RNA–Protein interactions for RNA: ENST00000324545.8

USP9X-201, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 5 BASIC

Gene USP9X, Length 12,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-201ENST00000324545 TRHP20396 242 aaPredicted RBP9.59□□□□□ -0.87
USP9X-201ENST00000324545 RASSF8Q8NHQ8 419 aa9.59□□□□□ -0.87
USP9X-201ENST00000324545 CFAP65Q6ZU64 1925 aaKnown RBP9.58□□□□□ -0.88
USP9X-201ENST00000324545 KDM4AO75164 1064 aa9.58□□□□□ -0.88
USP9X-201ENST00000324545 NOP58Q9Y2X3 529 aaKnown RBP9.58□□□□□ -0.88
USP9X-201ENST00000324545 HSCBQ8IWL3 235 aa9.58□□□□□ -0.88
USP9X-201ENST00000324545 STK26Q9P289 416 aa9.57□□□□□ -0.88
USP9X-201ENST00000324545 POGKQ9P215 609 aa9.56□□□□□ -0.88
USP9X-201ENST00000324545 NRDCO43847 1150 aa9.55□□□□□ -0.88
USP9X-201ENST00000324545 MAPK8IP3Q9UPT6 1336 aa9.55□□□□□ -0.88
USP9X-201ENST00000324545 G3V3G9 751 aa9.55□□□□□ -0.88
USP9X-201ENST00000324545 DCAF8Q5TAQ9 597 aa9.55□□□□□ -0.88
USP9X-201ENST00000324545 TOMM22Q9NS69 142 aa9.54□□□□□ -0.88
USP9X-201ENST00000324545 VSIG10Q8N0Z9 540 aa9.53□□□□□ -0.88
USP9X-201ENST00000324545 MYO10Q9HD67 2058 aa9.53□□□□□ -0.88
USP9X-201ENST00000324545 MSH5O43196 834 aa9.53□□□□□ -0.88
USP9X-201ENST00000324545 LTV1Q96GA3 475 aaPredicted RBP9.53□□□□□ -0.88
USP9X-201ENST00000324545 ANP32EQ9BTT0 268 aa9.53□□□□□ -0.88
USP9X-201ENST00000324545 TIMELESSQ9UNS1 1208 aa9.53□□□□□ -0.88
USP9X-201ENST00000324545 SKIDA1Q1XH10 827 aa9.52□□□□□ -0.88
USP9X-201ENST00000324545 ZNF428Q96B54 188 aa9.52□□□□□ -0.88
USP9X-201ENST00000324545 MAPK8IP2Q13387 824 aaPredicted RBP9.52□□□□□ -0.89
USP9X-201ENST00000324545 CSB-PGBD3P0DP91 1061 aa9.51□□□□□ -0.89
USP9X-201ENST00000324545 NUTM2DQ5VT03 806 aaPredicted RBP9.51□□□□□ -0.89
USP9X-201ENST00000324545 TRIM6-TRIM34B2RNG4 842 aa9.51□□□□□ -0.89
USP9X-201ENST00000324545 KNSTRNQ9Y448 316 aa9.5□□□□□ -0.89
USP9X-201ENST00000324545 MARCH6O60337 910 aa9.5□□□□□ -0.89
USP9X-201ENST00000324545 IBSPP21815 317 aaPredicted RBP9.5□□□□□ -0.89
USP9X-201ENST00000324545 ZNF592Q92610 1267 aa9.5□□□□□ -0.89
USP9X-201ENST00000324545 KIAA1211Q6ZU35 1233 aa9.49□□□□□ -0.89
USP9X-201ENST00000324545 NGEFQ8N5V2 710 aa9.49□□□□□ -0.89
USP9X-201ENST00000324545 GOLGA6L1Q8N7Z2 621 aa9.49□□□□□ -0.89
USP9X-201ENST00000324545 CFAP53Q96M91 514 aa9.49□□□□□ -0.89
USP9X-201ENST00000324545 NUTM2FA1L443 756 aa9.48□□□□□ -0.89
USP9X-201ENST00000324545 MEX3CQ5U5Q3 659 aaKnown RBP9.48□□□□□ -0.89
USP9X-201ENST00000324545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.48□□□□□ -0.894e-8■■■■■ 155.5
USP9X-201ENST00000324545 AK7Q96M32 723 aa9.48□□□□□ -0.89
USP9X-201ENST00000324545 CALRP27797 417 aaKnown RBP9.47□□□□□ -0.89
USP9X-201ENST00000324545 GORABQ5T7V8 394 aa9.47□□□□□ -0.89
USP9X-201ENST00000324545 MFAP1P55081 439 aaKnown RBP9.47□□□□□ -0.89
USP9X-201ENST00000324545 MTMR7Q9Y216 660 aa9.47□□□□□ -0.89
USP9X-201ENST00000324545 PLCD4Q9BRC7 762 aa9.47□□□□□ -0.89
USP9X-201ENST00000324545 FRAT2O75474 233 aaPredicted RBP9.46□□□□□ -0.9
USP9X-201ENST00000324545 GOLGA4Q13439 2230 aaKnown RBP9.46□□□□□ -0.9
USP9X-201ENST00000324545 ITPRIPQ8IWB1 547 aa9.46□□□□□ -0.9
USP9X-201ENST00000324545 APPP05067 770 aa9.45□□□□□ -0.9
USP9X-201ENST00000324545 SETD1BQ9UPS6 1966 aaKnown RBP9.45□□□□□ -0.9
USP9X-201ENST00000324545 SRPK2P78362 688 aaKnown RBP9.45□□□□□ -0.9
USP9X-201ENST00000324545 SLC4A10Q6U841 1118 aa9.44□□□□□ -0.9
USP9X-201ENST00000324545 MCCP23508 829 aa9.44□□□□□ -0.9
USP9X-201ENST00000324545 PHF23Q9BUL5 403 aaPredicted RBP9.44□□□□□ -0.9
USP9X-201ENST00000324545 CCDC146Q8IYE0 955 aa9.43□□□□□ -0.9
USP9X-201ENST00000324545 WDR70Q9NW82 654 aa9.43□□□□□ -0.9
USP9X-201ENST00000324545 PCMTD1Q96MG8 357 aaPredicted RBP9.43□□□□□ -0.9
USP9X-201ENST00000324545 CEP89Q96ST8 783 aa9.43□□□□□ -0.9
USP9X-201ENST00000324545 TTLL5Q6EMB2 1281 aa9.43□□□□□ -0.9
USP9X-201ENST00000324545 MCTP1Q6DN14 999 aa9.43□□□□□ -0.9
USP9X-201ENST00000324545 TPD52L1Q16890 204 aaPredicted RBP9.43□□□□□ -0.9
USP9X-201ENST00000324545 TCEAL9Q9UHQ7 104 aa9.43□□□□□ -0.9
USP9X-201ENST00000324545 TMX4Q9H1E5 349 aaPredicted RBP9.42□□□□□ -0.9
USP9X-201ENST00000324545 FYB1O15117 783 aa9.42□□□□□ -0.9
USP9X-201ENST00000324545 TSPY4P0CV99 314 aa9.42□□□□□ -0.9
USP9X-201ENST00000324545 TSPY10P0CW01 314 aa9.42□□□□□ -0.9
USP9X-201ENST00000324545 NECTIN2Q92692 538 aa9.42□□□□□ -0.9
USP9X-201ENST00000324545 SLC4A3P48751 1232 aa9.42□□□□□ -0.9
USP9X-201ENST00000324545 FOXD1Q16676 465 aa9.41□□□□□ -0.9
USP9X-201ENST00000324545 SCRIBQ14160 1630 aa9.41□□□□□ -0.9
USP9X-201ENST00000324545 CWC22Q9HCG8 908 aaKnown RBP9.41□□□□□ -0.9
USP9X-201ENST00000324545 RTF1Q92541 710 aaKnown RBP9.4□□□□□ -0.9
USP9X-201ENST00000324545 EIF4G2P78344 907 aaKnown RBP eCLIP9.39□□□□□ -0.91
USP9X-201ENST00000324545 CHMP4CQ96CF2 233 aa9.39□□□□□ -0.91
USP9X-201ENST00000324545 ZNF771Q7L3S4 317 aaPredicted RBP9.39□□□□□ -0.91
USP9X-201ENST00000324545 NAP1L1P55209 391 aaKnown RBP9.39□□□□□ -0.91
USP9X-201ENST00000324545 STK11IPQ8N1F8 1099 aa9.39□□□□□ -0.91
USP9X-201ENST00000324545 CARD11Q9BXL7 1154 aa9.39□□□□□ -0.91
USP9X-201ENST00000324545 GTF2E1P29083 439 aaPredicted RBP9.39□□□□□ -0.91
USP9X-201ENST00000324545 CHMP7Q8WUX9 453 aaPredicted RBP9.39□□□□□ -0.91
USP9X-201ENST00000324545 RRP12Q5JTH9 1297 aaKnown RBP9.38□□□□□ -0.91
USP9X-201ENST00000324545 SIN3AQ96ST3 1273 aa9.38□□□□□ -0.91
USP9X-201ENST00000324545 SETQ01105 290 aaPredicted RBP9.37□□□□□ -0.91
USP9X-201ENST00000324545 TPM3P06753 285 aa9.37□□□□□ -0.91
USP9X-201ENST00000324545 PPP1R1BQ9UD71 204 aaPredicted RBP9.37□□□□□ -0.91
USP9X-201ENST00000324545 DHX16O60231 1041 aaKnown RBP9.36□□□□□ -0.91
USP9X-201ENST00000324545 PAF1Q8N7H5 531 aa9.36□□□□□ -0.91
USP9X-201ENST00000324545 RRP7AQ9Y3A4 280 aaKnown RBP9.36□□□□□ -0.91
USP9X-201ENST00000324545 SF3A1Q15459 793 aaKnown RBP9.36□□□□□ -0.91
USP9X-201ENST00000324545 CLUAP1Q96AJ1 413 aa9.35□□□□□ -0.91
USP9X-201ENST00000324545 PPM1FP49593 454 aaPredicted RBP9.35□□□□□ -0.91
USP9X-201ENST00000324545 SYTL4Q96C24 671 aaPredicted RBP9.35□□□□□ -0.91
USP9X-201ENST00000324545 MTUS2Q5JR59 1369 aa9.35□□□□□ -0.91
USP9X-201ENST00000324545 MORC1Q86VD1 984 aa9.35□□□□□ -0.91
USP9X-201ENST00000324545 TPM4P67936 248 aa9.35□□□□□ -0.91
USP9X-201ENST00000324545 CTDP1Q9Y5B0 961 aaPredicted RBP9.35□□□□□ -0.91
USP9X-201ENST00000324545 BAZ1BQ9UIG0 1483 aaKnown RBP9.35□□□□□ -0.91
USP9X-201ENST00000324545 ZFYVE27Q5T4F4 411 aa9.35□□□□□ -0.91
USP9X-201ENST00000324545 CSRNP3Q8WYN3 585 aa9.34□□□□□ -0.91
USP9X-201ENST00000324545 TRIM34Q9BYJ4 488 aa9.34□□□□□ -0.91
USP9X-201ENST00000324545 RILPL2Q969X0 211 aa9.34□□□□□ -0.91
USP9X-201ENST00000324545 TTC16Q8NEE8 873 aa9.34□□□□□ -0.91
USP9X-201ENST00000324545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.34□□□□□ -0.917e-15■■■□□ 18.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms