RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 DNMT1P26358 1616 aaKnown RBP31.43■■■□□ 2.62
SOX17-201ENST00000297316 ABCC5O15440 1437 aa31.42■■■□□ 2.62
SOX17-201ENST00000297316 KDM5BQ9UGL1 1544 aa31.41■■■□□ 2.62
SOX17-201ENST00000297316 MAPKBP1O60336 1514 aa31.39■■■□□ 2.62
SOX17-201ENST00000297316 KCNH8Q96L42 1107 aa31.37■■■□□ 2.61
SOX17-201ENST00000297316 TTC37Q6PGP7 1564 aa31.37■■■□□ 2.61
SOX17-201ENST00000297316 GCC2Q8IWJ2 1684 aa31.35■■■□□ 2.61
SOX17-201ENST00000297316 CDC42BPBQ9Y5S2 1711 aa31.35■■■□□ 2.61
SOX17-201ENST00000297316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.34■■■□□ 2.61
SOX17-201ENST00000297316 KDM6BO15054 1643 aa31.34■■■□□ 2.61
SOX17-201ENST00000297316 PREX2Q70Z35 1606 aa31.3■■■□□ 2.6
SOX17-201ENST00000297316 AKNAQ7Z591 1439 aa31.28■■■□□ 2.6
SOX17-201ENST00000297316 CROCC2H7BZ55 1655 aa31.26■■■□□ 2.59
SOX17-201ENST00000297316 ZNF316A6NFI3 1004 aaPredicted RBP31.25■■■□□ 2.59
SOX17-201ENST00000297316 SAMD9LQ8IVG5 1584 aa31.24■■■□□ 2.59
SOX17-201ENST00000297316 ROCK1Q13464 1354 aa31.23■■■□□ 2.59
SOX17-201ENST00000297316 MYO5CQ9NQX4 1742 aa31.21■■■□□ 2.59
SOX17-201ENST00000297316 HNRNPMP52272 730 aaKnown RBP eCLIP31.21■■■□□ 2.59
SOX17-201ENST00000297316 ARHGAP5Q13017 1502 aa31.19■■■□□ 2.58
SOX17-201ENST00000297316 ADGBQ8N7X0 1667 aa31.18■■■□□ 2.58
SOX17-201ENST00000297316 SIN3AQ96ST3 1273 aa31.18■■■□□ 2.58
SOX17-201ENST00000297316 DIEXFQ68CQ4 756 aaKnown RBP31.15■■■□□ 2.58
SOX17-201ENST00000297316 NCOA1Q15788 1441 aa31.15■■■□□ 2.58
SOX17-201ENST00000297316 MBD5Q9P267 1494 aa31.14■■■□□ 2.58
SOX17-201ENST00000297316 WDR7Q9Y4E6 1490 aa31.13■■■□□ 2.57
SOX17-201ENST00000297316 TRIM52Q96A61 297 aa31.13■■■□□ 2.57
SOX17-201ENST00000297316 NEUROD1Q13562 356 aa31.11■■■□□ 2.57
SOX17-201ENST00000297316 ADGRL2O95490 1459 aa31.11■■■□□ 2.57
SOX17-201ENST00000297316 SYCP2Q9BX26 1530 aa31.1■■■□□ 2.57
SOX17-201ENST00000297316 C9orf84Q5VXU9 1444 aa31.09■■■□□ 2.57
SOX17-201ENST00000297316 ARHGEF5Q12774 1597 aa31.09■■■□□ 2.57
SOX17-201ENST00000297316 ASXL2Q76L83 1435 aa31.08■■■□□ 2.57
SOX17-201ENST00000297316 PLCH2O75038 1416 aa31.08■■■□□ 2.57
SOX17-201ENST00000297316 DENND4BO75064 1496 aaPredicted RBP31.06■■■□□ 2.56
SOX17-201ENST00000297316 SHANK2Q9UPX8 1470 aa31.06■■■□□ 2.56
SOX17-201ENST00000297316 ANKRD30AQ9BXX3 1397 aa31.05■■■□□ 2.56
SOX17-201ENST00000297316 TSPY4P0CV99 314 aa31.04■■■□□ 2.56
SOX17-201ENST00000297316 TSPY10P0CW01 314 aa31.04■■■□□ 2.56
SOX17-201ENST00000297316 CCDC141Q6ZP82 1450 aa31.03■■■□□ 2.56
SOX17-201ENST00000297316 ARHGEF12Q9NZN5 1544 aa31.01■■■□□ 2.56
SOX17-201ENST00000297316 NPM1P06748 294 aaKnown RBP eCLIP31.01■■■□□ 2.55
SOX17-201ENST00000297316 EFCAB2Q5VUJ9 269 aa30.98■■■□□ 2.55
SOX17-201ENST00000297316 MPHOSPH9Q99550 1183 aa30.98■■■□□ 2.55
SOX17-201ENST00000297316 ABCA9Q8IUA7 1624 aa30.96■■■□□ 2.55
SOX17-201ENST00000297316 ANKRD50Q9ULJ7 1429 aa30.95■■■□□ 2.54
SOX17-201ENST00000297316 FOXD1Q16676 465 aa30.95■■■□□ 2.54
SOX17-201ENST00000297316 RIMBP3CA6NJZ7 1639 aa30.95■■■□□ 2.54
SOX17-201ENST00000297316 RIMBP3BA6NNM3 1639 aa30.95■■■□□ 2.54
SOX17-201ENST00000297316 RIMBP3Q9UFD9 1639 aa30.95■■■□□ 2.54
SOX17-201ENST00000297316 KIAA1107Q9UPP5 1409 aa30.94■■■□□ 2.54
SOX17-201ENST00000297316 CYB5RLQ6IPT4 315 aa30.94■■■□□ 2.54
SOX17-201ENST00000297316 PLEKHH2Q8IVE3 1493 aa30.93■■■□□ 2.54
SOX17-201ENST00000297316 KIF15Q9NS87 1388 aa30.92■■■□□ 2.54
SOX17-201ENST00000297316 RSPH4AQ5TD94 716 aa30.92■■■□□ 2.54
SOX17-201ENST00000297316 ABCC1P33527 1531 aa30.92■■■□□ 2.54
SOX17-201ENST00000297316 ARAP3Q8WWN8 1544 aa30.87■■■□□ 2.53
SOX17-201ENST00000297316 TRAPPC8Q9Y2L5 1435 aa30.87■■■□□ 2.53
SOX17-201ENST00000297316 MAST1Q9Y2H9 1570 aa30.86■■■□□ 2.53
SOX17-201ENST00000297316 PZPP20742 1482 aa30.86■■■□□ 2.53
SOX17-201ENST00000297316 SLC4A1APQ9BWU0 796 aaKnown RBP30.85■■■□□ 2.53
SOX17-201ENST00000297316 FANCAO15360 1455 aa30.85■■■□□ 2.53
SOX17-201ENST00000297316 AFAP1Q8N556 730 aa30.79■■■□□ 2.52
SOX17-201ENST00000297316 ACIN1Q9UKV3 1341 aaKnown RBP30.78■■■□□ 2.52
SOX17-201ENST00000297316 TIMELESSQ9UNS1 1208 aa30.78■■■□□ 2.52
SOX17-201ENST00000297316 TONSLQ96HA7 1378 aa30.77■■■□□ 2.52
SOX17-201ENST00000297316 PLXNC1O60486 1568 aa30.76■■■□□ 2.51
SOX17-201ENST00000297316 NUP155O75694 1391 aa30.74■■■□□ 2.51
SOX17-201ENST00000297316 ANKRD30BQ9BXX2 1392 aa30.73■■■□□ 2.51
SOX17-201ENST00000297316 PPP1R15AO75807 674 aaPredicted RBP30.73■■■□□ 2.51
SOX17-201ENST00000297316 ADGRL1O94910 1474 aa30.72■■■□□ 2.51
SOX17-201ENST00000297316 CD109Q6YHK3 1445 aa30.72■■■□□ 2.51
SOX17-201ENST00000297316 SCAPERQ9BY12 1400 aa30.7■■■□□ 2.51
SOX17-201ENST00000297316 PKD2Q13563 968 aa30.69■■■□□ 2.5
SOX17-201ENST00000297316 SPAG9O60271 1321 aaKnown RBP30.69■■■□□ 2.5
SOX17-201ENST00000297316 ZFYVE16Q7Z3T8 1539 aa30.66■■■□□ 2.5
SOX17-201ENST00000297316 KDM5DQ9BY66 1539 aa30.65■■■□□ 2.5
SOX17-201ENST00000297316 MIER1Q8N108 512 aa30.65■■■□□ 2.5
SOX17-201ENST00000297316 DUOX2Q9NRD8 1548 aa30.65■■■□□ 2.5
SOX17-201ENST00000297316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.61■■■□□ 2.49
SOX17-201ENST00000297316 RPRD2Q5VT52 1461 aaKnown RBP30.59■■■□□ 2.49
SOX17-201ENST00000297316 RTEL1-TNFRSF6BF6WH68 1400 aa30.59■■■□□ 2.49
SOX17-201ENST00000297316 UNC13BO14795 1591 aa30.59■■■□□ 2.49
SOX17-201ENST00000297316 INO80Q9ULG1 1556 aaPredicted RBP30.59■■■□□ 2.49
SOX17-201ENST00000297316 ATP7AQ04656 1500 aa30.58■■■□□ 2.49
SOX17-201ENST00000297316 FAM135AQ9P2D6 1515 aa30.58■■■□□ 2.49
SOX17-201ENST00000297316 ERBINQ96RT1 1412 aa30.56■■■□□ 2.48
SOX17-201ENST00000297316 MYT1LQ9UL68 1186 aa30.56■■■□□ 2.48
SOX17-201ENST00000297316 L3MBTL2Q969R5 705 aa30.55■■■□□ 2.48
SOX17-201ENST00000297316 CFAP74Q9C0B2 1584 aa30.53■■■□□ 2.48
SOX17-201ENST00000297316 MAP3K4Q9Y6R4 1608 aa30.51■■■□□ 2.47
SOX17-201ENST00000297316 KIDINS220Q9ULH0 1771 aa30.5■■■□□ 2.47
SOX17-201ENST00000297316 SCAF1Q9H7N4 1312 aaKnown RBP30.48■■■□□ 2.47
SOX17-201ENST00000297316 ZNF518AQ6AHZ1 1483 aa30.48■■■□□ 2.47
SOX17-201ENST00000297316 TEX14Q8IWB6 1497 aa30.48■■■□□ 2.47
SOX17-201ENST00000297316 IQGAP3Q86VI3 1631 aa30.48■■■□□ 2.47
SOX17-201ENST00000297316 MAGI2Q86UL8 1455 aa30.46■■■□□ 2.47
SOX17-201ENST00000297316 HIRIP3Q9BW71 556 aaPredicted RBP30.46■■■□□ 2.47
SOX17-201ENST00000297316 POGZQ7Z3K3 1410 aa30.46■■■□□ 2.47
SOX17-201ENST00000297316 FAM69CQ0P6D2 419 aa30.44■■■□□ 2.46
SOX17-201ENST00000297316 DIP2BQ9P265 1576 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms