RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 MCCP23508 829 aa21.33■■□□□ 1.01
TSPAN3-201ENST00000267970 HSP90B1P14625 803 aaKnown RBP21.33■■□□□ 1
TSPAN3-201ENST00000267970 SRPK2P78362 688 aaKnown RBP21.33■■□□□ 1
TSPAN3-201ENST00000267970 ITPRIPQ8IWB1 547 aa21.33■■□□□ 1
TSPAN3-201ENST00000267970 STK26Q9P289 416 aa21.33■■□□□ 1
TSPAN3-201ENST00000267970 MLECQ14165 292 aa21.32■■□□□ 1
TSPAN3-201ENST00000267970 NOC3LQ8WTT2 800 aaKnown RBP21.32■■□□□ 1
TSPAN3-201ENST00000267970 SLC4A3P48751 1232 aa21.31■■□□□ 1
TSPAN3-201ENST00000267970 TSHZ2Q9NRE2 1034 aa21.31■■□□□ 1
TSPAN3-201ENST00000267970 MORC1Q86VD1 984 aa21.3■■□□□ 1
TSPAN3-201ENST00000267970 HSPA5P11021 654 aaKnown RBP21.29■■□□□ 1
TSPAN3-201ENST00000267970 KIAA2012Q0VF49 1180 aa21.27■□□□□ 0.99
TSPAN3-201ENST00000267970 FOXD4L6Q3SYB3 417 aaPredicted RBP21.27■□□□□ 0.99
TSPAN3-201ENST00000267970 FOXD4L3Q6VB84 417 aaPredicted RBP21.27■□□□□ 0.99
TSPAN3-201ENST00000267970 TMF1P82094 1093 aa21.25■□□□□ 0.99
TSPAN3-201ENST00000267970 CLUAP1Q96AJ1 413 aa21.25■□□□□ 0.99
TSPAN3-201ENST00000267970 CCDC146Q8IYE0 955 aa21.25■□□□□ 0.99
TSPAN3-201ENST00000267970 CCDC180Q9P1Z9 1646 aa21.24■□□□□ 0.99
TSPAN3-201ENST00000267970 RSF1Q96T23 1441 aaPredicted RBP21.23■□□□□ 0.99
TSPAN3-201ENST00000267970 GOLGA6L3A6NEY3 463 aa21.23■□□□□ 0.99
TSPAN3-201ENST00000267970 MS4A1P11836 297 aa21.23■□□□□ 0.99
TSPAN3-201ENST00000267970 KIAA1211Q6ZU35 1233 aa21.23■□□□□ 0.99
TSPAN3-201ENST00000267970 GBP4Q96PP9 640 aa21.23■□□□□ 0.99
TSPAN3-201ENST00000267970 RCAN3Q9UKA8 241 aa21.23■□□□□ 0.99
TSPAN3-201ENST00000267970 VSIG10Q8N0Z9 540 aa21.22■□□□□ 0.99
TSPAN3-201ENST00000267970 PRM3Q9NNZ6 103 aa21.21■□□□□ 0.99
TSPAN3-201ENST00000267970 GOLGA3Q08378 1498 aa21.21■□□□□ 0.99
TSPAN3-201ENST00000267970 TRIM6-TRIM34B2RNG4 842 aa21.2■□□□□ 0.98
TSPAN3-201ENST00000267970 CHMP4BQ9H444 224 aaKnown RBP21.2■□□□□ 0.98
TSPAN3-201ENST00000267970 RTF1Q92541 710 aaKnown RBP21.19■□□□□ 0.98
TSPAN3-201ENST00000267970 CCDC9Q9Y3X0 531 aaKnown RBP21.19■□□□□ 0.98
TSPAN3-201ENST00000267970 CHMP3Q9Y3E7 222 aa21.19■□□□□ 0.98
TSPAN3-201ENST00000267970 PAK3O75914 559 aaPredicted RBP21.18■□□□□ 0.98
TSPAN3-201ENST00000267970 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.17■□□□□ 0.98
TSPAN3-201ENST00000267970 BCL11BQ9C0K0 894 aaPredicted RBP21.16■□□□□ 0.98
TSPAN3-201ENST00000267970 A0A0U1RQG5 324 aaPredicted RBP21.16■□□□□ 0.98
TSPAN3-201ENST00000267970 U2AF1L5P0DN76 240 aaPredicted RBP21.16■□□□□ 0.98
TSPAN3-201ENST00000267970 U2AF1Q01081 240 aaKnown RBP eCLIP21.16■□□□□ 0.98
TSPAN3-201ENST00000267970 PATL2C9JE40 543 aaKnown RBP21.15■□□□□ 0.98
TSPAN3-201ENST00000267970 FBXO3Q9UK99 471 aa21.14■□□□□ 0.97
TSPAN3-201ENST00000267970 BAZ1BQ9UIG0 1483 aaKnown RBP21.14■□□□□ 0.97
TSPAN3-201ENST00000267970 TIMELESSQ9UNS1 1208 aa21.14■□□□□ 0.97
TSPAN3-201ENST00000267970 SLC4A10Q6U841 1118 aa21.14■□□□□ 0.97
TSPAN3-201ENST00000267970 IPO9Q96P70 1041 aaKnown RBP21.12■□□□□ 0.97
TSPAN3-201ENST00000267970 HSP90AA2PQ14568 343 aaPredicted RBP21.12■□□□□ 0.97
TSPAN3-201ENST00000267970 NUTM2DQ5VT03 806 aaPredicted RBP21.11■□□□□ 0.97
TSPAN3-201ENST00000267970 WWC1Q8IX03 1113 aa21.08■□□□□ 0.97
TSPAN3-201ENST00000267970 RWDD1Q9H446 243 aaPredicted RBP21.08■□□□□ 0.97
TSPAN3-201ENST00000267970 PLIN1O60240 522 aa21.08■□□□□ 0.97
TSPAN3-201ENST00000267970 CALD1Q05682 793 aaKnown RBP21.08■□□□□ 0.96
TSPAN3-201ENST00000267970 SMC4Q9NTJ3 1288 aa21.07■□□□□ 0.96
TSPAN3-201ENST00000267970 KTN1Q86UP2 1357 aaKnown RBP21.06■□□□□ 0.96
TSPAN3-201ENST00000267970 CCAR2Q8N163 923 aaKnown RBP21.06■□□□□ 0.96
TSPAN3-201ENST00000267970 RRP7AQ9Y3A4 280 aaKnown RBP21.06■□□□□ 0.96
TSPAN3-201ENST00000267970 GOLGA6L1Q8N7Z2 621 aa21.05■□□□□ 0.96
TSPAN3-201ENST00000267970 RASSF8Q8NHQ8 419 aa21.05■□□□□ 0.96
TSPAN3-201ENST00000267970 PES1O00541 588 aaKnown RBP21.04■□□□□ 0.96
TSPAN3-201ENST00000267970 TCERG1O14776 1098 aaKnown RBP21.04■□□□□ 0.96
TSPAN3-201ENST00000267970 GORABQ5T7V8 394 aa21.04■□□□□ 0.96
TSPAN3-201ENST00000267970 CCER2I3L3R5 266 aa21.03■□□□□ 0.96
TSPAN3-201ENST00000267970 BCL2L13Q9BXK5 485 aa21.03■□□□□ 0.96
TSPAN3-201ENST00000267970 PTMSP20962 102 aa21.03■□□□□ 0.96
TSPAN3-201ENST00000267970 GGT6Q6P531 493 aa21.03■□□□□ 0.96
TSPAN3-201ENST00000267970 IPO8O15397 1037 aaKnown RBP21.03■□□□□ 0.96
TSPAN3-201ENST00000267970 SYAP1Q96A49 352 aaPredicted RBP21.02■□□□□ 0.95
TSPAN3-201ENST00000267970 CSB-PGBD3P0DP91 1061 aa21.01■□□□□ 0.95
TSPAN3-201ENST00000267970 TOMM22Q9NS69 142 aa21.01■□□□□ 0.95
TSPAN3-201ENST00000267970 PKD2Q13563 968 aa21■□□□□ 0.95
TSPAN3-201ENST00000267970 NUTM2FA1L443 756 aa21■□□□□ 0.95
TSPAN3-201ENST00000267970 TPM4P67936 248 aa20.99■□□□□ 0.95
TSPAN3-201ENST00000267970 ZNF592Q92610 1267 aa20.99■□□□□ 0.95
TSPAN3-201ENST00000267970 CCNB3Q8WWL7 1395 aa20.99■□□□□ 0.95
TSPAN3-201ENST00000267970 EIF4G1Q04637 1599 aaKnown RBP20.98■□□□□ 0.95
TSPAN3-201ENST00000267970 LTV1Q96GA3 475 aaPredicted RBP20.98■□□□□ 0.95
TSPAN3-201ENST00000267970 ELL2O00472 640 aaPredicted RBP20.97■□□□□ 0.95
TSPAN3-201ENST00000267970 ROCK2O75116 1388 aaKnown RBP20.97■□□□□ 0.95
TSPAN3-201ENST00000267970 VPS53Q5VIR6 699 aa20.97■□□□□ 0.95
TSPAN3-201ENST00000267970 TAF7LQ5H9L4 462 aa20.96■□□□□ 0.95
TSPAN3-201ENST00000267970 FBXW7Q969H0 707 aa20.95■□□□□ 0.94
TSPAN3-201ENST00000267970 RILPL2Q969X0 211 aa20.95■□□□□ 0.94
TSPAN3-201ENST00000267970 PMFBP1Q8TBY8 1022 aa20.95■□□□□ 0.94
TSPAN3-201ENST00000267970 ZNF771Q7L3S4 317 aaPredicted RBP20.94■□□□□ 0.94
TSPAN3-201ENST00000267970 KANK4Q5T7N3 995 aaPredicted RBP20.93■□□□□ 0.94
TSPAN3-201ENST00000267970 HDGFL2Q7Z4V5 671 aaPredicted RBP20.93■□□□□ 0.94
TSPAN3-201ENST00000267970 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.92■□□□□ 0.94
TSPAN3-201ENST00000267970 HTATSF1O43719 755 aaKnown RBP20.91■□□□□ 0.94
TSPAN3-201ENST00000267970 TNIKQ9UKE5 1360 aa20.9■□□□□ 0.94
TSPAN3-201ENST00000267970 SF3A1Q15459 793 aaKnown RBP20.9■□□□□ 0.94
TSPAN3-201ENST00000267970 DDX49Q9Y6V7 483 aaKnown RBP20.89■□□□□ 0.94
TSPAN3-201ENST00000267970 WRNQ14191 1432 aaPredicted RBP eCLIP20.89■□□□□ 0.94
TSPAN3-201ENST00000267970 TRHP20396 242 aaPredicted RBP20.88■□□□□ 0.93
TSPAN3-201ENST00000267970 STK31Q9BXU1 1019 aa20.88■□□□□ 0.93
TSPAN3-201ENST00000267970 EXOC6Q8TAG9 804 aa20.87■□□□□ 0.93
TSPAN3-201ENST00000267970 SETQ01105 290 aaPredicted RBP20.87■□□□□ 0.93
TSPAN3-201ENST00000267970 FOSBP53539 338 aa20.87■□□□□ 0.93
TSPAN3-201ENST00000267970 FAM13BQ9NYF5 915 aa20.87■□□□□ 0.93
TSPAN3-201ENST00000267970 ANKRD45Q5TZF3 282 aa20.86■□□□□ 0.93
TSPAN3-201ENST00000267970 CENPJQ9HC77 1338 aaPredicted RBP20.86■□□□□ 0.93
TSPAN3-201ENST00000267970 SETD5Q9C0A6 1442 aa20.86■□□□□ 0.93
TSPAN3-201ENST00000267970 CFAP44Q96MT7 982 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms