RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 MLECQ14165 292 aa17.86■□□□□ 0.45
PCM1-201ENST00000325083 CFDP1Q9UEE9 299 aaPredicted RBP17.85■□□□□ 0.45
PCM1-201ENST00000325083 GOLGA6L1Q8N7Z2 621 aa17.85■□□□□ 0.45
PCM1-201ENST00000325083 TPM4P67936 248 aa17.85■□□□□ 0.45
PCM1-201ENST00000325083 CHMP3Q9Y3E7 222 aa17.84■□□□□ 0.45
PCM1-201ENST00000325083 PAK3O75914 559 aaPredicted RBP17.84■□□□□ 0.45
PCM1-201ENST00000325083 SIN3AQ96ST3 1273 aa17.83■□□□□ 0.45
PCM1-201ENST00000325083 MORC1Q86VD1 984 aa17.82■□□□□ 0.44
PCM1-201ENST00000325083 FOXD4L1Q9NU39 408 aa17.81■□□□□ 0.44
PCM1-201ENST00000325083 GBP4Q96PP9 640 aa17.81■□□□□ 0.44
PCM1-201ENST00000325083 SLKQ9H2G2 1235 aaPredicted RBP17.81■□□□□ 0.44
PCM1-201ENST00000325083 NOL8Q76FK4 1167 aaKnown RBP17.81■□□□□ 0.44
PCM1-201ENST00000325083 RASSF8Q8NHQ8 419 aa17.81■□□□□ 0.44
PCM1-201ENST00000325083 TMX4Q9H1E5 349 aaPredicted RBP17.8■□□□□ 0.44
PCM1-201ENST00000325083 TMF1P82094 1093 aa17.8■□□□□ 0.44
PCM1-201ENST00000325083 VPS53Q5VIR6 699 aa17.8■□□□□ 0.44
PCM1-201ENST00000325083 STK26Q9P289 416 aa17.8■□□□□ 0.44
PCM1-201ENST00000325083 ITPRIPQ8IWB1 547 aa17.79■□□□□ 0.44
PCM1-201ENST00000325083 GORABQ5T7V8 394 aa17.78■□□□□ 0.44
PCM1-201ENST00000325083 G3V3G9 751 aa17.78■□□□□ 0.44
PCM1-201ENST00000325083 DCAF8Q5TAQ9 597 aa17.78■□□□□ 0.44
PCM1-201ENST00000325083 TRIM6-TRIM34B2RNG4 842 aa17.77■□□□□ 0.44
PCM1-201ENST00000325083 DCAF11Q8TEB1 546 aa17.77■□□□□ 0.44
PCM1-201ENST00000325083 CSB-PGBD3P0DP91 1061 aa17.77■□□□□ 0.43
PCM1-201ENST00000325083 WWC1Q8IX03 1113 aa17.76■□□□□ 0.43
PCM1-201ENST00000325083 PATL2C9JE40 543 aaKnown RBP17.76■□□□□ 0.43
PCM1-201ENST00000325083 TAF7LQ5H9L4 462 aa17.76■□□□□ 0.43
PCM1-201ENST00000325083 HTATSF1O43719 755 aaKnown RBP17.75■□□□□ 0.43
PCM1-201ENST00000325083 TRHP20396 242 aaPredicted RBP17.75■□□□□ 0.43
PCM1-201ENST00000325083 CFAP44Q96MT7 982 aa17.75■□□□□ 0.43
PCM1-201ENST00000325083 MFAP1P55081 439 aaKnown RBP17.75■□□□□ 0.43
PCM1-201ENST00000325083 CCDC9Q9Y3X0 531 aaKnown RBP17.75■□□□□ 0.43
PCM1-201ENST00000325083 PTMSP20962 102 aa17.75■□□□□ 0.43
PCM1-201ENST00000325083 FOXD4L5Q5VV16 416 aaPredicted RBP17.75■□□□□ 0.43
PCM1-201ENST00000325083 FOXD4L4Q8WXT5 416 aaPredicted RBP17.75■□□□□ 0.43
PCM1-201ENST00000325083 SYAP1Q96A49 352 aaPredicted RBP17.74■□□□□ 0.43
PCM1-201ENST00000325083 CEP89Q96ST8 783 aa17.73■□□□□ 0.43
PCM1-201ENST00000325083 PES1O00541 588 aaKnown RBP17.72■□□□□ 0.43
PCM1-201ENST00000325083 GPATCH3Q96I76 525 aa17.7■□□□□ 0.42
PCM1-201ENST00000325083 MARCH6O60337 910 aa17.69■□□□□ 0.42
PCM1-201ENST00000325083 IPO8O15397 1037 aaKnown RBP17.68■□□□□ 0.42
PCM1-201ENST00000325083 KANK1Q14678 1352 aa17.68■□□□□ 0.42
PCM1-201ENST00000325083 GOLGA6L3A6NEY3 463 aa17.68■□□□□ 0.42
PCM1-201ENST00000325083 RBM19Q9Y4C8 960 aaKnown RBP17.68■□□□□ 0.42
PCM1-201ENST00000325083 TOMM22Q9NS69 142 aa17.67■□□□□ 0.42
PCM1-201ENST00000325083 SETQ01105 290 aaPredicted RBP17.66■□□□□ 0.42
PCM1-201ENST00000325083 TPM3P06753 285 aa17.66■□□□□ 0.42
PCM1-201ENST00000325083 HDGFL2Q7Z4V5 671 aaPredicted RBP17.66■□□□□ 0.42
PCM1-201ENST00000325083 GOLGA3Q08378 1498 aa17.65■□□□□ 0.42
PCM1-201ENST00000325083 SLC4A10Q6U841 1118 aa17.65■□□□□ 0.42
PCM1-201ENST00000325083 TPD52L1Q16890 204 aaPredicted RBP17.65■□□□□ 0.42
PCM1-201ENST00000325083 CEP162Q5TB80 1403 aa17.64■□□□□ 0.41
PCM1-201ENST00000325083 CCAR2Q8N163 923 aaKnown RBP17.64■□□□□ 0.41
PCM1-201ENST00000325083 HDGFP51858 240 aaKnown RBP17.63■□□□□ 0.41
PCM1-201ENST00000325083 CSPP1Q1MSJ5 1256 aa17.63■□□□□ 0.41
PCM1-201ENST00000325083 RWDD1Q9H446 243 aaPredicted RBP17.63■□□□□ 0.41
PCM1-201ENST00000325083 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
PCM1-201ENST00000325083 KRI1Q8N9T8 703 aaKnown RBP17.63■□□□□ 0.41
PCM1-201ENST00000325083 FRAT2O75474 233 aaPredicted RBP17.62■□□□□ 0.41
PCM1-201ENST00000325083 CALD1Q05682 793 aaKnown RBP17.62■□□□□ 0.41
PCM1-201ENST00000325083 U2AF1L5P0DN76 240 aaPredicted RBP17.62■□□□□ 0.41
PCM1-201ENST00000325083 U2AF1Q01081 240 aaKnown RBP eCLIP17.62■□□□□ 0.413e-6■■■■□ 23.1
PCM1-201ENST00000325083 CCDC34Q96HJ3 373 aa17.62■□□□□ 0.41
PCM1-201ENST00000325083 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
PCM1-201ENST00000325083 SF3A1Q15459 793 aaKnown RBP17.6■□□□□ 0.41
PCM1-201ENST00000325083 FOXD4L6Q3SYB3 417 aaPredicted RBP17.59■□□□□ 0.41
PCM1-201ENST00000325083 FOXD4L3Q6VB84 417 aaPredicted RBP17.59■□□□□ 0.41
PCM1-201ENST00000325083 KTN1Q86UP2 1357 aaKnown RBP17.59■□□□□ 0.41
PCM1-201ENST00000325083 RCAN3Q9UKA8 241 aa17.58■□□□□ 0.41
PCM1-201ENST00000325083 STK31Q9BXU1 1019 aa17.57■□□□□ 0.4
PCM1-201ENST00000325083 SMC4Q9NTJ3 1288 aa17.57■□□□□ 0.4
PCM1-201ENST00000325083 CCDC146Q8IYE0 955 aa17.57■□□□□ 0.4
PCM1-201ENST00000325083 PMFBP1Q8TBY8 1022 aa17.57■□□□□ 0.4
PCM1-201ENST00000325083 SPAG9O60271 1321 aaKnown RBP17.57■□□□□ 0.4
PCM1-201ENST00000325083 USP35Q9P2H5 1018 aa17.57■□□□□ 0.4
PCM1-201ENST00000325083 RAD21O60216 631 aa17.56■□□□□ 0.4
PCM1-201ENST00000325083 KIF16BQ96L93 1317 aa17.56■□□□□ 0.4
PCM1-201ENST00000325083 H3BQV1 296 aa17.56■□□□□ 0.4
PCM1-201ENST00000325083 IFFO2Q5TF58 517 aa17.56■□□□□ 0.4
PCM1-201ENST00000325083 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.55■□□□□ 0.4
PCM1-201ENST00000325083 PHF14O94880 888 aa17.55■□□□□ 0.4
PCM1-201ENST00000325083 GGT6Q6P531 493 aa17.55■□□□□ 0.4
PCM1-201ENST00000325083 HSPA5P11021 654 aaKnown RBP17.54■□□□□ 0.4
PCM1-201ENST00000325083 FOXD1Q16676 465 aa17.54■□□□□ 0.4
PCM1-201ENST00000325083 CCNB3Q8WWL7 1395 aa17.54■□□□□ 0.4
PCM1-201ENST00000325083 TSR1Q2NL82 804 aaKnown RBP17.54■□□□□ 0.4
PCM1-201ENST00000325083 LTV1Q96GA3 475 aaPredicted RBP17.53■□□□□ 0.4
PCM1-201ENST00000325083 ZNF592Q92610 1267 aa17.52■□□□□ 0.39
PCM1-201ENST00000325083 CLUAP1Q96AJ1 413 aa17.52■□□□□ 0.39
PCM1-201ENST00000325083 ROCK2O75116 1388 aaKnown RBP17.52■□□□□ 0.39
PCM1-201ENST00000325083 TPM2P07951 284 aa17.51■□□□□ 0.39
PCM1-201ENST00000325083 PCMTD1Q96MG8 357 aaPredicted RBP17.51■□□□□ 0.39
PCM1-201ENST00000325083 ERCC6Q03468 1493 aa17.51■□□□□ 0.39
PCM1-201ENST00000325083 RILPL2Q969X0 211 aa17.51■□□□□ 0.39
PCM1-201ENST00000325083 TCEAL9Q9UHQ7 104 aa17.51■□□□□ 0.39
PCM1-201ENST00000325083 GTF2E1P29083 439 aaPredicted RBP17.51■□□□□ 0.39
PCM1-201ENST00000325083 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
PCM1-201ENST00000325083 MYO15BQ96JP2 1530 aa17.5■□□□□ 0.39
PCM1-201ENST00000325083 FAM184AQ8NB25 1140 aa17.49■□□□□ 0.39
PCM1-201ENST00000325083 ZNF771Q7L3S4 317 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms