RNA–Protein interactions for RNA: ENST00000299954.13

PITPNC1-201, Transcript of phosphatidylinositol transfer protein cytoplasmic 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PITPNC1, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNC1-201ENST00000299954 ZNF330Q9Y3S2 320 aaPredicted RBP23.27■■□□□ 1.32
PITPNC1-201ENST00000299954 MLECQ14165 292 aa23.26■■□□□ 1.31
PITPNC1-201ENST00000299954 ITPRIPQ8IWB1 547 aa23.26■■□□□ 1.31
PITPNC1-201ENST00000299954 KIAA1211Q6ZU35 1233 aa23.25■■□□□ 1.31
PITPNC1-201ENST00000299954 KIAA2012Q0VF49 1180 aa23.25■■□□□ 1.31
PITPNC1-201ENST00000299954 RTF1Q92541 710 aaKnown RBP23.24■■□□□ 1.31
PITPNC1-201ENST00000299954 STK26Q9P289 416 aa23.24■■□□□ 1.31
PITPNC1-201ENST00000299954 NOL8Q76FK4 1167 aaKnown RBP23.24■■□□□ 1.31
PITPNC1-201ENST00000299954 HSP90B1P14625 803 aaKnown RBP23.23■■□□□ 1.31
PITPNC1-201ENST00000299954 GBP4Q96PP9 640 aa23.23■■□□□ 1.31
PITPNC1-201ENST00000299954 MFAP1P55081 439 aaKnown RBP23.23■■□□□ 1.31
PITPNC1-201ENST00000299954 HSPA5P11021 654 aaKnown RBP23.21■■□□□ 1.31
PITPNC1-201ENST00000299954 ANO8Q9HCE9 1232 aaPredicted RBP23.19■■□□□ 1.3
PITPNC1-201ENST00000299954 FOXD1Q16676 465 aa23.19■■□□□ 1.3
PITPNC1-201ENST00000299954 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
PITPNC1-201ENST00000299954 CREBRFQ8IUR6 639 aa23.18■■□□□ 1.3
PITPNC1-201ENST00000299954 TNNT3P45378 269 aaPredicted RBP23.17■■□□□ 1.3
PITPNC1-201ENST00000299954 FOXD4L5Q5VV16 416 aaPredicted RBP23.16■■□□□ 1.3
PITPNC1-201ENST00000299954 FOXD4L4Q8WXT5 416 aaPredicted RBP23.16■■□□□ 1.3
PITPNC1-201ENST00000299954 RCAN3Q9UKA8 241 aa23.15■■□□□ 1.3
PITPNC1-201ENST00000299954 PRM3Q9NNZ6 103 aa23.14■■□□□ 1.3
PITPNC1-201ENST00000299954 PAK3O75914 559 aaPredicted RBP23.13■■□□□ 1.29
PITPNC1-201ENST00000299954 GOLGA6L3A6NEY3 463 aa23.13■■□□□ 1.29
PITPNC1-201ENST00000299954 U2AF1L5P0DN76 240 aaPredicted RBP23.12■■□□□ 1.29
PITPNC1-201ENST00000299954 U2AF1Q01081 240 aaKnown RBP eCLIP23.12■■□□□ 1.29
PITPNC1-201ENST00000299954 TRIM6-TRIM34B2RNG4 842 aa23.11■■□□□ 1.29
PITPNC1-201ENST00000299954 CHMP3Q9Y3E7 222 aa23.11■■□□□ 1.29
PITPNC1-201ENST00000299954 A0A0U1RQG5 324 aaPredicted RBP23.1■■□□□ 1.29
PITPNC1-201ENST00000299954 IPO8O15397 1037 aaKnown RBP23.1■■□□□ 1.29
PITPNC1-201ENST00000299954 RWDD1Q9H446 243 aaPredicted RBP23.09■■□□□ 1.29
PITPNC1-201ENST00000299954 KTN1Q86UP2 1357 aaKnown RBP23.09■■□□□ 1.29
PITPNC1-201ENST00000299954 CCNB3Q8WWL7 1395 aa23.07■■□□□ 1.28
PITPNC1-201ENST00000299954 CLUAP1Q96AJ1 413 aa23.06■■□□□ 1.28
PITPNC1-201ENST00000299954 CCER2I3L3R5 266 aa23.06■■□□□ 1.28
PITPNC1-201ENST00000299954 CCDC146Q8IYE0 955 aa23.06■■□□□ 1.28
PITPNC1-201ENST00000299954 SYAP1Q96A49 352 aaPredicted RBP23.05■■□□□ 1.28
PITPNC1-201ENST00000299954 CFAP44Q96MT7 982 aa23.05■■□□□ 1.28
PITPNC1-201ENST00000299954 TPM4P67936 248 aa23.04■■□□□ 1.28
PITPNC1-201ENST00000299954 PTMSP20962 102 aa23.04■■□□□ 1.28
PITPNC1-201ENST00000299954 GORABQ5T7V8 394 aa23.04■■□□□ 1.28
PITPNC1-201ENST00000299954 CSB-PGBD3P0DP91 1061 aa23.03■■□□□ 1.28
PITPNC1-201ENST00000299954 SLC4A10Q6U841 1118 aa23.02■■□□□ 1.28
PITPNC1-201ENST00000299954 RASSF8Q8NHQ8 419 aa23.02■■□□□ 1.28
PITPNC1-201ENST00000299954 TSHZ2Q9NRE2 1034 aa23.02■■□□□ 1.28
PITPNC1-201ENST00000299954 HDGFL2Q7Z4V5 671 aaPredicted RBP23.01■■□□□ 1.27
PITPNC1-201ENST00000299954 HTATSF1O43719 755 aaKnown RBP23.01■■□□□ 1.27
PITPNC1-201ENST00000299954 TCERG1O14776 1098 aaKnown RBP23.01■■□□□ 1.27
PITPNC1-201ENST00000299954 KANK1Q14678 1352 aa23.01■■□□□ 1.27
PITPNC1-201ENST00000299954 SMC4Q9NTJ3 1288 aa23.01■■□□□ 1.27
PITPNC1-201ENST00000299954 GOLGA6L1Q8N7Z2 621 aa23■■□□□ 1.27
PITPNC1-201ENST00000299954 CALD1Q05682 793 aaKnown RBP23■■□□□ 1.27
PITPNC1-201ENST00000299954 GGT6Q6P531 493 aa23■■□□□ 1.27
PITPNC1-201ENST00000299954 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
PITPNC1-201ENST00000299954 TNIKQ9UKE5 1360 aa22.99■■□□□ 1.27
PITPNC1-201ENST00000299954 IPO9Q96P70 1041 aaKnown RBP22.98■■□□□ 1.27
PITPNC1-201ENST00000299954 EIF4G1Q04637 1599 aaKnown RBP22.97■■□□□ 1.27
PITPNC1-201ENST00000299954 FOXD4L6Q3SYB3 417 aaPredicted RBP22.97■■□□□ 1.27
PITPNC1-201ENST00000299954 FOXD4L3Q6VB84 417 aaPredicted RBP22.97■■□□□ 1.27
PITPNC1-201ENST00000299954 PKD2Q13563 968 aa22.97■■□□□ 1.27
PITPNC1-201ENST00000299954 CCDC9Q9Y3X0 531 aaKnown RBP22.96■■□□□ 1.27
PITPNC1-201ENST00000299954 SLC4A3P48751 1232 aa22.96■■□□□ 1.27
PITPNC1-201ENST00000299954 KIF27Q86VH2 1401 aa22.96■■□□□ 1.27
PITPNC1-201ENST00000299954 PMFBP1Q8TBY8 1022 aa22.96■■□□□ 1.27
PITPNC1-201ENST00000299954 EEA1Q15075 1411 aa22.96■■□□□ 1.27
PITPNC1-201ENST00000299954 TAF7LQ5H9L4 462 aa22.95■■□□□ 1.27
PITPNC1-201ENST00000299954 CEP164Q9UPV0 1460 aa22.95■■□□□ 1.26
PITPNC1-201ENST00000299954 ROCK2O75116 1388 aaKnown RBP22.94■■□□□ 1.26
PITPNC1-201ENST00000299954 TOMM22Q9NS69 142 aa22.93■■□□□ 1.26
PITPNC1-201ENST00000299954 TRHP20396 242 aaPredicted RBP22.92■■□□□ 1.26
PITPNC1-201ENST00000299954 STK31Q9BXU1 1019 aa22.92■■□□□ 1.26
PITPNC1-201ENST00000299954 PES1O00541 588 aaKnown RBP22.91■■□□□ 1.26
PITPNC1-201ENST00000299954 NUTM2DQ5VT03 806 aaPredicted RBP22.91■■□□□ 1.26
PITPNC1-201ENST00000299954 GPATCH3Q96I76 525 aa22.91■■□□□ 1.26
PITPNC1-201ENST00000299954 VPS53Q5VIR6 699 aa22.89■■□□□ 1.26
PITPNC1-201ENST00000299954 HDGFP51858 240 aaKnown RBP22.88■■□□□ 1.25
PITPNC1-201ENST00000299954 CCAR2Q8N163 923 aaKnown RBP22.88■■□□□ 1.25
PITPNC1-201ENST00000299954 WWC1Q8IX03 1113 aa22.87■■□□□ 1.25
PITPNC1-201ENST00000299954 SETD5Q9C0A6 1442 aa22.86■■□□□ 1.25
PITPNC1-201ENST00000299954 PATL2C9JE40 543 aaKnown RBP22.86■■□□□ 1.25
PITPNC1-201ENST00000299954 RRP7AQ9Y3A4 280 aaKnown RBP22.85■■□□□ 1.25
PITPNC1-201ENST00000299954 FBXO3Q9UK99 471 aa22.85■■□□□ 1.25
PITPNC1-201ENST00000299954 TPM3P06753 285 aa22.84■■□□□ 1.25
PITPNC1-201ENST00000299954 HSP90AA2PQ14568 343 aaPredicted RBP22.84■■□□□ 1.25
PITPNC1-201ENST00000299954 LTV1Q96GA3 475 aaPredicted RBP22.84■■□□□ 1.25
PITPNC1-201ENST00000299954 SF3A1Q15459 793 aaKnown RBP22.84■■□□□ 1.25
PITPNC1-201ENST00000299954 SPAG9O60271 1321 aaKnown RBP22.84■■□□□ 1.25
PITPNC1-201ENST00000299954 CSPP1Q1MSJ5 1256 aa22.84■■□□□ 1.25
PITPNC1-201ENST00000299954 RALBP1Q15311 655 aa22.84■■□□□ 1.25
PITPNC1-201ENST00000299954 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.83■■□□□ 1.24
PITPNC1-201ENST00000299954 KIF16BQ96L93 1317 aa22.82■■□□□ 1.24
PITPNC1-201ENST00000299954 HMMRO75330 724 aa22.81■■□□□ 1.24
PITPNC1-201ENST00000299954 CENPJQ9HC77 1338 aaPredicted RBP22.81■■□□□ 1.24
PITPNC1-201ENST00000299954 MARCH6O60337 910 aa22.81■■□□□ 1.24
PITPNC1-201ENST00000299954 RILPL2Q969X0 211 aa22.81■■□□□ 1.24
PITPNC1-201ENST00000299954 TMX4Q9H1E5 349 aaPredicted RBP22.8■■□□□ 1.24
PITPNC1-201ENST00000299954 CCDC34Q96HJ3 373 aa22.8■■□□□ 1.24
PITPNC1-201ENST00000299954 NUTM2FA1L443 756 aa22.8■■□□□ 1.24
PITPNC1-201ENST00000299954 G3V3G9 751 aa22.8■■□□□ 1.24
PITPNC1-201ENST00000299954 DCAF8Q5TAQ9 597 aa22.8■■□□□ 1.24
PITPNC1-201ENST00000299954 PLIN1O60240 522 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms