RNA–Protein interactions for RNA: ENST00000333070.4

LCK-201, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 1 (best) BASIC

Gene LCK, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-201ENST00000333070 GPATCH8Q9UKJ3 1502 aaKnown RBP23.69■■□□□ 1.38
LCK-201ENST00000333070 ITSN2Q9NZM3 1697 aa23.69■■□□□ 1.38
LCK-201ENST00000333070 BCL11AQ9H165 835 aa23.67■■□□□ 1.38
LCK-201ENST00000333070 UACAQ9BZF9 1416 aa23.67■■□□□ 1.38
LCK-201ENST00000333070 GCC2Q8IWJ2 1684 aa23.67■■□□□ 1.38
LCK-201ENST00000333070 DNMT1P26358 1616 aaKnown RBP23.66■■□□□ 1.38
LCK-201ENST00000333070 DAPK1P53355 1430 aa23.65■■□□□ 1.38
LCK-201ENST00000333070 ZNF644Q9H582 1327 aaPredicted RBP23.65■■□□□ 1.38
LCK-201ENST00000333070 ABCC10Q5T3U5 1492 aa23.64■■□□□ 1.38
LCK-201ENST00000333070 ABCC5O15440 1437 aa23.64■■□□□ 1.37
LCK-201ENST00000333070 CHIC2Q9UKJ5 165 aa23.64■■□□□ 1.37
LCK-201ENST00000333070 RRP7BPQ9NSQ0 103 aa23.62■■□□□ 1.37
LCK-201ENST00000333070 CFDP1Q9UEE9 299 aaPredicted RBP23.62■■□□□ 1.37
LCK-201ENST00000333070 ROCK1Q13464 1354 aa23.61■■□□□ 1.37
LCK-201ENST00000333070 CAMSAP2Q08AD1 1489 aa23.6■■□□□ 1.37
LCK-201ENST00000333070 CDC42BPAQ5VT25 1732 aa23.59■■□□□ 1.37
LCK-201ENST00000333070 ABCC2Q92887 1545 aa23.58■■□□□ 1.37
LCK-201ENST00000333070 SIN3AQ96ST3 1273 aa23.55■■□□□ 1.36
LCK-201ENST00000333070 KDM6BO15054 1643 aa23.55■■□□□ 1.36
LCK-201ENST00000333070 TIMELESSQ9UNS1 1208 aa23.52■■□□□ 1.36
LCK-201ENST00000333070 UHRF1BP1LA0JNW5 1464 aa23.5■■□□□ 1.35
LCK-201ENST00000333070 CROCC2H7BZ55 1655 aa23.48■■□□□ 1.35
LCK-201ENST00000333070 ZNF777Q9ULD5 760 aaPredicted RBP23.48■■□□□ 1.35
LCK-201ENST00000333070 ADGRL2O95490 1459 aa23.46■■□□□ 1.35
LCK-201ENST00000333070 ADGBQ8N7X0 1667 aa23.46■■□□□ 1.35
LCK-201ENST00000333070 DENND4BO75064 1496 aaPredicted RBP23.45■■□□□ 1.34
LCK-201ENST00000333070 NCOA1Q15788 1441 aa23.45■■□□□ 1.34
LCK-201ENST00000333070 KDM5BQ9UGL1 1544 aa23.43■■□□□ 1.34
LCK-201ENST00000333070 PREX2Q70Z35 1606 aa23.43■■□□□ 1.34
LCK-201ENST00000333070 CDC42BPBQ9Y5S2 1711 aa23.42■■□□□ 1.34
LCK-201ENST00000333070 TRIM52Q96A61 297 aa23.41■■□□□ 1.34
LCK-201ENST00000333070 ZCCHC11Q5TAX3 1644 aaKnown RBP23.41■■□□□ 1.34
LCK-201ENST00000333070 SHANK2Q9UPX8 1470 aa23.4■■□□□ 1.34
LCK-201ENST00000333070 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.4■■□□□ 1.34
LCK-201ENST00000333070 TTC37Q6PGP7 1564 aa23.39■■□□□ 1.33
LCK-201ENST00000333070 MPHOSPH9Q99550 1183 aa23.38■■□□□ 1.33
LCK-201ENST00000333070 ARHGEF5Q12774 1597 aa23.38■■□□□ 1.33
LCK-201ENST00000333070 MBD5Q9P267 1494 aa23.37■■□□□ 1.33
LCK-201ENST00000333070 ANKRD30AQ9BXX3 1397 aa23.37■■□□□ 1.33
LCK-201ENST00000333070 SAMD9LQ8IVG5 1584 aa23.37■■□□□ 1.33
LCK-201ENST00000333070 PPP1R15AO75807 674 aaPredicted RBP23.36■■□□□ 1.33
LCK-201ENST00000333070 C9orf84Q5VXU9 1444 aa23.34■■□□□ 1.33
LCK-201ENST00000333070 TONSLQ96HA7 1378 aa23.32■■□□□ 1.32
LCK-201ENST00000333070 MYO5CQ9NQX4 1742 aa23.32■■□□□ 1.32
LCK-201ENST00000333070 HNRNPMP52272 730 aaKnown RBP eCLIP23.31■■□□□ 1.32
LCK-201ENST00000333070 OSCARQ8IYS5 282 aa23.31■■□□□ 1.32
LCK-201ENST00000333070 TSPY4P0CV99 314 aa23.29■■□□□ 1.32
LCK-201ENST00000333070 TSPY10P0CW01 314 aa23.29■■□□□ 1.32
LCK-201ENST00000333070 RSPH4AQ5TD94 716 aa23.29■■□□□ 1.32
LCK-201ENST00000333070 ARHGAP5Q13017 1502 aa23.29■■□□□ 1.32
LCK-201ENST00000333070 CCDC141Q6ZP82 1450 aa23.28■■□□□ 1.32
LCK-201ENST00000333070 KCNH8Q96L42 1107 aa23.27■■□□□ 1.32
LCK-201ENST00000333070 ANKRD50Q9ULJ7 1429 aa23.27■■□□□ 1.32
LCK-201ENST00000333070 PZPP20742 1482 aa23.26■■□□□ 1.31
LCK-201ENST00000333070 PLCH2O75038 1416 aa23.25■■□□□ 1.31
LCK-201ENST00000333070 KIAA1107Q9UPP5 1409 aa23.25■■□□□ 1.31
LCK-201ENST00000333070 ANKRD30BQ9BXX2 1392 aa23.24■■□□□ 1.31
LCK-201ENST00000333070 FKBP8Q14318 412 aa23.24■■□□□ 1.31
LCK-201ENST00000333070 RBM19Q9Y4C8 960 aaKnown RBP23.24■■□□□ 1.31
LCK-201ENST00000333070 SYCP2Q9BX26 1530 aa23.24■■□□□ 1.31
LCK-201ENST00000333070 PLEKHH2Q8IVE3 1493 aa23.23■■□□□ 1.31
LCK-201ENST00000333070 SLC4A1APQ9BWU0 796 aaKnown RBP23.23■■□□□ 1.31
LCK-201ENST00000333070 BCANQ96GW7 911 aa23.22■■□□□ 1.31
LCK-201ENST00000333070 FOXD1Q16676 465 aa23.21■■□□□ 1.31
LCK-201ENST00000333070 MAST1Q9Y2H9 1570 aa23.21■■□□□ 1.31
LCK-201ENST00000333070 KIF15Q9NS87 1388 aa23.2■■□□□ 1.3
LCK-201ENST00000333070 WDR7Q9Y4E6 1490 aa23.18■■□□□ 1.3
LCK-201ENST00000333070 EFCAB2Q5VUJ9 269 aa23.17■■□□□ 1.3
LCK-201ENST00000333070 ARAP3Q8WWN8 1544 aa23.16■■□□□ 1.3
LCK-201ENST00000333070 ARHGEF12Q9NZN5 1544 aa23.16■■□□□ 1.3
LCK-201ENST00000333070 RPRD2Q5VT52 1461 aaKnown RBP23.16■■□□□ 1.3
LCK-201ENST00000333070 KDM5DQ9BY66 1539 aa23.15■■□□□ 1.3
LCK-201ENST00000333070 NEFLP07196 543 aa23.14■■□□□ 1.29
LCK-201ENST00000333070 ABCC1P33527 1531 aa23.12■■□□□ 1.29
LCK-201ENST00000333070 NUP155O75694 1391 aa23.11■■□□□ 1.29
LCK-201ENST00000333070 PLXNC1O60486 1568 aa23.11■■□□□ 1.29
LCK-201ENST00000333070 ABCA9Q8IUA7 1624 aa23.09■■□□□ 1.29
LCK-201ENST00000333070 PKD2Q13563 968 aa23.08■■□□□ 1.29
LCK-201ENST00000333070 L3MBTL2Q969R5 705 aa23.08■■□□□ 1.29
LCK-201ENST00000333070 ASXL2Q76L83 1435 aa23.08■■□□□ 1.29
LCK-201ENST00000333070 TEX14Q8IWB6 1497 aa23.07■■□□□ 1.28
LCK-201ENST00000333070 TRAPPC8Q9Y2L5 1435 aa23.04■■□□□ 1.28
LCK-201ENST00000333070 UNC13BO14795 1591 aa23.02■■□□□ 1.27
LCK-201ENST00000333070 DUOX2Q9NRD8 1548 aa23.02■■□□□ 1.27
LCK-201ENST00000333070 NPM1P06748 294 aaKnown RBP eCLIP22.99■■□□□ 1.27
LCK-201ENST00000333070 FANCAO15360 1455 aa22.99■■□□□ 1.27
LCK-201ENST00000333070 FAM135AQ9P2D6 1515 aa22.99■■□□□ 1.27
LCK-201ENST00000333070 CCER2I3L3R5 266 aa22.99■■□□□ 1.27
LCK-201ENST00000333070 HIRIP3Q9BW71 556 aaPredicted RBP22.98■■□□□ 1.27
LCK-201ENST00000333070 MSH5O43196 834 aa22.97■■□□□ 1.27
LCK-201ENST00000333070 RTEL1-TNFRSF6BF6WH68 1400 aa22.97■■□□□ 1.27
LCK-201ENST00000333070 ERBINQ96RT1 1412 aa22.97■■□□□ 1.27
LCK-201ENST00000333070 FANCIQ9NVI1 1328 aa22.96■■□□□ 1.27
LCK-201ENST00000333070 DDX10Q13206 875 aaKnown RBP22.96■■□□□ 1.27
LCK-201ENST00000333070 NBPF8Q3BBV2 869 aa22.94■■□□□ 1.26
LCK-201ENST00000333070 SPAG9O60271 1321 aaKnown RBP22.94■■□□□ 1.26
LCK-201ENST00000333070 AFAP1Q8N556 730 aa22.93■■□□□ 1.26
LCK-201ENST00000333070 MAGI2Q86UL8 1455 aa22.93■■□□□ 1.26
LCK-201ENST00000333070 ZFYVE16Q7Z3T8 1539 aa22.93■■□□□ 1.26
LCK-201ENST00000333070 IQGAP3Q86VI3 1631 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms