RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 GCC2Q8IWJ2 1684 aa29.13■■■□□ 2.25
PDZD3-201ENST00000322712 ABCC2Q92887 1545 aa29.11■■■□□ 2.25
PDZD3-201ENST00000322712 DNMT1P26358 1616 aaKnown RBP29.11■■■□□ 2.25
PDZD3-201ENST00000322712 CAMSAP2Q08AD1 1489 aa29.1■■■□□ 2.25
PDZD3-201ENST00000322712 AKNAQ7Z591 1439 aa29.08■■■□□ 2.25
PDZD3-201ENST00000322712 ITSN2Q9NZM3 1697 aa29.07■■■□□ 2.24
PDZD3-201ENST00000322712 TRIM52Q96A61 297 aa29.06■■■□□ 2.24
PDZD3-201ENST00000322712 ABCC10Q5T3U5 1492 aa29.04■■■□□ 2.24
PDZD3-201ENST00000322712 CDC42BPAQ5VT25 1732 aa29.02■■■□□ 2.24
PDZD3-201ENST00000322712 ROCK1Q13464 1354 aa29.01■■■□□ 2.23
PDZD3-201ENST00000322712 DENND4BO75064 1496 aaPredicted RBP29■■■□□ 2.23
PDZD3-201ENST00000322712 MIER1Q8N108 512 aa28.98■■■□□ 2.23
PDZD3-201ENST00000322712 UHRF1BP1LA0JNW5 1464 aa28.98■■■□□ 2.23
PDZD3-201ENST00000322712 ZCCHC11Q5TAX3 1644 aaKnown RBP28.95■■■□□ 2.22
PDZD3-201ENST00000322712 MPHOSPH9Q99550 1183 aa28.93■■■□□ 2.22
PDZD3-201ENST00000322712 TIMELESSQ9UNS1 1208 aa28.93■■■□□ 2.22
PDZD3-201ENST00000322712 PPP1R15AO75807 674 aaPredicted RBP28.93■■■□□ 2.22
PDZD3-201ENST00000322712 FOXD1Q16676 465 aa28.93■■■□□ 2.22
PDZD3-201ENST00000322712 KDM5BQ9UGL1 1544 aa28.91■■■□□ 2.22
PDZD3-201ENST00000322712 TONSLQ96HA7 1378 aa28.9■■■□□ 2.22
PDZD3-201ENST00000322712 NCOA1Q15788 1441 aa28.9■■■□□ 2.22
PDZD3-201ENST00000322712 CROCC2H7BZ55 1655 aa28.87■■■□□ 2.21
PDZD3-201ENST00000322712 SCAF1Q9H7N4 1312 aaKnown RBP28.86■■■□□ 2.21
PDZD3-201ENST00000322712 HNRNPMP52272 730 aaKnown RBP eCLIP28.85■■■□□ 2.21
PDZD3-201ENST00000322712 ADGBQ8N7X0 1667 aa28.83■■■□□ 2.21
PDZD3-201ENST00000322712 KCNH8Q96L42 1107 aa28.83■■■□□ 2.21
PDZD3-201ENST00000322712 CDC42BPBQ9Y5S2 1711 aa28.81■■■□□ 2.2
PDZD3-201ENST00000322712 TTC37Q6PGP7 1564 aa28.8■■■□□ 2.2
PDZD3-201ENST00000322712 ADGRL2O95490 1459 aa28.8■■■□□ 2.2
PDZD3-201ENST00000322712 HIRIP3Q9BW71 556 aaPredicted RBP28.78■■■□□ 2.2
PDZD3-201ENST00000322712 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.78■■■□□ 2.2
PDZD3-201ENST00000322712 ANKRD30AQ9BXX3 1397 aa28.78■■■□□ 2.2
PDZD3-201ENST00000322712 SLC4A1APQ9BWU0 796 aaKnown RBP28.77■■■□□ 2.2
PDZD3-201ENST00000322712 PREX2Q70Z35 1606 aa28.77■■■□□ 2.2
PDZD3-201ENST00000322712 SAMD9LQ8IVG5 1584 aa28.77■■■□□ 2.2
PDZD3-201ENST00000322712 C9orf84Q5VXU9 1444 aa28.76■■■□□ 2.2
PDZD3-201ENST00000322712 MBD5Q9P267 1494 aa28.74■■■□□ 2.19
PDZD3-201ENST00000322712 TSPY4P0CV99 314 aa28.73■■■□□ 2.19
PDZD3-201ENST00000322712 TSPY10P0CW01 314 aa28.73■■■□□ 2.19
PDZD3-201ENST00000322712 PZPP20742 1482 aa28.7■■■□□ 2.19
PDZD3-201ENST00000322712 ANKRD50Q9ULJ7 1429 aa28.7■■■□□ 2.19
PDZD3-201ENST00000322712 SHANK2Q9UPX8 1470 aa28.7■■■□□ 2.18
PDZD3-201ENST00000322712 ARHGAP5Q13017 1502 aa28.7■■■□□ 2.18
PDZD3-201ENST00000322712 ANKRD30BQ9BXX2 1392 aa28.69■■■□□ 2.18
PDZD3-201ENST00000322712 YTHDC1Q96MU7 727 aaKnown RBP28.69■■■□□ 2.18
PDZD3-201ENST00000322712 WDR7Q9Y4E6 1490 aa28.67■■■□□ 2.18
PDZD3-201ENST00000322712 NPM1P06748 294 aaKnown RBP eCLIP28.67■■■□□ 2.18
PDZD3-201ENST00000322712 ARHGEF5Q12774 1597 aa28.67■■■□□ 2.18
PDZD3-201ENST00000322712 MYO5CQ9NQX4 1742 aa28.67■■■□□ 2.18
PDZD3-201ENST00000322712 SYCP2Q9BX26 1530 aa28.65■■■□□ 2.18
PDZD3-201ENST00000322712 RIMBP3CA6NJZ7 1639 aa28.65■■■□□ 2.18
PDZD3-201ENST00000322712 RIMBP3BA6NNM3 1639 aa28.65■■■□□ 2.18
PDZD3-201ENST00000322712 RIMBP3Q9UFD9 1639 aa28.65■■■□□ 2.18
PDZD3-201ENST00000322712 CCDC141Q6ZP82 1450 aa28.64■■■□□ 2.17
PDZD3-201ENST00000322712 ASXL2Q76L83 1435 aa28.64■■■□□ 2.17
PDZD3-201ENST00000322712 ACIN1Q9UKV3 1341 aaKnown RBP28.63■■■□□ 2.17
PDZD3-201ENST00000322712 L3MBTL2Q969R5 705 aa28.63■■■□□ 2.17
PDZD3-201ENST00000322712 KIF15Q9NS87 1388 aa28.62■■■□□ 2.17
PDZD3-201ENST00000322712 CYB5RLQ6IPT4 315 aa28.62■■■□□ 2.17
PDZD3-201ENST00000322712 RPRD2Q5VT52 1461 aaKnown RBP28.58■■■□□ 2.17
PDZD3-201ENST00000322712 DDX10Q13206 875 aaKnown RBP28.58■■■□□ 2.17
PDZD3-201ENST00000322712 PKD2Q13563 968 aa28.58■■■□□ 2.17
PDZD3-201ENST00000322712 NUP155O75694 1391 aa28.57■■■□□ 2.16
PDZD3-201ENST00000322712 PLCH2O75038 1416 aa28.55■■■□□ 2.16
PDZD3-201ENST00000322712 ARHGEF12Q9NZN5 1544 aa28.54■■■□□ 2.16
PDZD3-201ENST00000322712 RSPH4AQ5TD94 716 aa28.54■■■□□ 2.16
PDZD3-201ENST00000322712 PELP1Q8IZL8 1130 aaKnown RBP28.54■■■□□ 2.16
PDZD3-201ENST00000322712 KIAA1107Q9UPP5 1409 aa28.52■■■□□ 2.16
PDZD3-201ENST00000322712 CENPBP07199 599 aaPredicted RBP28.51■■■□□ 2.15
PDZD3-201ENST00000322712 TEX14Q8IWB6 1497 aa28.49■■■□□ 2.15
PDZD3-201ENST00000322712 ABCA9Q8IUA7 1624 aa28.48■■■□□ 2.15
PDZD3-201ENST00000322712 EFCAB2Q5VUJ9 269 aa28.47■■■□□ 2.15
PDZD3-201ENST00000322712 NBPF8Q3BBV2 869 aa28.46■■■□□ 2.15
PDZD3-201ENST00000322712 PLEKHH2Q8IVE3 1493 aa28.44■■■□□ 2.14
PDZD3-201ENST00000322712 MAST1Q9Y2H9 1570 aa28.42■■■□□ 2.14
PDZD3-201ENST00000322712 TRAPPC8Q9Y2L5 1435 aa28.41■■■□□ 2.14
PDZD3-201ENST00000322712 KDM5DQ9BY66 1539 aa28.41■■■□□ 2.14
PDZD3-201ENST00000322712 ARAP3Q8WWN8 1544 aa28.4■■■□□ 2.14
PDZD3-201ENST00000322712 HSPA5P11021 654 aaKnown RBP28.4■■■□□ 2.14
PDZD3-201ENST00000322712 ABCC1P33527 1531 aa28.39■■■□□ 2.14
PDZD3-201ENST00000322712 FANCAO15360 1455 aa28.37■■■□□ 2.13
PDZD3-201ENST00000322712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.37■■■□□ 2.13
PDZD3-201ENST00000322712 AFAP1Q8N556 730 aa28.36■■■□□ 2.13
PDZD3-201ENST00000322712 FAM135AQ9P2D6 1515 aa28.34■■■□□ 2.13
PDZD3-201ENST00000322712 PLXNC1O60486 1568 aa28.34■■■□□ 2.13
PDZD3-201ENST00000322712 EIF4G2P78344 907 aaKnown RBP eCLIP28.32■■■□□ 2.12
PDZD3-201ENST00000322712 CD109Q6YHK3 1445 aa28.3■■■□□ 2.12
PDZD3-201ENST00000322712 ZNF326Q5BKZ1 582 aaKnown RBP28.29■■■□□ 2.12
PDZD3-201ENST00000322712 DUOX2Q9NRD8 1548 aa28.27■■■□□ 2.12
PDZD3-201ENST00000322712 UNC13BO14795 1591 aa28.26■■■□□ 2.11
PDZD3-201ENST00000322712 SPAG9O60271 1321 aaKnown RBP28.26■■■□□ 2.11
PDZD3-201ENST00000322712 WASHC2AQ641Q2 1341 aa28.26■■■□□ 2.11
PDZD3-201ENST00000322712 ADGRL1O94910 1474 aa28.25■■■□□ 2.11
PDZD3-201ENST00000322712 C11orf95C9JLR9 678 aaPredicted RBP28.22■■■□□ 2.11
PDZD3-201ENST00000322712 GTF3C3Q9Y5Q9 886 aa28.22■■■□□ 2.11
PDZD3-201ENST00000322712 SCAPERQ9BY12 1400 aa28.21■■■□□ 2.11
PDZD3-201ENST00000322712 ERBINQ96RT1 1412 aa28.2■■■□□ 2.1
PDZD3-201ENST00000322712 ZFYVE16Q7Z3T8 1539 aa28.19■■■□□ 2.1
PDZD3-201ENST00000322712 KDM2AQ9Y2K7 1162 aa28.18■■■□□ 2.1
PDZD3-201ENST00000322712 PLA2R1Q13018 1463 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms