RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 ZNF777Q9ULD5 760 aaPredicted RBP23.05■■□□□ 1.28
PGBD2-201ENST00000329291 AKNAQ7Z591 1439 aa23.04■■□□□ 1.28
PGBD2-201ENST00000329291 UHRF1BP1LA0JNW5 1464 aa23.02■■□□□ 1.28
PGBD2-201ENST00000329291 ABCC10Q5T3U5 1492 aa23.02■■□□□ 1.28
PGBD2-201ENST00000329291 OSCARQ8IYS5 282 aa23.02■■□□□ 1.28
PGBD2-201ENST00000329291 DNMT1P26358 1616 aaKnown RBP23.02■■□□□ 1.28
PGBD2-201ENST00000329291 CAMSAP2Q08AD1 1489 aa23.02■■□□□ 1.28
PGBD2-201ENST00000329291 GCC2Q8IWJ2 1684 aa23.01■■□□□ 1.27
PGBD2-201ENST00000329291 ROCK1Q13464 1354 aa22.99■■□□□ 1.27
PGBD2-201ENST00000329291 TRIM52Q96A61 297 aa22.98■■□□□ 1.27
PGBD2-201ENST00000329291 DENND4BO75064 1496 aaPredicted RBP22.98■■□□□ 1.27
PGBD2-201ENST00000329291 CDC42BPAQ5VT25 1732 aa22.97■■□□□ 1.27
PGBD2-201ENST00000329291 TIMELESSQ9UNS1 1208 aa22.96■■□□□ 1.27
PGBD2-201ENST00000329291 KDM5BQ9UGL1 1544 aa22.93■■□□□ 1.26
PGBD2-201ENST00000329291 PPP1R15AO75807 674 aaPredicted RBP22.93■■□□□ 1.26
PGBD2-201ENST00000329291 ZCCHC11Q5TAX3 1644 aaKnown RBP22.93■■□□□ 1.26
PGBD2-201ENST00000329291 MIER1Q8N108 512 aa22.91■■□□□ 1.26
PGBD2-201ENST00000329291 MPHOSPH9Q99550 1183 aa22.91■■□□□ 1.26
PGBD2-201ENST00000329291 NCOA1Q15788 1441 aa22.9■■□□□ 1.26
PGBD2-201ENST00000329291 FOXD1Q16676 465 aa22.88■■□□□ 1.25
PGBD2-201ENST00000329291 PREX2Q70Z35 1606 aa22.87■■□□□ 1.25
PGBD2-201ENST00000329291 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.85■■□□□ 1.25
PGBD2-201ENST00000329291 HNRNPMP52272 730 aaKnown RBP eCLIP22.85■■□□□ 1.25
PGBD2-201ENST00000329291 ACIN1Q9UKV3 1341 aaKnown RBP22.85■■□□□ 1.25
PGBD2-201ENST00000329291 CROCC2H7BZ55 1655 aa22.85■■□□□ 1.25
PGBD2-201ENST00000329291 TONSLQ96HA7 1378 aa22.84■■□□□ 1.25
PGBD2-201ENST00000329291 TTC37Q6PGP7 1564 aa22.84■■□□□ 1.25
PGBD2-201ENST00000329291 ADGBQ8N7X0 1667 aa22.83■■□□□ 1.24
PGBD2-201ENST00000329291 ADGRL2O95490 1459 aa22.83■■□□□ 1.24
PGBD2-201ENST00000329291 KCNH8Q96L42 1107 aa22.82■■□□□ 1.24
PGBD2-201ENST00000329291 CDC42BPBQ9Y5S2 1711 aa22.82■■□□□ 1.24
PGBD2-201ENST00000329291 MYO5CQ9NQX4 1742 aa22.79■■□□□ 1.24
PGBD2-201ENST00000329291 ARHGAP5Q13017 1502 aa22.79■■□□□ 1.24
PGBD2-201ENST00000329291 MBD5Q9P267 1494 aa22.79■■□□□ 1.24
PGBD2-201ENST00000329291 SHANK2Q9UPX8 1470 aa22.79■■□□□ 1.24
PGBD2-201ENST00000329291 ANKRD30AQ9BXX3 1397 aa22.79■■□□□ 1.24
PGBD2-201ENST00000329291 ARHGEF5Q12774 1597 aa22.78■■□□□ 1.24
PGBD2-201ENST00000329291 SAMD9LQ8IVG5 1584 aa22.78■■□□□ 1.24
PGBD2-201ENST00000329291 C9orf84Q5VXU9 1444 aa22.77■■□□□ 1.24
PGBD2-201ENST00000329291 TSPY4P0CV99 314 aa22.76■■□□□ 1.23
PGBD2-201ENST00000329291 TSPY10P0CW01 314 aa22.76■■□□□ 1.23
PGBD2-201ENST00000329291 SLC4A1APQ9BWU0 796 aaKnown RBP22.76■■□□□ 1.23
PGBD2-201ENST00000329291 RSPH4AQ5TD94 716 aa22.75■■□□□ 1.23
PGBD2-201ENST00000329291 ANKRD30BQ9BXX2 1392 aa22.74■■□□□ 1.23
PGBD2-201ENST00000329291 HIRIP3Q9BW71 556 aaPredicted RBP22.74■■□□□ 1.23
PGBD2-201ENST00000329291 PZPP20742 1482 aa22.74■■□□□ 1.23
PGBD2-201ENST00000329291 WDR7Q9Y4E6 1490 aa22.73■■□□□ 1.23
PGBD2-201ENST00000329291 CCDC141Q6ZP82 1450 aa22.73■■□□□ 1.23
PGBD2-201ENST00000329291 PLEKHH2Q8IVE3 1493 aa22.72■■□□□ 1.23
PGBD2-201ENST00000329291 PLCH2O75038 1416 aa22.72■■□□□ 1.23
PGBD2-201ENST00000329291 ANKRD50Q9ULJ7 1429 aa22.72■■□□□ 1.23
PGBD2-201ENST00000329291 NPM1P06748 294 aaKnown RBP eCLIP22.69■■□□□ 1.22
PGBD2-201ENST00000329291 SYCP2Q9BX26 1530 aa22.68■■□□□ 1.22
PGBD2-201ENST00000329291 KIAA1107Q9UPP5 1409 aa22.68■■□□□ 1.22
PGBD2-201ENST00000329291 EFCAB2Q5VUJ9 269 aa22.67■■□□□ 1.22
PGBD2-201ENST00000329291 L3MBTL2Q969R5 705 aa22.67■■□□□ 1.22
PGBD2-201ENST00000329291 KIF15Q9NS87 1388 aa22.66■■□□□ 1.22
PGBD2-201ENST00000329291 ASXL2Q76L83 1435 aa22.65■■□□□ 1.22
PGBD2-201ENST00000329291 ARAP3Q8WWN8 1544 aa22.64■■□□□ 1.22
PGBD2-201ENST00000329291 PKD2Q13563 968 aa22.63■■□□□ 1.21
PGBD2-201ENST00000329291 ARHGEF12Q9NZN5 1544 aa22.62■■□□□ 1.21
PGBD2-201ENST00000329291 RPRD2Q5VT52 1461 aaKnown RBP22.62■■□□□ 1.21
PGBD2-201ENST00000329291 YTHDC1Q96MU7 727 aaKnown RBP22.61■■□□□ 1.21
PGBD2-201ENST00000329291 MAST1Q9Y2H9 1570 aa22.61■■□□□ 1.21
PGBD2-201ENST00000329291 NUP155O75694 1391 aa22.61■■□□□ 1.21
PGBD2-201ENST00000329291 ABCA9Q8IUA7 1624 aa22.6■■□□□ 1.21
PGBD2-201ENST00000329291 DDX10Q13206 875 aaKnown RBP22.6■■□□□ 1.21
PGBD2-201ENST00000329291 ABCC1P33527 1531 aa22.58■■□□□ 1.21
PGBD2-201ENST00000329291 NBPF8Q3BBV2 869 aa22.55■■□□□ 1.2
PGBD2-201ENST00000329291 TEX14Q8IWB6 1497 aa22.54■■□□□ 1.2
PGBD2-201ENST00000329291 PLXNC1O60486 1568 aa22.52■■□□□ 1.2
PGBD2-201ENST00000329291 FANCAO15360 1455 aa22.52■■□□□ 1.2
PGBD2-201ENST00000329291 SCAF1Q9H7N4 1312 aaKnown RBP22.51■■□□□ 1.19
PGBD2-201ENST00000329291 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
PGBD2-201ENST00000329291 TRAPPC8Q9Y2L5 1435 aa22.5■■□□□ 1.19
PGBD2-201ENST00000329291 KDM5DQ9BY66 1539 aa22.5■■□□□ 1.19
PGBD2-201ENST00000329291 HSPA5P11021 654 aaKnown RBP22.49■■□□□ 1.19
PGBD2-201ENST00000329291 AFAP1Q8N556 730 aa22.46■■□□□ 1.19
PGBD2-201ENST00000329291 DUOX2Q9NRD8 1548 aa22.45■■□□□ 1.18
PGBD2-201ENST00000329291 RIMBP3CA6NJZ7 1639 aa22.45■■□□□ 1.18
PGBD2-201ENST00000329291 RIMBP3BA6NNM3 1639 aa22.45■■□□□ 1.18
PGBD2-201ENST00000329291 RIMBP3Q9UFD9 1639 aa22.45■■□□□ 1.18
PGBD2-201ENST00000329291 SPAG9O60271 1321 aaKnown RBP22.44■■□□□ 1.18
PGBD2-201ENST00000329291 CYB5RLQ6IPT4 315 aa22.43■■□□□ 1.18
PGBD2-201ENST00000329291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.43■■□□□ 1.18
PGBD2-201ENST00000329291 ADGRL1O94910 1474 aa22.43■■□□□ 1.18
PGBD2-201ENST00000329291 RTEL1-TNFRSF6BF6WH68 1400 aa22.43■■□□□ 1.18
PGBD2-201ENST00000329291 FAM135AQ9P2D6 1515 aa22.42■■□□□ 1.18
PGBD2-201ENST00000329291 CD109Q6YHK3 1445 aa22.41■■□□□ 1.18
PGBD2-201ENST00000329291 EIF4G2P78344 907 aaKnown RBP eCLIP22.41■■□□□ 1.18
PGBD2-201ENST00000329291 ERBINQ96RT1 1412 aa22.41■■□□□ 1.18
PGBD2-201ENST00000329291 SCAPERQ9BY12 1400 aa22.4■■□□□ 1.18
PGBD2-201ENST00000329291 UNC13BO14795 1591 aa22.39■■□□□ 1.18
PGBD2-201ENST00000329291 CFAP74Q9C0B2 1584 aa22.39■■□□□ 1.17
PGBD2-201ENST00000329291 ZFYVE16Q7Z3T8 1539 aa22.38■■□□□ 1.17
PGBD2-201ENST00000329291 WASHC2AQ641Q2 1341 aa22.37■■□□□ 1.17
PGBD2-201ENST00000329291 C11orf95C9JLR9 678 aaPredicted RBP22.36■■□□□ 1.17
PGBD2-201ENST00000329291 ATP7AQ04656 1500 aa22.34■■□□□ 1.17
PGBD2-201ENST00000329291 ZNF326Q5BKZ1 582 aaKnown RBP22.34■■□□□ 1.17
PGBD2-201ENST00000329291 INO80Q9ULG1 1556 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms