RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 PMFBP1Q8TBY8 1022 aa15.6■□□□□ 0.09
SNRK-201ENST00000296088 CLIP1P30622 1438 aa15.59■□□□□ 0.09
SNRK-201ENST00000296088 NEUROD2Q15784 382 aa15.59■□□□□ 0.09
SNRK-201ENST00000296088 NOM1Q5C9Z4 860 aaKnown RBP15.59■□□□□ 0.09
SNRK-201ENST00000296088 VSIG10Q8N0Z9 540 aa15.57■□□□□ 0.08
SNRK-201ENST00000296088 NPHP1O15259 732 aa15.57■□□□□ 0.08
SNRK-201ENST00000296088 MTERF4Q7Z6M4 381 aaKnown RBP15.56■□□□□ 0.08
SNRK-201ENST00000296088 TMF1P82094 1093 aa15.56■□□□□ 0.08
SNRK-201ENST00000296088 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
SNRK-201ENST00000296088 CDR1P51861 262 aa15.55■□□□□ 0.08
SNRK-201ENST00000296088 TSR1Q2NL82 804 aaKnown RBP15.55■□□□□ 0.08
SNRK-201ENST00000296088 ATP6V1DQ9Y5K8 247 aa15.54■□□□□ 0.08
SNRK-201ENST00000296088 TPM1P09493 284 aa15.53■□□□□ 0.08
SNRK-201ENST00000296088 ZNF771Q7L3S4 317 aaPredicted RBP15.53■□□□□ 0.08
SNRK-201ENST00000296088 GPATCH3Q96I76 525 aa15.53■□□□□ 0.08
SNRK-201ENST00000296088 GZF1Q9H116 711 aaPredicted RBP15.53■□□□□ 0.08
SNRK-201ENST00000296088 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.53■□□□□ 0.08
SNRK-201ENST00000296088 TAOK2Q9UL54 1235 aa15.53■□□□□ 0.08
SNRK-201ENST00000296088 RRP12Q5JTH9 1297 aaKnown RBP15.53■□□□□ 0.08
SNRK-201ENST00000296088 MAP7D2Q96T17 732 aa15.53■□□□□ 0.08
SNRK-201ENST00000296088 ACBD3Q9H3P7 528 aa15.52■□□□□ 0.07
SNRK-201ENST00000296088 RRP7BPQ9NSQ0 103 aa15.52■□□□□ 0.07
SNRK-201ENST00000296088 ARID3AQ99856 593 aa15.51■□□□□ 0.07
SNRK-201ENST00000296088 ST18O60284 1047 aa15.51■□□□□ 0.07
SNRK-201ENST00000296088 HMMRO75330 724 aa15.51■□□□□ 0.07
SNRK-201ENST00000296088 SPRYD3Q8NCJ5 442 aa15.51■□□□□ 0.07
SNRK-201ENST00000296088 ZCCHC6Q5VYS8 1495 aaKnown RBP15.5■□□□□ 0.07
SNRK-201ENST00000296088 U2SURPO15042 1029 aaKnown RBP15.5■□□□□ 0.07
SNRK-201ENST00000296088 SLKQ9H2G2 1235 aaPredicted RBP15.5■□□□□ 0.07
SNRK-201ENST00000296088 POGKQ9P215 609 aa15.49■□□□□ 0.07
SNRK-201ENST00000296088 PLEKHD1A6NEE1 506 aa15.49■□□□□ 0.07
SNRK-201ENST00000296088 TPM2P07951 284 aa15.48■□□□□ 0.07
SNRK-201ENST00000296088 KIF16BQ96L93 1317 aa15.48■□□□□ 0.07
SNRK-201ENST00000296088 PRM3Q9NNZ6 103 aa15.48■□□□□ 0.07
SNRK-201ENST00000296088 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.48■□□□□ 0.07
SNRK-201ENST00000296088 RGL3Q3MIN7 710 aa15.47■□□□□ 0.07
SNRK-201ENST00000296088 RCAN3Q9UKA8 241 aa15.47■□□□□ 0.07
SNRK-201ENST00000296088 RTF1Q92541 710 aaKnown RBP15.47■□□□□ 0.07
SNRK-201ENST00000296088 GOLGA6L19H0YKK7 550 aa15.46■□□□□ 0.07
SNRK-201ENST00000296088 CEP162Q5TB80 1403 aa15.46■□□□□ 0.07
SNRK-201ENST00000296088 ARGLU1Q9NWB6 273 aaPredicted RBP15.46■□□□□ 0.07
SNRK-201ENST00000296088 PDE3BQ13370 1112 aa15.46■□□□□ 0.07
SNRK-201ENST00000296088 GSE1Q14687 1217 aa15.45■□□□□ 0.06
SNRK-201ENST00000296088 PLPPR3Q6T4P5 718 aa15.45■□□□□ 0.06
SNRK-201ENST00000296088 IPO7O95373 1038 aaKnown RBP15.44■□□□□ 0.06
SNRK-201ENST00000296088 RALBP1Q15311 655 aa15.44■□□□□ 0.06
SNRK-201ENST00000296088 NCBP3Q53F19 620 aaKnown RBP15.44■□□□□ 0.06
SNRK-201ENST00000296088 CWC15Q9P013 229 aaKnown RBP15.44■□□□□ 0.06
SNRK-201ENST00000296088 GOLGA3Q08378 1498 aa15.44■□□□□ 0.06
SNRK-201ENST00000296088 KTN1Q86UP2 1357 aaKnown RBP15.44■□□□□ 0.06
SNRK-201ENST00000296088 RASSF8Q8NHQ8 419 aa15.44■□□□□ 0.06
SNRK-201ENST00000296088 HDGFP51858 240 aaKnown RBP15.43■□□□□ 0.06
SNRK-201ENST00000296088 ISY1Q9ULR0 285 aaKnown RBP15.43■□□□□ 0.06
SNRK-201ENST00000296088 HSP90B1P14625 803 aaKnown RBP15.42■□□□□ 0.06
SNRK-201ENST00000296088 AK7Q96M32 723 aa15.42■□□□□ 0.06
SNRK-201ENST00000296088 CCDC66A2RUB6 948 aa15.42■□□□□ 0.06
SNRK-201ENST00000296088 SF3A1Q15459 793 aaKnown RBP15.42■□□□□ 0.06
SNRK-201ENST00000296088 BECN2A8MW95 431 aa15.42■□□□□ 0.06
SNRK-201ENST00000296088 MORC1Q86VD1 984 aa15.41■□□□□ 0.06
SNRK-201ENST00000296088 CC2D1BQ5T0F9 858 aaKnown RBP15.41■□□□□ 0.06
SNRK-201ENST00000296088 CCDC191Q8NCU4 936 aa15.41■□□□□ 0.06
SNRK-201ENST00000296088 DCTN1Q14203 1278 aa15.41■□□□□ 0.06
SNRK-201ENST00000296088 TPD52L1Q16890 204 aaPredicted RBP15.4■□□□□ 0.06
SNRK-201ENST00000296088 PHLDB1Q86UU1 1377 aa15.4■□□□□ 0.06
SNRK-201ENST00000296088 ANKRD20A12PQ8NF67 263 aa15.39■□□□□ 0.05
SNRK-201ENST00000296088 CFDP1Q9UEE9 299 aaPredicted RBP15.39■□□□□ 0.05
SNRK-201ENST00000296088 MFAP1P55081 439 aaKnown RBP15.38■□□□□ 0.05
SNRK-201ENST00000296088 APPP05067 770 aa15.38■□□□□ 0.05
SNRK-201ENST00000296088 DDX49Q9Y6V7 483 aaKnown RBP15.38■□□□□ 0.05
SNRK-201ENST00000296088 ITPRIPQ8IWB1 547 aa15.37■□□□□ 0.05
SNRK-201ENST00000296088 HSP90B2PQ58FF3 399 aa15.37■□□□□ 0.05
SNRK-201ENST00000296088 DIAPH3Q9NSV4 1193 aa15.37■□□□□ 0.05
SNRK-201ENST00000296088 ERCC4Q92889 916 aaPredicted RBP15.36■□□□□ 0.05
SNRK-201ENST00000296088 RUFY1Q96T51 708 aa15.36■□□□□ 0.05
SNRK-201ENST00000296088 CCDC47Q96A33 483 aaKnown RBP15.36■□□□□ 0.05
SNRK-201ENST00000296088 STK31Q9BXU1 1019 aa15.36■□□□□ 0.05
SNRK-201ENST00000296088 CCAR2Q8N163 923 aaKnown RBP15.35■□□□□ 0.05
SNRK-201ENST00000296088 HOOK1Q9UJC3 728 aaKnown RBP15.35■□□□□ 0.05
SNRK-201ENST00000296088 RDXP35241 583 aaKnown RBP15.34■□□□□ 0.05
SNRK-201ENST00000296088 GORABQ5T7V8 394 aa15.34■□□□□ 0.05
SNRK-201ENST00000296088 SENP3-EIF4A1A0A087X0R7 540 aa15.33■□□□□ 0.04
SNRK-201ENST00000296088 CHMP7Q8WUX9 453 aaPredicted RBP15.33■□□□□ 0.04
SNRK-201ENST00000296088 KANK1Q14678 1352 aa15.33■□□□□ 0.04
SNRK-201ENST00000296088 FAM43AQ8N2R8 423 aa15.32■□□□□ 0.04
SNRK-201ENST00000296088 LMOD3Q0VAK6 560 aa15.32■□□□□ 0.04
SNRK-201ENST00000296088 HDGFL2Q7Z4V5 671 aaPredicted RBP15.32■□□□□ 0.04
SNRK-201ENST00000296088 TMX4Q9H1E5 349 aaPredicted RBP15.32■□□□□ 0.04
SNRK-201ENST00000296088 SPAG9O60271 1321 aaKnown RBP15.31■□□□□ 0.04
SNRK-201ENST00000296088 H3BQV1 296 aa15.31■□□□□ 0.04
SNRK-201ENST00000296088 IFFO2Q5TF58 517 aa15.31■□□□□ 0.04
SNRK-201ENST00000296088 CPLX2Q6PUV4 134 aaKnown RBP15.31■□□□□ 0.04
SNRK-201ENST00000296088 TRIM6-TRIM34B2RNG4 842 aa15.31■□□□□ 0.04
SNRK-201ENST00000296088 CENPQQ7L2Z9 268 aaPredicted RBP15.31■□□□□ 0.04
SNRK-201ENST00000296088 LRRFIP1Q32MZ4 808 aaKnown RBP15.3■□□□□ 0.04
SNRK-201ENST00000296088 FAM161AQ3B820 660 aa15.3■□□□□ 0.04
SNRK-201ENST00000296088 FANCIQ9NVI1 1328 aa15.3■□□□□ 0.04
SNRK-201ENST00000296088 ABCC9O60706 1549 aa15.3■□□□□ 0.04
SNRK-201ENST00000296088 MARCH6O60337 910 aa15.3■□□□□ 0.04
SNRK-201ENST00000296088 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
SNRK-201ENST00000296088 PATL2C9JE40 543 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms