RNA–Protein interactions for RNA: ENST00000321256.9

NCBP2-201, Transcript of nuclear cap binding protein subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCBP2, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-201ENST00000321256 CAMSAP2Q08AD1 1489 aa18.2■□□□□ 0.5
NCBP2-201ENST00000321256 GCC2Q8IWJ2 1684 aa18.2■□□□□ 0.5
NCBP2-201ENST00000321256 ITSN2Q9NZM3 1697 aa18.2■□□□□ 0.5
NCBP2-201ENST00000321256 DNMT1P26358 1616 aaKnown RBP18.2■□□□□ 0.5
NCBP2-201ENST00000321256 KDM6BO15054 1643 aa18.18■□□□□ 0.5
NCBP2-201ENST00000321256 TRIM52Q96A61 297 aa18.17■□□□□ 0.5
NCBP2-201ENST00000321256 ABCC10Q5T3U5 1492 aa18.16■□□□□ 0.5
NCBP2-201ENST00000321256 ROCK1Q13464 1354 aa18.15■□□□□ 0.5
NCBP2-201ENST00000321256 CDC42BPAQ5VT25 1732 aa18.12■□□□□ 0.49
NCBP2-201ENST00000321256 ABCC2Q92887 1545 aa18.11■□□□□ 0.49
NCBP2-201ENST00000321256 TIMELESSQ9UNS1 1208 aa18.1■□□□□ 0.49
NCBP2-201ENST00000321256 TONSLQ96HA7 1378 aa18.07■□□□□ 0.48
NCBP2-201ENST00000321256 DENND4BO75064 1496 aaPredicted RBP18.07■□□□□ 0.48
NCBP2-201ENST00000321256 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
NCBP2-201ENST00000321256 NCOA1Q15788 1441 aa18.06■□□□□ 0.48
NCBP2-201ENST00000321256 CROCC2H7BZ55 1655 aa18.05■□□□□ 0.48
NCBP2-201ENST00000321256 PPP1R15AO75807 674 aaPredicted RBP18.04■□□□□ 0.48
NCBP2-201ENST00000321256 FOXD1Q16676 465 aa18.03■□□□□ 0.48
NCBP2-201ENST00000321256 KCNH8Q96L42 1107 aa18.03■□□□□ 0.48
NCBP2-201ENST00000321256 ADGBQ8N7X0 1667 aa18.03■□□□□ 0.48
NCBP2-201ENST00000321256 HNRNPMP52272 730 aaKnown RBP eCLIP18.03■□□□□ 0.48
NCBP2-201ENST00000321256 ANKRD30AQ9BXX3 1397 aa18.02■□□□□ 0.48
NCBP2-201ENST00000321256 ADGRL2O95490 1459 aa18.02■□□□□ 0.48
NCBP2-201ENST00000321256 MIER1Q8N108 512 aa18.01■□□□□ 0.47
NCBP2-201ENST00000321256 TTC37Q6PGP7 1564 aa18.01■□□□□ 0.47
NCBP2-201ENST00000321256 PREX2Q70Z35 1606 aa18■□□□□ 0.47
NCBP2-201ENST00000321256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18■□□□□ 0.47
NCBP2-201ENST00000321256 C9orf84Q5VXU9 1444 aa18■□□□□ 0.47
NCBP2-201ENST00000321256 TSPY4P0CV99 314 aa18■□□□□ 0.47
NCBP2-201ENST00000321256 TSPY10P0CW01 314 aa18■□□□□ 0.47
NCBP2-201ENST00000321256 CDC42BPBQ9Y5S2 1711 aa17.99■□□□□ 0.47
NCBP2-201ENST00000321256 UHRF1BP1LA0JNW5 1464 aa17.99■□□□□ 0.47
NCBP2-201ENST00000321256 ZCCHC11Q5TAX3 1644 aaKnown RBP17.99■□□□□ 0.47
NCBP2-201ENST00000321256 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
NCBP2-201ENST00000321256 SAMD9LQ8IVG5 1584 aa17.98■□□□□ 0.47
NCBP2-201ENST00000321256 SHANK2Q9UPX8 1470 aa17.98■□□□□ 0.47
NCBP2-201ENST00000321256 ACIN1Q9UKV3 1341 aaKnown RBP17.98■□□□□ 0.47
NCBP2-201ENST00000321256 ARHGAP5Q13017 1502 aa17.97■□□□□ 0.47
NCBP2-201ENST00000321256 KDM5BQ9UGL1 1544 aa17.97■□□□□ 0.47
NCBP2-201ENST00000321256 MBD5Q9P267 1494 aa17.96■□□□□ 0.47
NCBP2-201ENST00000321256 ANKRD50Q9ULJ7 1429 aa17.96■□□□□ 0.47
NCBP2-201ENST00000321256 RIMBP3CA6NJZ7 1639 aa17.95■□□□□ 0.46
NCBP2-201ENST00000321256 RIMBP3BA6NNM3 1639 aa17.95■□□□□ 0.46
NCBP2-201ENST00000321256 RIMBP3Q9UFD9 1639 aa17.95■□□□□ 0.46
NCBP2-201ENST00000321256 DNAJC5Q9H3Z4 198 aa17.94■□□□□ 0.46
NCBP2-201ENST00000321256 ARHGEF5Q12774 1597 aa17.94■□□□□ 0.46
NCBP2-201ENST00000321256 CCDC141Q6ZP82 1450 aa17.93■□□□□ 0.46
NCBP2-201ENST00000321256 SYCP2Q9BX26 1530 aa17.93■□□□□ 0.46
NCBP2-201ENST00000321256 PZPP20742 1482 aa17.92■□□□□ 0.46
NCBP2-201ENST00000321256 HIRIP3Q9BW71 556 aaPredicted RBP17.92■□□□□ 0.46
NCBP2-201ENST00000321256 ANKRD30BQ9BXX2 1392 aa17.92■□□□□ 0.46
NCBP2-201ENST00000321256 KIF15Q9NS87 1388 aa17.92■□□□□ 0.46
NCBP2-201ENST00000321256 MYO5CQ9NQX4 1742 aa17.91■□□□□ 0.46
NCBP2-201ENST00000321256 RSPH4AQ5TD94 716 aa17.89■□□□□ 0.45
NCBP2-201ENST00000321256 PLCH2O75038 1416 aa17.87■□□□□ 0.45
NCBP2-201ENST00000321256 NUP155O75694 1391 aa17.86■□□□□ 0.45
NCBP2-201ENST00000321256 L3MBTL2Q969R5 705 aa17.86■□□□□ 0.45
NCBP2-201ENST00000321256 PKD2Q13563 968 aa17.86■□□□□ 0.45
NCBP2-201ENST00000321256 YTHDC1Q96MU7 727 aaKnown RBP17.86■□□□□ 0.45
NCBP2-201ENST00000321256 RPRD2Q5VT52 1461 aaKnown RBP17.85■□□□□ 0.45
NCBP2-201ENST00000321256 KIAA1107Q9UPP5 1409 aa17.84■□□□□ 0.45
NCBP2-201ENST00000321256 PLEKHH2Q8IVE3 1493 aa17.84■□□□□ 0.45
NCBP2-201ENST00000321256 EFCAB2Q5VUJ9 269 aa17.84■□□□□ 0.45
NCBP2-201ENST00000321256 WDR7Q9Y4E6 1490 aa17.83■□□□□ 0.45
NCBP2-201ENST00000321256 ARHGEF12Q9NZN5 1544 aa17.83■□□□□ 0.44
NCBP2-201ENST00000321256 DDX10Q13206 875 aaKnown RBP17.81■□□□□ 0.44
NCBP2-201ENST00000321256 CYB5RLQ6IPT4 315 aa17.81■□□□□ 0.44
NCBP2-201ENST00000321256 CENPBP07199 599 aaPredicted RBP17.79■□□□□ 0.44
NCBP2-201ENST00000321256 TEX14Q8IWB6 1497 aa17.79■□□□□ 0.44
NCBP2-201ENST00000321256 MAST1Q9Y2H9 1570 aa17.79■□□□□ 0.44
NCBP2-201ENST00000321256 ABCC1P33527 1531 aa17.78■□□□□ 0.44
NCBP2-201ENST00000321256 KDM5DQ9BY66 1539 aa17.77■□□□□ 0.44
NCBP2-201ENST00000321256 ASXL2Q76L83 1435 aa17.77■□□□□ 0.44
NCBP2-201ENST00000321256 TRAPPC8Q9Y2L5 1435 aa17.76■□□□□ 0.43
NCBP2-201ENST00000321256 PLXNC1O60486 1568 aa17.74■□□□□ 0.43
NCBP2-201ENST00000321256 NBPF8Q3BBV2 869 aa17.74■□□□□ 0.43
NCBP2-201ENST00000321256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.74■□□□□ 0.432e-7■■■□□ 17.8
NCBP2-201ENST00000321256 NPM1P06748 294 aaKnown RBP eCLIP17.73■□□□□ 0.43
NCBP2-201ENST00000321256 FAM135AQ9P2D6 1515 aa17.73■□□□□ 0.43
NCBP2-201ENST00000321256 AFAP1Q8N556 730 aa17.73■□□□□ 0.43
NCBP2-201ENST00000321256 ARAP3Q8WWN8 1544 aa17.72■□□□□ 0.43
NCBP2-201ENST00000321256 HSPA5P11021 654 aaKnown RBP17.72■□□□□ 0.43
NCBP2-201ENST00000321256 FANCAO15360 1455 aa17.72■□□□□ 0.43
NCBP2-201ENST00000321256 ABCA9Q8IUA7 1624 aa17.71■□□□□ 0.43
NCBP2-201ENST00000321256 DUOX2Q9NRD8 1548 aa17.7■□□□□ 0.42
NCBP2-201ENST00000321256 EIF4G2P78344 907 aaKnown RBP eCLIP17.7■□□□□ 0.42
NCBP2-201ENST00000321256 SPAG9O60271 1321 aaKnown RBP17.7■□□□□ 0.42
NCBP2-201ENST00000321256 ZNF326Q5BKZ1 582 aaKnown RBP17.67■□□□□ 0.42
NCBP2-201ENST00000321256 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
NCBP2-201ENST00000321256 UNC13BO14795 1591 aa17.67■□□□□ 0.42
NCBP2-201ENST00000321256 ERBINQ96RT1 1412 aa17.67■□□□□ 0.42
NCBP2-201ENST00000321256 ADGRL1O94910 1474 aa17.65■□□□□ 0.42
NCBP2-201ENST00000321256 ZFYVE16Q7Z3T8 1539 aa17.64■□□□□ 0.42
NCBP2-201ENST00000321256 SCAPERQ9BY12 1400 aa17.64■□□□□ 0.41
NCBP2-201ENST00000321256 MYT1LQ9UL68 1186 aa17.64■□□□□ 0.41
NCBP2-201ENST00000321256 RTEL1-TNFRSF6BF6WH68 1400 aa17.63■□□□□ 0.41
NCBP2-201ENST00000321256 WASHC2AQ641Q2 1341 aa17.62■□□□□ 0.41
NCBP2-201ENST00000321256 IQGAP3Q86VI3 1631 aa17.61■□□□□ 0.41
NCBP2-201ENST00000321256 MAGI2Q86UL8 1455 aa17.6■□□□□ 0.41
NCBP2-201ENST00000321256 KDM2AQ9Y2K7 1162 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms