13-201ENST00000335574 RPRD2Q5VT52 1461 aaKnown RBP21.61■■□□□ 1.05
HM13-201ENST00000335574 ARHGAP5Q13017 1502 aa21.61■■□□□ 1.05
HM13-201ENST00000335574 MAST1Q9Y2H9 1570 aa21.6■■□□□ 1.05
HM13-201ENST00000335574 SLC4A1APQ9BWU0 796 aaKnown RBP21.59■■□□□ 1.05
HM13-201ENST00000335574 TSPY4P0CV99 314 aa21.59■■□□□ 1.05
HM13-201ENST00000335574 TSPY10P0CW01 314 aa21.59■■□□□ 1.05
HM13-201ENST00000335574 HNRNPMP52272 730 aaKnown RBP eCLIP21.59■■□□□ 1.05
HM13-201ENST00000335574 FOXD1Q16676 465 aa21.59■■□□□ 1.05
HM13-201ENST00000335574 RSPH4AQ5TD94 716 aa21.58■■□□□ 1.05
HM13-201ENST00000335574 SYCP2Q9BX26 1530 aa21.58■■□□□ 1.04
HM13-201ENST00000335574 KDM5DQ9BY66 1539 aa21.58■■□□□ 1.04
HM13-201ENST00000335574 PLEKHH2Q8IVE3 1493 aa21.56■■□□□ 1.04
HM13-201ENST00000335574 KIAA1107Q9UPP5 1409 aa21.54■■□□□ 1.04
HM13-201ENST00000335574 KIF15Q9NS87 1388 aa21.54■■□□□ 1.04
HM13-201ENST00000335574 TEX14Q8IWB6 1497 aa21.54■■□□□ 1.04
HM13-201ENST00000335574 PLCH2O75038 1416 aa21.52■■□□□ 1.03
HM13-201ENST00000335574 PLXNC1O60486 1568 aa21.51■■□□□ 1.03
HM13-201ENST00000335574 L3MBTL2Q969R5 705 aa21.5■■□□□ 1.03
HM13-201ENST00000335574 SCAF1Q9H7N4 1312 aaKnown RBP21.49■■□□□ 1.03
HM13-201ENST00000335574 KCNH8Q96L42 1107 aa21.48■■□□□ 1.03
HM13-201ENST00000335574 ARAP3Q8WWN8 1544 aa21.48■■□□□ 1.03
HM13-201ENST00000335574 YTHDC1Q96MU7 727 aaKnown RBP21.47■■□□□ 1.03
HM13-201ENST00000335574 HIRIP3Q9BW71 556 aaPredicted RBP21.46■■□□□ 1.03
HM13-201ENST00000335574 ABCC1P33527 1531 aa21.46■■□□□ 1.03
HM13-201ENST00000335574 NUP155O75694 1391 aa21.46■■□□□ 1.03
HM13-201ENST00000335574 ARHGEF12Q9NZN5 1544 aa21.45■■□□□ 1.02
HM13-201ENST00000335574 UNC13BO14795 1591 aa21.45■■□□□ 1.02
HM13-201ENST00000335574 DDX10Q13206 875 aaKnown RBP21.45■■□□□ 1.02
HM13-201ENST00000335574 PKD2Q13563 968 aa21.45■■□□□ 1.02
HM13-201ENST00000335574 WDR7Q9Y4E6 1490 aa21.43■■□□□ 1.02
HM13-201ENST00000335574 EFCAB2Q5VUJ9 269 aa21.41■■□□□ 1.02
HM13-201ENST00000335574 ABCA9Q8IUA7 1624 aa21.41■■□□□ 1.02
HM13-201ENST00000335574 FAM135AQ9P2D6 1515 aa21.4■■□□□ 1.02
HM13-201ENST00000335574 DUOX2Q9NRD8 1548 aa21.39■■□□□ 1.01
HM13-201ENST00000335574 OSCARQ8IYS5 282 aa21.38■■□□□ 1.01
HM13-201ENST00000335574 NBPF8Q3BBV2 869 aa21.37■■□□□ 1.01
HM13-201ENST00000335574 IQGAP3Q86VI3 1631 aa21.37■■□□□ 1.01
HM13-201ENST00000335574 HSPA5P11021 654 aaKnown RBP21.36■■□□□ 1.01
HM13-201ENST00000335574 POLR1AO95602 1720 aaPredicted RBP21.36■■□□□ 1.01
HM13-201ENST00000335574 EIF4G2P78344 907 aaKnown RBP eCLIP21.35■■□□□ 1.01
HM13-201ENST00000335574 ERBINQ96RT1 1412 aa21.33■■□□□ 1
HM13-201ENST00000335574 TRAPPC8Q9Y2L5 1435 aa21.33■■□□□ 1
HM13-201ENST00000335574 MAGI2Q86UL8 1455 aa21.32■■□□□ 1
HM13-201ENST00000335574 ASXL2Q76L83 1435 aa21.3■■□□□ 1
HM13-201ENST00000335574 RTEL1-TNFRSF6BF6WH68 1400 aa21.3■■□□□ 1
HM13-201ENST00000335574 ZFYVE16Q7Z3T8 1539 aa21.28■■□□□ 1
HM13-201ENST00000335574 SPATA31E1Q6ZUB1 1445 aa21.28■■□□□ 1
HM13-201ENST00000335574 UHRF1BP1Q6BDS2 1440 aa21.28■■□□□ 1
HM13-201ENST00000335574 FANCAO15360 1455 aa21.27■■□□□ 1
HM13-201ENST00000335574 WASHC2AQ641Q2 1341 aa21.26■□□□□ 0.99
HM13-201ENST00000335574 INO80Q9ULG1 1556 aaPredicted RBP21.26■□□□□ 0.99
HM13-201ENST00000335574 GTF3C3Q9Y5Q9 886 aa21.25■□□□□ 0.99
HM13-201ENST00000335574 ANP32CO43423 234 aa21.23■□□□□ 0.99
HM13-201ENST00000335574 CCER2I3L3R5 266 aa21.22■□□□□ 0.99
HM13-201ENST00000335574 SPAG9O60271 1321 aaKnown RBP21.22■□□□□ 0.99
HM13-201ENST00000335574 DEPDC5O75140 1603 aa21.21■□□□□ 0.99
HM13-201ENST00000335574 RALGAPBQ86X10 1494 aa21.21■□□□□ 0.99
HM13-201ENST00000335574 ATP7AQ04656 1500 aa21.21■□□□□ 0.99
HM13-201ENST00000335574 KDM5CP41229 1560 aa21.21■□□□□ 0.99
HM13-201ENST00000335574 PLA2R1Q13018 1463 aa21.2■□□□□ 0.98
HM13-201ENST00000335574 ATP10AO60312 1499 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms