RNA–Protein interactions for RNA: ENST00000288050.8

PDPR-201, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPR, Length 9,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-201ENST00000288050 CALD1Q05682 793 aaKnown RBP12.46□□□□□ -0.41
PDPR-201ENST00000288050 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
PDPR-201ENST00000288050 PHF14O94880 888 aa12.45□□□□□ -0.42
PDPR-201ENST00000288050 EIF4G2P78344 907 aaKnown RBP eCLIP12.45□□□□□ -0.42
PDPR-201ENST00000288050 RASSF8Q8NHQ8 419 aa12.44□□□□□ -0.42
PDPR-201ENST00000288050 MS4A1P11836 297 aa12.44□□□□□ -0.42
PDPR-201ENST00000288050 TSR1Q2NL82 804 aaKnown RBP12.44□□□□□ -0.42
PDPR-201ENST00000288050 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.44□□□□□ -0.42
PDPR-201ENST00000288050 CREBRFQ8IUR6 639 aa12.44□□□□□ -0.42
PDPR-201ENST00000288050 RSPH6AQ9H0K4 717 aa12.44□□□□□ -0.42
PDPR-201ENST00000288050 KIAA1211Q6ZU35 1233 aa12.43□□□□□ -0.42
PDPR-201ENST00000288050 SPRYD3Q8NCJ5 442 aa12.43□□□□□ -0.42
PDPR-201ENST00000288050 CSPP1Q1MSJ5 1256 aa12.43□□□□□ -0.42
PDPR-201ENST00000288050 ANO8Q9HCE9 1232 aaPredicted RBP12.43□□□□□ -0.42
PDPR-201ENST00000288050 CCAR2Q8N163 923 aaKnown RBP12.42□□□□□ -0.42
PDPR-201ENST00000288050 MAPK8IP3Q9UPT6 1336 aa12.42□□□□□ -0.42
PDPR-201ENST00000288050 VSIG10Q8N0Z9 540 aa12.42□□□□□ -0.42
PDPR-201ENST00000288050 RGL3Q3MIN7 710 aa12.41□□□□□ -0.42
PDPR-201ENST00000288050 SENP3-EIF4A1A0A087X0R7 540 aa12.4□□□□□ -0.42
PDPR-201ENST00000288050 NEFHP12036 1026 aa12.4□□□□□ -0.42
PDPR-201ENST00000288050 RDXP35241 583 aaKnown RBP12.4□□□□□ -0.42
PDPR-201ENST00000288050 CDR1P51861 262 aa12.4□□□□□ -0.42
PDPR-201ENST00000288050 EIF4G1Q04637 1599 aaKnown RBP12.4□□□□□ -0.42
PDPR-201ENST00000288050 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.42
PDPR-201ENST00000288050 LMOD2Q6P5Q4 547 aa12.4□□□□□ -0.42
PDPR-201ENST00000288050 GZF1Q9H116 711 aaPredicted RBP12.4□□□□□ -0.42
PDPR-201ENST00000288050 DCTN1Q14203 1278 aa12.39□□□□□ -0.43
PDPR-201ENST00000288050 AK7Q96M32 723 aa12.39□□□□□ -0.43
PDPR-201ENST00000288050 TPM2P07951 284 aa12.38□□□□□ -0.43
PDPR-201ENST00000288050 TPM1P09493 284 aa12.38□□□□□ -0.43
PDPR-201ENST00000288050 CNKSR2Q8WXI2 1034 aa12.38□□□□□ -0.43
PDPR-201ENST00000288050 PES1O00541 588 aaKnown RBP12.37□□□□□ -0.43
PDPR-201ENST00000288050 RUFY1Q96T51 708 aa12.37□□□□□ -0.43
PDPR-201ENST00000288050 KNSTRNQ9Y448 316 aa12.36□□□□□ -0.43
PDPR-201ENST00000288050 FRAT1Q92837 279 aaPredicted RBP12.35□□□□□ -0.43
PDPR-201ENST00000288050 TMX4Q9H1E5 349 aaPredicted RBP12.35□□□□□ -0.43
PDPR-201ENST00000288050 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.35□□□□□ -0.431e-6■■■■■ 99
PDPR-201ENST00000288050 NEXNQ0ZGT2 675 aa12.35□□□□□ -0.43
PDPR-201ENST00000288050 TPD52L1Q16890 204 aaPredicted RBP12.35□□□□□ -0.43
PDPR-201ENST00000288050 VPS53Q5VIR6 699 aa12.34□□□□□ -0.43
PDPR-201ENST00000288050 CWC15Q9P013 229 aaKnown RBP12.34□□□□□ -0.43
PDPR-201ENST00000288050 PLEKHD1A6NEE1 506 aa12.34□□□□□ -0.43
PDPR-201ENST00000288050 PLCD4Q9BRC7 762 aa12.33□□□□□ -0.44
PDPR-201ENST00000288050 H0YHG0 523 aa12.33□□□□□ -0.44
PDPR-201ENST00000288050 MLECQ14165 292 aa12.33□□□□□ -0.44
PDPR-201ENST00000288050 NEUROD2Q15784 382 aa12.32□□□□□ -0.44
PDPR-201ENST00000288050 ZRSR2Q15696 482 aaKnown RBP12.32□□□□□ -0.44
PDPR-201ENST00000288050 PPP4R2Q9NY27 417 aa12.32□□□□□ -0.44
PDPR-201ENST00000288050 WWC1Q8IX03 1113 aa12.32□□□□□ -0.44
PDPR-201ENST00000288050 CLIP1P30622 1438 aa12.32□□□□□ -0.44
PDPR-201ENST00000288050 ACBD3Q9H3P7 528 aa12.32□□□□□ -0.44
PDPR-201ENST00000288050 NUDCQ9Y266 331 aa12.31□□□□□ -0.44
PDPR-201ENST00000288050 CDCA8Q53HL2 280 aa12.31□□□□□ -0.44
PDPR-201ENST00000288050 IPO7O95373 1038 aaKnown RBP12.31□□□□□ -0.44
PDPR-201ENST00000288050 DYDC1Q8WWB3 177 aa12.3□□□□□ -0.44
PDPR-201ENST00000288050 HSP90AB3PQ58FF7 597 aa12.29□□□□□ -0.44
PDPR-201ENST00000288050 NACADO15069 1562 aa12.28□□□□□ -0.44
PDPR-201ENST00000288050 TCEAL9Q9UHQ7 104 aa12.28□□□□□ -0.44
PDPR-201ENST00000288050 MARCH6O60337 910 aa12.28□□□□□ -0.44
PDPR-201ENST00000288050 GPATCH3Q96I76 525 aa12.28□□□□□ -0.44
PDPR-201ENST00000288050 INCENPQ9NQS7 918 aa12.28□□□□□ -0.44
PDPR-201ENST00000288050 SUPT16HQ9Y5B9 1047 aaKnown RBP12.27□□□□□ -0.44
PDPR-201ENST00000288050 HSP90B2PQ58FF3 399 aa12.27□□□□□ -0.45
PDPR-201ENST00000288050 GOLGA6L19H0YKK7 550 aa12.26□□□□□ -0.45
PDPR-201ENST00000288050 CFDP1Q9UEE9 299 aaPredicted RBP12.26□□□□□ -0.45
PDPR-201ENST00000288050 RSF1Q96T23 1441 aaPredicted RBP12.25□□□□□ -0.45
PDPR-201ENST00000288050 KIF3AQ9Y496 699 aa12.25□□□□□ -0.45
PDPR-201ENST00000288050 SEPT11Q9NVA2 429 aaKnown RBP12.25□□□□□ -0.45
PDPR-201ENST00000288050 ARGLU1Q9NWB6 273 aaPredicted RBP12.25□□□□□ -0.45
PDPR-201ENST00000288050 ZNF592Q92610 1267 aa12.24□□□□□ -0.45
PDPR-201ENST00000288050 POGKQ9P215 609 aa12.24□□□□□ -0.45
PDPR-201ENST00000288050 SOX12O15370 315 aa12.24□□□□□ -0.45
PDPR-201ENST00000288050 BCCIPQ9P287 314 aaKnown RBP eCLIP12.24□□□□□ -0.45
PDPR-201ENST00000288050 ODF2Q5BJF6 829 aa12.23□□□□□ -0.45
PDPR-201ENST00000288050 MYO6Q9UM54 1294 aa12.23□□□□□ -0.45
PDPR-201ENST00000288050 SLKQ9H2G2 1235 aaPredicted RBP12.23□□□□□ -0.45
PDPR-201ENST00000288050 KIF16BQ96L93 1317 aa12.23□□□□□ -0.45
PDPR-201ENST00000288050 ANKRD20A12PQ8NF67 263 aa12.22□□□□□ -0.45
PDPR-201ENST00000288050 CCDC66A2RUB6 948 aa12.22□□□□□ -0.45
PDPR-201ENST00000288050 CT47A1Q5JQC4 288 aaPredicted RBP12.22□□□□□ -0.45
PDPR-201ENST00000288050 GOLGA3Q08378 1498 aa12.22□□□□□ -0.45
PDPR-201ENST00000288050 G3V3G9 751 aa12.21□□□□□ -0.45
PDPR-201ENST00000288050 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
PDPR-201ENST00000288050 PCMTD1Q96MG8 357 aaPredicted RBP12.21□□□□□ -0.45
PDPR-201ENST00000288050 SF3A1Q15459 793 aaKnown RBP12.21□□□□□ -0.45
PDPR-201ENST00000288050 DDX11L8A8MPP1 907 aa12.2□□□□□ -0.46
PDPR-201ENST00000288050 U2SURPO15042 1029 aaKnown RBP12.2□□□□□ -0.46
PDPR-201ENST00000288050 GOLGA6L7A0A1B0GV03 622 aa12.2□□□□□ -0.46
PDPR-201ENST00000288050 BECN2A8MW95 431 aa12.2□□□□□ -0.46
PDPR-201ENST00000288050 CCDC173Q0VFZ6 552 aa12.19□□□□□ -0.46
PDPR-201ENST00000288050 HOMER1Q86YM7 354 aa12.19□□□□□ -0.46
PDPR-201ENST00000288050 GORABQ5T7V8 394 aa12.19□□□□□ -0.46
PDPR-201ENST00000288050 TCERG1O14776 1098 aaKnown RBP12.18□□□□□ -0.46
PDPR-201ENST00000288050 MIER1Q8N108 512 aa12.18□□□□□ -0.46
PDPR-201ENST00000288050 APBB1O00213 710 aa12.18□□□□□ -0.46
PDPR-201ENST00000288050 SAFB2Q14151 953 aaKnown RBP eCLIP12.18□□□□□ -0.46
PDPR-201ENST00000288050 CAGE1Q8TC20 777 aa12.17□□□□□ -0.46
PDPR-201ENST00000288050 FAM13BQ9NYF5 915 aa12.17□□□□□ -0.46
PDPR-201ENST00000288050 KIF27Q86VH2 1401 aa12.17□□□□□ -0.46
PDPR-201ENST00000288050 WRNQ14191 1432 aaPredicted RBP eCLIP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms