RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 NEUROD1Q13562 356 aa26.72■■□□□ 1.87
CCDC43-201ENST00000315286 CAMSAP2Q08AD1 1489 aa26.7■■□□□ 1.86
CCDC43-201ENST00000315286 KDM6BO15054 1643 aa26.68■■□□□ 1.86
CCDC43-201ENST00000315286 ABCC10Q5T3U5 1492 aa26.68■■□□□ 1.86
CCDC43-201ENST00000315286 ROCK1Q13464 1354 aa26.67■■□□□ 1.86
CCDC43-201ENST00000315286 CDC42BPAQ5VT25 1732 aa26.66■■□□□ 1.86
CCDC43-201ENST00000315286 ZNF777Q9ULD5 760 aaPredicted RBP26.66■■□□□ 1.86
CCDC43-201ENST00000315286 TIMELESSQ9UNS1 1208 aa26.62■■□□□ 1.85
CCDC43-201ENST00000315286 ABCC2Q92887 1545 aa26.6■■□□□ 1.85
CCDC43-201ENST00000315286 TRIM52Q96A61 297 aa26.59■■□□□ 1.85
CCDC43-201ENST00000315286 DENND4BO75064 1496 aaPredicted RBP26.54■■□□□ 1.84
CCDC43-201ENST00000315286 CROCC2H7BZ55 1655 aa26.53■■□□□ 1.84
CCDC43-201ENST00000315286 ADGBQ8N7X0 1667 aa26.51■■□□□ 1.83
CCDC43-201ENST00000315286 NCOA1Q15788 1441 aa26.51■■□□□ 1.83
CCDC43-201ENST00000315286 MPHOSPH9Q99550 1183 aa26.5■■□□□ 1.83
CCDC43-201ENST00000315286 PPP1R15AO75807 674 aaPredicted RBP26.5■■□□□ 1.83
CCDC43-201ENST00000315286 ADGRL2O95490 1459 aa26.48■■□□□ 1.83
CCDC43-201ENST00000315286 ACIN1Q9UKV3 1341 aaKnown RBP26.47■■□□□ 1.83
CCDC43-201ENST00000315286 CDC42BPBQ9Y5S2 1711 aa26.47■■□□□ 1.83
CCDC43-201ENST00000315286 TONSLQ96HA7 1378 aa26.47■■□□□ 1.83
CCDC43-201ENST00000315286 UHRF1BP1LA0JNW5 1464 aa26.46■■□□□ 1.83
CCDC43-201ENST00000315286 PREX2Q70Z35 1606 aa26.45■■□□□ 1.83
CCDC43-201ENST00000315286 ANKRD30AQ9BXX3 1397 aa26.43■■□□□ 1.82
CCDC43-201ENST00000315286 ZCCHC11Q5TAX3 1644 aaKnown RBP26.43■■□□□ 1.82
CCDC43-201ENST00000315286 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.43■■□□□ 1.82
CCDC43-201ENST00000315286 TTC37Q6PGP7 1564 aa26.42■■□□□ 1.82
CCDC43-201ENST00000315286 HNRNPMP52272 730 aaKnown RBP eCLIP26.42■■□□□ 1.82
CCDC43-201ENST00000315286 KDM5BQ9UGL1 1544 aa26.41■■□□□ 1.82
CCDC43-201ENST00000315286 MIER1Q8N108 512 aa26.4■■□□□ 1.82
CCDC43-201ENST00000315286 SHANK2Q9UPX8 1470 aa26.4■■□□□ 1.82
CCDC43-201ENST00000315286 SAMD9LQ8IVG5 1584 aa26.4■■□□□ 1.82
CCDC43-201ENST00000315286 C9orf84Q5VXU9 1444 aa26.39■■□□□ 1.82
CCDC43-201ENST00000315286 KCNH8Q96L42 1107 aa26.39■■□□□ 1.82
CCDC43-201ENST00000315286 MBD5Q9P267 1494 aa26.39■■□□□ 1.81
CCDC43-201ENST00000315286 ARHGEF5Q12774 1597 aa26.38■■□□□ 1.81
CCDC43-201ENST00000315286 FOXD1Q16676 465 aa26.38■■□□□ 1.81
CCDC43-201ENST00000315286 TSPY4P0CV99 314 aa26.37■■□□□ 1.81
CCDC43-201ENST00000315286 TSPY10P0CW01 314 aa26.37■■□□□ 1.81
CCDC43-201ENST00000315286 SLC4A1APQ9BWU0 796 aaKnown RBP26.34■■□□□ 1.81
CCDC43-201ENST00000315286 ARHGAP5Q13017 1502 aa26.34■■□□□ 1.81
CCDC43-201ENST00000315286 ANKRD50Q9ULJ7 1429 aa26.33■■□□□ 1.81
CCDC43-201ENST00000315286 MYO5CQ9NQX4 1742 aa26.33■■□□□ 1.81
CCDC43-201ENST00000315286 PZPP20742 1482 aa26.31■■□□□ 1.8
CCDC43-201ENST00000315286 CCDC141Q6ZP82 1450 aa26.31■■□□□ 1.8
CCDC43-201ENST00000315286 ANKRD30BQ9BXX2 1392 aa26.31■■□□□ 1.8
CCDC43-201ENST00000315286 RSPH4AQ5TD94 716 aa26.3■■□□□ 1.8
CCDC43-201ENST00000315286 OSCARQ8IYS5 282 aa26.3■■□□□ 1.8
CCDC43-201ENST00000315286 SYCP2Q9BX26 1530 aa26.28■■□□□ 1.8
CCDC43-201ENST00000315286 KIF15Q9NS87 1388 aa26.25■■□□□ 1.79
CCDC43-201ENST00000315286 PLCH2O75038 1416 aa26.25■■□□□ 1.79
CCDC43-201ENST00000315286 KIAA1107Q9UPP5 1409 aa26.22■■□□□ 1.79
CCDC43-201ENST00000315286 RPRD2Q5VT52 1461 aaKnown RBP26.21■■□□□ 1.79
CCDC43-201ENST00000315286 PLEKHH2Q8IVE3 1493 aa26.21■■□□□ 1.79
CCDC43-201ENST00000315286 L3MBTL2Q969R5 705 aa26.19■■□□□ 1.78
CCDC43-201ENST00000315286 HIRIP3Q9BW71 556 aaPredicted RBP26.19■■□□□ 1.78
CCDC43-201ENST00000315286 MAST1Q9Y2H9 1570 aa26.18■■□□□ 1.78
CCDC43-201ENST00000315286 EFCAB2Q5VUJ9 269 aa26.18■■□□□ 1.78
CCDC43-201ENST00000315286 NUP155O75694 1391 aa26.18■■□□□ 1.78
CCDC43-201ENST00000315286 ARHGEF12Q9NZN5 1544 aa26.17■■□□□ 1.78
CCDC43-201ENST00000315286 PKD2Q13563 968 aa26.17■■□□□ 1.78
CCDC43-201ENST00000315286 WDR7Q9Y4E6 1490 aa26.16■■□□□ 1.78
CCDC43-201ENST00000315286 KDM5DQ9BY66 1539 aa26.13■■□□□ 1.77
CCDC43-201ENST00000315286 TEX14Q8IWB6 1497 aa26.11■■□□□ 1.77
CCDC43-201ENST00000315286 ABCC1P33527 1531 aa26.09■■□□□ 1.77
CCDC43-201ENST00000315286 ARAP3Q8WWN8 1544 aa26.08■■□□□ 1.77
CCDC43-201ENST00000315286 DDX10Q13206 875 aaKnown RBP26.07■■□□□ 1.76
CCDC43-201ENST00000315286 PLXNC1O60486 1568 aa26.07■■□□□ 1.76
CCDC43-201ENST00000315286 ASXL2Q76L83 1435 aa26.06■■□□□ 1.76
CCDC43-201ENST00000315286 CENPBP07199 599 aaPredicted RBP26.05■■□□□ 1.76
CCDC43-201ENST00000315286 YTHDC1Q96MU7 727 aaKnown RBP26.05■■□□□ 1.76
CCDC43-201ENST00000315286 TRAPPC8Q9Y2L5 1435 aa26.05■■□□□ 1.76
CCDC43-201ENST00000315286 ABCA9Q8IUA7 1624 aa26.03■■□□□ 1.76
CCDC43-201ENST00000315286 NBPF8Q3BBV2 869 aa26.02■■□□□ 1.76
CCDC43-201ENST00000315286 FAM135AQ9P2D6 1515 aa26■■□□□ 1.75
CCDC43-201ENST00000315286 DUOX2Q9NRD8 1548 aa25.99■■□□□ 1.75
CCDC43-201ENST00000315286 NPM1P06748 294 aaKnown RBP eCLIP25.99■■□□□ 1.75
CCDC43-201ENST00000315286 UNC13BO14795 1591 aa25.98■■□□□ 1.75
CCDC43-201ENST00000315286 HSPA5P11021 654 aaKnown RBP25.97■■□□□ 1.75
CCDC43-201ENST00000315286 FANCAO15360 1455 aa25.97■■□□□ 1.75
CCDC43-201ENST00000315286 AFAP1Q8N556 730 aa25.97■■□□□ 1.75
CCDC43-201ENST00000315286 EIF4G2P78344 907 aaKnown RBP eCLIP25.94■■□□□ 1.74
CCDC43-201ENST00000315286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.94■■□□□ 1.742e-6■□□□□ 10.7
CCDC43-201ENST00000315286 SPAG9O60271 1321 aaKnown RBP25.94■■□□□ 1.74
CCDC43-201ENST00000315286 ERBINQ96RT1 1412 aa25.93■■□□□ 1.74
CCDC43-201ENST00000315286 RTEL1-TNFRSF6BF6WH68 1400 aa25.91■■□□□ 1.74
CCDC43-201ENST00000315286 IQGAP3Q86VI3 1631 aa25.89■■□□□ 1.74
CCDC43-201ENST00000315286 ZFYVE16Q7Z3T8 1539 aa25.89■■□□□ 1.73
CCDC43-201ENST00000315286 SCAF1Q9H7N4 1312 aaKnown RBP25.88■■□□□ 1.73
CCDC43-201ENST00000315286 ADGRL1O94910 1474 aa25.87■■□□□ 1.73
CCDC43-201ENST00000315286 MAGI2Q86UL8 1455 aa25.87■■□□□ 1.73
CCDC43-201ENST00000315286 SCAPERQ9BY12 1400 aa25.86■■□□□ 1.73
CCDC43-201ENST00000315286 WASHC2AQ641Q2 1341 aa25.83■■□□□ 1.72
CCDC43-201ENST00000315286 ZNF326Q5BKZ1 582 aaKnown RBP25.81■■□□□ 1.72
CCDC43-201ENST00000315286 INO80Q9ULG1 1556 aaPredicted RBP25.81■■□□□ 1.72
CCDC43-201ENST00000315286 ATP7AQ04656 1500 aa25.81■■□□□ 1.72
CCDC43-201ENST00000315286 PLA2R1Q13018 1463 aa25.81■■□□□ 1.72
CCDC43-201ENST00000315286 SPATA31E1Q6ZUB1 1445 aa25.8■■□□□ 1.72
CCDC43-201ENST00000315286 UHRF1BP1Q6BDS2 1440 aa25.78■■□□□ 1.72
CCDC43-201ENST00000315286 CCDC144AA2RUR9 1427 aa25.78■■□□□ 1.72
CCDC43-201ENST00000315286 CD109Q6YHK3 1445 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms