RNA–Protein interactions for RNA: ENST00000264639.8

PSMD3-201, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD3, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-201ENST00000264639 DAPK1P53355 1430 aa27.14■■□□□ 1.93
PSMD3-201ENST00000264639 ITSN2Q9NZM3 1697 aa27.13■■□□□ 1.93
PSMD3-201ENST00000264639 SHROOM2Q13796 1616 aa27.13■■□□□ 1.93
PSMD3-201ENST00000264639 ZNF644Q9H582 1327 aaPredicted RBP27.13■■□□□ 1.93
PSMD3-201ENST00000264639 DNMT1P26358 1616 aaKnown RBP27.12■■□□□ 1.93
PSMD3-201ENST00000264639 TIMELESSQ9UNS1 1208 aa27.12■■□□□ 1.93
PSMD3-201ENST00000264639 GPATCH8Q9UKJ3 1502 aaKnown RBP27.11■■□□□ 1.93
PSMD3-201ENST00000264639 PLEKHD1A6NEE1 506 aa27.11■■□□□ 1.93
PSMD3-201ENST00000264639 ABCC5O15440 1437 aa27.1■■□□□ 1.93
PSMD3-201ENST00000264639 CFDP1Q9UEE9 299 aaPredicted RBP27.09■■□□□ 1.93
PSMD3-201ENST00000264639 ROCK1Q13464 1354 aa27.08■■□□□ 1.92
PSMD3-201ENST00000264639 CAMSAP2Q08AD1 1489 aa27.06■■□□□ 1.92
PSMD3-201ENST00000264639 KDM6BO15054 1643 aa27.04■■□□□ 1.92
PSMD3-201ENST00000264639 SUPT16HQ9Y5B9 1047 aaKnown RBP27.03■■□□□ 1.92
PSMD3-201ENST00000264639 CLASP1Q7Z460 1538 aa27.01■■□□□ 1.92
PSMD3-201ENST00000264639 ABCC10Q5T3U5 1492 aa27■■□□□ 1.91
PSMD3-201ENST00000264639 TRIM52Q96A61 297 aa26.98■■□□□ 1.91
PSMD3-201ENST00000264639 ZNF777Q9ULD5 760 aaPredicted RBP26.98■■□□□ 1.91
PSMD3-201ENST00000264639 CDC42BPAQ5VT25 1732 aa26.98■■□□□ 1.91
PSMD3-201ENST00000264639 ERCC6L2Q5T890 1561 aa26.97■■□□□ 1.91
PSMD3-201ENST00000264639 TONSLQ96HA7 1378 aa26.95■■□□□ 1.9
PSMD3-201ENST00000264639 PPP1R15AO75807 674 aaPredicted RBP26.94■■□□□ 1.9
PSMD3-201ENST00000264639 DENND4BO75064 1496 aaPredicted RBP26.93■■□□□ 1.9
PSMD3-201ENST00000264639 CROCC2H7BZ55 1655 aa26.9■■□□□ 1.9
PSMD3-201ENST00000264639 RIMBP3CA6NJZ7 1639 aa26.9■■□□□ 1.9
PSMD3-201ENST00000264639 RIMBP3BA6NNM3 1639 aa26.9■■□□□ 1.9
PSMD3-201ENST00000264639 RIMBP3Q9UFD9 1639 aa26.9■■□□□ 1.9
PSMD3-201ENST00000264639 MPHOSPH9Q99550 1183 aa26.9■■□□□ 1.9
PSMD3-201ENST00000264639 ADGBQ8N7X0 1667 aa26.89■■□□□ 1.9
PSMD3-201ENST00000264639 ABCC2Q92887 1545 aa26.89■■□□□ 1.89
PSMD3-201ENST00000264639 NCOA1Q15788 1441 aa26.89■■□□□ 1.89
PSMD3-201ENST00000264639 ADGRL2O95490 1459 aa26.87■■□□□ 1.89
PSMD3-201ENST00000264639 ANKRD30AQ9BXX3 1397 aa26.81■■□□□ 1.88
PSMD3-201ENST00000264639 TSHZ2Q9NRE2 1034 aa26.8■■□□□ 1.88
PSMD3-201ENST00000264639 SHANK2Q9UPX8 1470 aa26.8■■□□□ 1.88
PSMD3-201ENST00000264639 PREX2Q70Z35 1606 aa26.79■■□□□ 1.88
PSMD3-201ENST00000264639 C9orf84Q5VXU9 1444 aa26.77■■□□□ 1.88
PSMD3-201ENST00000264639 CDC42BPBQ9Y5S2 1711 aa26.76■■□□□ 1.88
PSMD3-201ENST00000264639 KDM5BQ9UGL1 1544 aa26.76■■□□□ 1.87
PSMD3-201ENST00000264639 FOXD1Q16676 465 aa26.75■■□□□ 1.87
PSMD3-201ENST00000264639 SLC4A1APQ9BWU0 796 aaKnown RBP26.74■■□□□ 1.87
PSMD3-201ENST00000264639 ARHGEF5Q12774 1597 aa26.74■■□□□ 1.87
PSMD3-201ENST00000264639 TTC37Q6PGP7 1564 aa26.74■■□□□ 1.87
PSMD3-201ENST00000264639 UHRF1BP1LA0JNW5 1464 aa26.73■■□□□ 1.87
PSMD3-201ENST00000264639 SAMD9LQ8IVG5 1584 aa26.73■■□□□ 1.87
PSMD3-201ENST00000264639 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.73■■□□□ 1.877e-9■□□□□ 10.1
PSMD3-201ENST00000264639 TSPY4P0CV99 314 aa26.73■■□□□ 1.87
PSMD3-201ENST00000264639 TSPY10P0CW01 314 aa26.73■■□□□ 1.87
PSMD3-201ENST00000264639 MBD5Q9P267 1494 aa26.72■■□□□ 1.87
PSMD3-201ENST00000264639 ANKRD50Q9ULJ7 1429 aa26.72■■□□□ 1.87
PSMD3-201ENST00000264639 HNRNPMP52272 730 aaKnown RBP eCLIP26.71■■□□□ 1.87
PSMD3-201ENST00000264639 ANKRD30BQ9BXX2 1392 aa26.71■■□□□ 1.87
PSMD3-201ENST00000264639 PZPP20742 1482 aa26.7■■□□□ 1.86
PSMD3-201ENST00000264639 ZCCHC11Q5TAX3 1644 aaKnown RBP26.7■■□□□ 1.86
PSMD3-201ENST00000264639 ANP32EQ9BTT0 268 aa26.68■■□□□ 1.86
PSMD3-201ENST00000264639 CCDC141Q6ZP82 1450 aa26.67■■□□□ 1.86
PSMD3-201ENST00000264639 ARHGAP5Q13017 1502 aa26.67■■□□□ 1.86
PSMD3-201ENST00000264639 RPRD2Q5VT52 1461 aaKnown RBP26.65■■□□□ 1.86
PSMD3-201ENST00000264639 RSPH4AQ5TD94 716 aa26.64■■□□□ 1.86
PSMD3-201ENST00000264639 MYO5CQ9NQX4 1742 aa26.64■■□□□ 1.86
PSMD3-201ENST00000264639 CYB5RLQ6IPT4 315 aa26.64■■□□□ 1.85
PSMD3-201ENST00000264639 KCNH8Q96L42 1107 aa26.64■■□□□ 1.85
PSMD3-201ENST00000264639 HIRIP3Q9BW71 556 aaPredicted RBP26.63■■□□□ 1.85
PSMD3-201ENST00000264639 KIF15Q9NS87 1388 aa26.62■■□□□ 1.85
PSMD3-201ENST00000264639 SYCP2Q9BX26 1530 aa26.61■■□□□ 1.85
PSMD3-201ENST00000264639 L3MBTL2Q969R5 705 aa26.6■■□□□ 1.85
PSMD3-201ENST00000264639 KIAA1107Q9UPP5 1409 aa26.58■■□□□ 1.85
PSMD3-201ENST00000264639 PLEKHH2Q8IVE3 1493 aa26.56■■□□□ 1.84
PSMD3-201ENST00000264639 DDX10Q13206 875 aaKnown RBP26.56■■□□□ 1.84
PSMD3-201ENST00000264639 NUP155O75694 1391 aa26.55■■□□□ 1.84
PSMD3-201ENST00000264639 TEX14Q8IWB6 1497 aa26.55■■□□□ 1.84
PSMD3-201ENST00000264639 PLCH2O75038 1416 aa26.54■■□□□ 1.84
PSMD3-201ENST00000264639 PKD2Q13563 968 aa26.54■■□□□ 1.84
PSMD3-201ENST00000264639 KDM5DQ9BY66 1539 aa26.52■■□□□ 1.84
PSMD3-201ENST00000264639 MAST1Q9Y2H9 1570 aa26.52■■□□□ 1.84
PSMD3-201ENST00000264639 EFCAB2Q5VUJ9 269 aa26.47■■□□□ 1.83
PSMD3-201ENST00000264639 ARHGEF12Q9NZN5 1544 aa26.46■■□□□ 1.83
PSMD3-201ENST00000264639 WDR7Q9Y4E6 1490 aa26.44■■□□□ 1.82
PSMD3-201ENST00000264639 PLXNC1O60486 1568 aa26.43■■□□□ 1.82
PSMD3-201ENST00000264639 ABCC1P33527 1531 aa26.42■■□□□ 1.82
PSMD3-201ENST00000264639 HSPA5P11021 654 aaKnown RBP26.41■■□□□ 1.82
PSMD3-201ENST00000264639 EIF4G2P78344 907 aaKnown RBP eCLIP26.4■■□□□ 1.82
PSMD3-201ENST00000264639 NBPF8Q3BBV2 869 aa26.4■■□□□ 1.82
PSMD3-201ENST00000264639 ARAP3Q8WWN8 1544 aa26.4■■□□□ 1.82
PSMD3-201ENST00000264639 FAM135AQ9P2D6 1515 aa26.38■■□□□ 1.81
PSMD3-201ENST00000264639 UNC13BO14795 1591 aa26.35■■□□□ 1.81
PSMD3-201ENST00000264639 DUOX2Q9NRD8 1548 aa26.34■■□□□ 1.81
PSMD3-201ENST00000264639 TRAPPC8Q9Y2L5 1435 aa26.34■■□□□ 1.81
PSMD3-201ENST00000264639 FKBP8Q14318 412 aa26.32■■□□□ 1.8
PSMD3-201ENST00000264639 ABCA9Q8IUA7 1624 aa26.31■■□□□ 1.8
PSMD3-201ENST00000264639 ASXL2Q76L83 1435 aa26.3■■□□□ 1.8
PSMD3-201ENST00000264639 ERBINQ96RT1 1412 aa26.3■■□□□ 1.8
PSMD3-201ENST00000264639 WASHC2AQ641Q2 1341 aa26.29■■□□□ 1.8
PSMD3-201ENST00000264639 ANP32CO43423 234 aa26.28■■□□□ 1.8
PSMD3-201ENST00000264639 FANCAO15360 1455 aa26.27■■□□□ 1.8
PSMD3-201ENST00000264639 BCANQ96GW7 911 aa26.27■■□□□ 1.8
PSMD3-201ENST00000264639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.26■■□□□ 1.794e-7■■□□□ 12.8
PSMD3-201ENST00000264639 IQGAP3Q86VI3 1631 aa26.25■■□□□ 1.79
PSMD3-201ENST00000264639 CCER2I3L3R5 266 aa26.25■■□□□ 1.79
PSMD3-201ENST00000264639 SPAG9O60271 1321 aaKnown RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms