RNA–Protein interactions for RNA: ENST00000264741.9

ITGA9-201, Transcript of integrin subunit alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA9, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-201ENST00000264741 FRAT2O75474 233 aaPredicted RBP20.91■□□□□ 0.94
ITGA9-201ENST00000264741 PES1O00541 588 aaKnown RBP20.9■□□□□ 0.94
ITGA9-201ENST00000264741 RAD21O60216 631 aa20.9■□□□□ 0.94
ITGA9-201ENST00000264741 CWC22Q9HCG8 908 aaKnown RBP20.9■□□□□ 0.94
ITGA9-201ENST00000264741 CC2D1BQ5T0F9 858 aaKnown RBP20.89■□□□□ 0.94
ITGA9-201ENST00000264741 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
ITGA9-201ENST00000264741 KIAA1211Q6ZU35 1233 aa20.87■□□□□ 0.93
ITGA9-201ENST00000264741 HSCBQ8IWL3 235 aa20.87■□□□□ 0.93
ITGA9-201ENST00000264741 TCEAL9Q9UHQ7 104 aa20.86■□□□□ 0.93
ITGA9-201ENST00000264741 MTUS2Q5JR59 1369 aa20.86■□□□□ 0.93
ITGA9-201ENST00000264741 CALRP27797 417 aaKnown RBP20.84■□□□□ 0.93
ITGA9-201ENST00000264741 GTF2E1P29083 439 aaPredicted RBP20.84■□□□□ 0.93
ITGA9-201ENST00000264741 SRPK2P78362 688 aaKnown RBP20.84■□□□□ 0.93
ITGA9-201ENST00000264741 DCAF8L1A6NGE4 600 aa20.82■□□□□ 0.92
ITGA9-201ENST00000264741 TPM4P67936 248 aa20.81■□□□□ 0.92
ITGA9-201ENST00000264741 CDCA8Q53HL2 280 aa20.81■□□□□ 0.92
ITGA9-201ENST00000264741 CTDP1Q9Y5B0 961 aaPredicted RBP20.81■□□□□ 0.92
ITGA9-201ENST00000264741 TOMM22Q9NS69 142 aa20.8■□□□□ 0.92
ITGA9-201ENST00000264741 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.78■□□□□ 0.92
ITGA9-201ENST00000264741 CHMP4BQ9H444 224 aaKnown RBP20.78■□□□□ 0.92
ITGA9-201ENST00000264741 STK26Q9P289 416 aa20.77■□□□□ 0.92
ITGA9-201ENST00000264741 CSRNP3Q8WYN3 585 aa20.77■□□□□ 0.92
ITGA9-201ENST00000264741 MEX3CQ5U5Q3 659 aaKnown RBP20.75■□□□□ 0.91
ITGA9-201ENST00000264741 FBXW7Q969H0 707 aa20.75■□□□□ 0.91
ITGA9-201ENST00000264741 TRIM34Q9BYJ4 488 aa20.74■□□□□ 0.91
ITGA9-201ENST00000264741 SETQ01105 290 aaPredicted RBP20.74■□□□□ 0.91
ITGA9-201ENST00000264741 SAMD1Q6SPF0 538 aaPredicted RBP20.74■□□□□ 0.91
ITGA9-201ENST00000264741 PLEKHD1A6NEE1 506 aa20.73■□□□□ 0.91
ITGA9-201ENST00000264741 CARD11Q9BXL7 1154 aa20.73■□□□□ 0.91
ITGA9-201ENST00000264741 GZF1Q9H116 711 aaPredicted RBP20.72■□□□□ 0.91
ITGA9-201ENST00000264741 TPD52L1Q16890 204 aaPredicted RBP20.71■□□□□ 0.91
ITGA9-201ENST00000264741 SUPT16HQ9Y5B9 1047 aaKnown RBP20.68■□□□□ 0.9
ITGA9-201ENST00000264741 TPM3P06753 285 aa20.68■□□□□ 0.9
ITGA9-201ENST00000264741 HDGFP51858 240 aaKnown RBP20.68■□□□□ 0.9
ITGA9-201ENST00000264741 RRP12Q5JTH9 1297 aaKnown RBP20.68■□□□□ 0.9
ITGA9-201ENST00000264741 VSIG10Q8N0Z9 540 aa20.68■□□□□ 0.9
ITGA9-201ENST00000264741 CCAR2Q8N163 923 aaKnown RBP20.67■□□□□ 0.9
ITGA9-201ENST00000264741 B4GALNT3Q6L9W6 998 aa20.67■□□□□ 0.9
ITGA9-201ENST00000264741 TRIM6-TRIM34B2RNG4 842 aa20.66■□□□□ 0.9
ITGA9-201ENST00000264741 MS4A1P11836 297 aa20.65■□□□□ 0.9
ITGA9-201ENST00000264741 CCDC34Q96HJ3 373 aa20.65■□□□□ 0.9
ITGA9-201ENST00000264741 NOL8Q76FK4 1167 aaKnown RBP20.63■□□□□ 0.89
ITGA9-201ENST00000264741 PTMSP20962 102 aa20.62■□□□□ 0.89
ITGA9-201ENST00000264741 GPATCH3Q96I76 525 aa20.62■□□□□ 0.89
ITGA9-201ENST00000264741 HTATSF1O43719 755 aaKnown RBP20.62■□□□□ 0.89
ITGA9-201ENST00000264741 TSR1Q2NL82 804 aaKnown RBP20.61■□□□□ 0.89
ITGA9-201ENST00000264741 PAF1Q8N7H5 531 aa20.61■□□□□ 0.89
ITGA9-201ENST00000264741 USP35Q9P2H5 1018 aa20.6■□□□□ 0.89
ITGA9-201ENST00000264741 EVA1CP58658 441 aa20.58■□□□□ 0.89
ITGA9-201ENST00000264741 LTV1Q96GA3 475 aaPredicted RBP20.57■□□□□ 0.88
ITGA9-201ENST00000264741 PCMTD1Q96MG8 357 aaPredicted RBP20.56■□□□□ 0.88
ITGA9-201ENST00000264741 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.56■□□□□ 0.88
ITGA9-201ENST00000264741 MORC1Q86VD1 984 aa20.55■□□□□ 0.88
ITGA9-201ENST00000264741 NOP58Q9Y2X3 529 aaKnown RBP20.54■□□□□ 0.88
ITGA9-201ENST00000264741 FOXD4L5Q5VV16 416 aaPredicted RBP20.54■□□□□ 0.88
ITGA9-201ENST00000264741 FOXD4L4Q8WXT5 416 aaPredicted RBP20.54■□□□□ 0.88
ITGA9-201ENST00000264741 SF3A1Q15459 793 aaKnown RBP20.53■□□□□ 0.88
ITGA9-201ENST00000264741 SLC4A10Q6U841 1118 aa20.53■□□□□ 0.88
ITGA9-201ENST00000264741 CFDP1Q9UEE9 299 aaPredicted RBP20.53■□□□□ 0.88
ITGA9-201ENST00000264741 TPM2P07951 284 aa20.52■□□□□ 0.88
ITGA9-201ENST00000264741 ODF2Q5BJF6 829 aa20.51■□□□□ 0.87
ITGA9-201ENST00000264741 NOL10Q9BSC4 688 aaKnown RBP20.51■□□□□ 0.87
ITGA9-201ENST00000264741 CCDC43Q96MW1 224 aaKnown RBP20.5■□□□□ 0.87
ITGA9-201ENST00000264741 PPP1R1BQ9UD71 204 aaPredicted RBP20.5■□□□□ 0.87
ITGA9-201ENST00000264741 FOXD4L1Q9NU39 408 aa20.5■□□□□ 0.87
ITGA9-201ENST00000264741 DHX16O60231 1041 aaKnown RBP20.5■□□□□ 0.87
ITGA9-201ENST00000264741 SYAP1Q96A49 352 aaPredicted RBP20.49■□□□□ 0.87
ITGA9-201ENST00000264741 ITPRIPQ8IWB1 547 aa20.49■□□□□ 0.87
ITGA9-201ENST00000264741 AKAP17AQ02040 695 aaKnown RBP20.49■□□□□ 0.87
ITGA9-201ENST00000264741 SYTL4Q96C24 671 aaPredicted RBP20.49■□□□□ 0.87
ITGA9-201ENST00000264741 MIER1Q8N108 512 aa20.48■□□□□ 0.87
ITGA9-201ENST00000264741 AK7Q96M32 723 aa20.48■□□□□ 0.87
ITGA9-201ENST00000264741 NUTM2FA1L443 756 aa20.48■□□□□ 0.87
ITGA9-201ENST00000264741 GGT6Q6P531 493 aa20.47■□□□□ 0.87
ITGA9-201ENST00000264741 PPM1FP49593 454 aaPredicted RBP20.47■□□□□ 0.87
ITGA9-201ENST00000264741 ZFYVE27Q5T4F4 411 aa20.47■□□□□ 0.87
ITGA9-201ENST00000264741 NGEFQ8N5V2 710 aa20.47■□□□□ 0.87
ITGA9-201ENST00000264741 HDGFL2Q7Z4V5 671 aaPredicted RBP20.47■□□□□ 0.87
ITGA9-201ENST00000264741 ERCC6Q03468 1493 aa20.47■□□□□ 0.87
ITGA9-201ENST00000264741 SPAG9O60271 1321 aaKnown RBP20.46■□□□□ 0.87
ITGA9-201ENST00000264741 KANK1Q14678 1352 aa20.46■□□□□ 0.87
ITGA9-201ENST00000264741 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.46■□□□□ 0.87
ITGA9-201ENST00000264741 AMOTL1Q8IY63 956 aa20.45■□□□□ 0.86
ITGA9-201ENST00000264741 CCDC70Q6NSX1 233 aa20.45■□□□□ 0.86
ITGA9-201ENST00000264741 GBP4Q96PP9 640 aa20.45■□□□□ 0.86
ITGA9-201ENST00000264741 CT47A1Q5JQC4 288 aaPredicted RBP20.43■□□□□ 0.86
ITGA9-201ENST00000264741 CCAR1Q8IX12 1150 aaKnown RBP20.43■□□□□ 0.86
ITGA9-201ENST00000264741 H3BQV1 296 aa20.43■□□□□ 0.86
ITGA9-201ENST00000264741 IFFO2Q5TF58 517 aa20.43■□□□□ 0.86
ITGA9-201ENST00000264741 STK31Q9BXU1 1019 aa20.43■□□□□ 0.86
ITGA9-201ENST00000264741 VPS37DQ86XT2 251 aa20.42■□□□□ 0.86
ITGA9-201ENST00000264741 FOXD4L6Q3SYB3 417 aaPredicted RBP20.42■□□□□ 0.86
ITGA9-201ENST00000264741 FOXD4L3Q6VB84 417 aaPredicted RBP20.42■□□□□ 0.86
ITGA9-201ENST00000264741 CFAP44Q96MT7 982 aa20.41■□□□□ 0.86
ITGA9-201ENST00000264741 SCRIBQ14160 1630 aa20.41■□□□□ 0.86
ITGA9-201ENST00000264741 TMEM132AQ24JP5 1023 aa20.41■□□□□ 0.86
ITGA9-201ENST00000264741 R3HCC1Q9Y3T6 440 aaKnown RBP20.41■□□□□ 0.86
ITGA9-201ENST00000264741 WDR70Q9NW82 654 aa20.4■□□□□ 0.86
ITGA9-201ENST00000264741 TMF1P82094 1093 aa20.4■□□□□ 0.86
ITGA9-201ENST00000264741 CCDC97Q96F63 343 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms