RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 ABCC10Q5T3U5 1492 aa35■■■■□ 3.19
TSPAN13-201ENST00000262067 CAMSAP2Q08AD1 1489 aa34.99■■■■□ 3.19
TSPAN13-201ENST00000262067 ROCK1Q13464 1354 aa34.95■■■■□ 3.19
TSPAN13-201ENST00000262067 NEUROD1Q13562 356 aa34.94■■■■□ 3.18
TSPAN13-201ENST00000262067 ZNF777Q9ULD5 760 aaPredicted RBP34.94■■■■□ 3.18
TSPAN13-201ENST00000262067 ABCC2Q92887 1545 aa34.92■■■■□ 3.18
TSPAN13-201ENST00000262067 KDM6BO15054 1643 aa34.91■■■■□ 3.18
TSPAN13-201ENST00000262067 CDC42BPAQ5VT25 1732 aa34.9■■■■□ 3.18
TSPAN13-201ENST00000262067 TRIM52Q96A61 297 aa34.82■■■■□ 3.16
TSPAN13-201ENST00000262067 TIMELESSQ9UNS1 1208 aa34.82■■■■□ 3.16
TSPAN13-201ENST00000262067 UHRF1BP1LA0JNW5 1464 aa34.76■■■■□ 3.16
TSPAN13-201ENST00000262067 NCOA1Q15788 1441 aa34.74■■■■□ 3.15
TSPAN13-201ENST00000262067 DENND4BO75064 1496 aaPredicted RBP34.73■■■■□ 3.15
TSPAN13-201ENST00000262067 CROCC2H7BZ55 1655 aa34.73■■■■□ 3.15
TSPAN13-201ENST00000262067 ADGRL2O95490 1459 aa34.71■■■■□ 3.15
TSPAN13-201ENST00000262067 MPHOSPH9Q99550 1183 aa34.7■■■■□ 3.15
TSPAN13-201ENST00000262067 ADGBQ8N7X0 1667 aa34.7■■■■□ 3.14
TSPAN13-201ENST00000262067 ACIN1Q9UKV3 1341 aaKnown RBP34.69■■■■□ 3.14
TSPAN13-201ENST00000262067 KDM5BQ9UGL1 1544 aa34.68■■■■□ 3.14
TSPAN13-201ENST00000262067 ZCCHC11Q5TAX3 1644 aaKnown RBP34.67■■■■□ 3.14
TSPAN13-201ENST00000262067 PREX2Q70Z35 1606 aa34.67■■■■□ 3.14
TSPAN13-201ENST00000262067 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.67■■■■□ 3.14
TSPAN13-201ENST00000262067 CDC42BPBQ9Y5S2 1711 aa34.66■■■■□ 3.14
TSPAN13-201ENST00000262067 TTC37Q6PGP7 1564 aa34.66■■■■□ 3.14
TSPAN13-201ENST00000262067 PPP1R15AO75807 674 aaPredicted RBP34.65■■■■□ 3.14
TSPAN13-201ENST00000262067 ANKRD30AQ9BXX3 1397 aa34.65■■■■□ 3.14
TSPAN13-201ENST00000262067 HNRNPMP52272 730 aaKnown RBP eCLIP34.64■■■■□ 3.14
TSPAN13-201ENST00000262067 KCNH8Q96L42 1107 aa34.63■■■■□ 3.13
TSPAN13-201ENST00000262067 TONSLQ96HA7 1378 aa34.63■■■■□ 3.13
TSPAN13-201ENST00000262067 SHANK2Q9UPX8 1470 aa34.62■■■■□ 3.13
TSPAN13-201ENST00000262067 SAMD9LQ8IVG5 1584 aa34.61■■■■□ 3.13
TSPAN13-201ENST00000262067 MBD5Q9P267 1494 aa34.61■■■■□ 3.13
TSPAN13-201ENST00000262067 C9orf84Q5VXU9 1444 aa34.6■■■■□ 3.13
TSPAN13-201ENST00000262067 OSCARQ8IYS5 282 aa34.6■■■■□ 3.13
TSPAN13-201ENST00000262067 ARHGEF5Q12774 1597 aa34.59■■■■□ 3.13
TSPAN13-201ENST00000262067 TSPY4P0CV99 314 aa34.58■■■■□ 3.13
TSPAN13-201ENST00000262067 TSPY10P0CW01 314 aa34.58■■■■□ 3.13
TSPAN13-201ENST00000262067 ARHGAP5Q13017 1502 aa34.55■■■■□ 3.12
TSPAN13-201ENST00000262067 FOXD1Q16676 465 aa34.53■■■■□ 3.12
TSPAN13-201ENST00000262067 ANKRD50Q9ULJ7 1429 aa34.51■■■■□ 3.11
TSPAN13-201ENST00000262067 SLC4A1APQ9BWU0 796 aaKnown RBP34.5■■■■□ 3.11
TSPAN13-201ENST00000262067 CCDC141Q6ZP82 1450 aa34.5■■■■□ 3.11
TSPAN13-201ENST00000262067 RSPH4AQ5TD94 716 aa34.5■■■■□ 3.11
TSPAN13-201ENST00000262067 MYO5CQ9NQX4 1742 aa34.49■■■■□ 3.11
TSPAN13-201ENST00000262067 PZPP20742 1482 aa34.47■■■■□ 3.11
TSPAN13-201ENST00000262067 SYCP2Q9BX26 1530 aa34.45■■■■□ 3.11
TSPAN13-201ENST00000262067 ANKRD30BQ9BXX2 1392 aa34.45■■■■□ 3.11
TSPAN13-201ENST00000262067 PLCH2O75038 1416 aa34.44■■■■□ 3.1
TSPAN13-201ENST00000262067 MIER1Q8N108 512 aa34.44■■■■□ 3.1
TSPAN13-201ENST00000262067 KIF15Q9NS87 1388 aa34.41■■■■□ 3.1
TSPAN13-201ENST00000262067 KIAA1107Q9UPP5 1409 aa34.4■■■■□ 3.1
TSPAN13-201ENST00000262067 PLEKHH2Q8IVE3 1493 aa34.39■■■■□ 3.1
TSPAN13-201ENST00000262067 EFCAB2Q5VUJ9 269 aa34.36■■■■□ 3.09
TSPAN13-201ENST00000262067 WDR7Q9Y4E6 1490 aa34.35■■■■□ 3.09
TSPAN13-201ENST00000262067 ARHGEF12Q9NZN5 1544 aa34.33■■■■□ 3.09
TSPAN13-201ENST00000262067 MAST1Q9Y2H9 1570 aa34.32■■■■□ 3.08
TSPAN13-201ENST00000262067 RPRD2Q5VT52 1461 aaKnown RBP34.31■■■■□ 3.08
TSPAN13-201ENST00000262067 NUP155O75694 1391 aa34.3■■■■□ 3.08
TSPAN13-201ENST00000262067 PKD2Q13563 968 aa34.28■■■■□ 3.08
TSPAN13-201ENST00000262067 L3MBTL2Q969R5 705 aa34.27■■■■□ 3.08
TSPAN13-201ENST00000262067 KDM5DQ9BY66 1539 aa34.23■■■■□ 3.07
TSPAN13-201ENST00000262067 ASXL2Q76L83 1435 aa34.23■■■■□ 3.07
TSPAN13-201ENST00000262067 ABCC1P33527 1531 aa34.23■■■■□ 3.07
TSPAN13-201ENST00000262067 ARAP3Q8WWN8 1544 aa34.23■■■■□ 3.07
TSPAN13-201ENST00000262067 HIRIP3Q9BW71 556 aaPredicted RBP34.23■■■■□ 3.07
TSPAN13-201ENST00000262067 TRAPPC8Q9Y2L5 1435 aa34.18■■■■□ 3.06
TSPAN13-201ENST00000262067 PLXNC1O60486 1568 aa34.18■■■■□ 3.06
TSPAN13-201ENST00000262067 TEX14Q8IWB6 1497 aa34.16■■■■□ 3.06
TSPAN13-201ENST00000262067 ABCA9Q8IUA7 1624 aa34.16■■■■□ 3.06
TSPAN13-201ENST00000262067 NPM1P06748 294 aaKnown RBP eCLIP34.16■■■■□ 3.06
TSPAN13-201ENST00000262067 FANCAO15360 1455 aa34.09■■■■□ 3.05
TSPAN13-201ENST00000262067 DUOX2Q9NRD8 1548 aa34.08■■■■□ 3.05
TSPAN13-201ENST00000262067 AFAP1Q8N556 730 aa34.07■■■■□ 3.04
TSPAN13-201ENST00000262067 FAM135AQ9P2D6 1515 aa34.07■■■■□ 3.04
TSPAN13-201ENST00000262067 DDX10Q13206 875 aaKnown RBP34.06■■■■□ 3.04
TSPAN13-201ENST00000262067 NBPF8Q3BBV2 869 aa34.05■■■■□ 3.04
TSPAN13-201ENST00000262067 SPAG9O60271 1321 aaKnown RBP34.04■■■■□ 3.04
TSPAN13-201ENST00000262067 UNC13BO14795 1591 aa34.04■■■■□ 3.04
TSPAN13-201ENST00000262067 ERBINQ96RT1 1412 aa34.01■■■■□ 3.03
TSPAN13-201ENST00000262067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34■■■■□ 3.03
TSPAN13-201ENST00000262067 RTEL1-TNFRSF6BF6WH68 1400 aa34■■■■□ 3.03
TSPAN13-201ENST00000262067 HSPA5P11021 654 aaKnown RBP33.97■■■■□ 3.03
TSPAN13-201ENST00000262067 YTHDC1Q96MU7 727 aaKnown RBP33.97■■■■□ 3.03
TSPAN13-201ENST00000262067 ADGRL1O94910 1474 aa33.96■■■■□ 3.03
TSPAN13-201ENST00000262067 ZFYVE16Q7Z3T8 1539 aa33.95■■■■□ 3.03
TSPAN13-201ENST00000262067 CENPBP07199 599 aaPredicted RBP33.95■■■■□ 3.03
TSPAN13-201ENST00000262067 SCAPERQ9BY12 1400 aa33.95■■■■□ 3.03
TSPAN13-201ENST00000262067 EIF4G2P78344 907 aaKnown RBP eCLIP33.94■■■■□ 3.02
TSPAN13-201ENST00000262067 IQGAP3Q86VI3 1631 aa33.91■■■■□ 3.02
TSPAN13-201ENST00000262067 MAGI2Q86UL8 1455 aa33.91■■■■□ 3.02
TSPAN13-201ENST00000262067 CD109Q6YHK3 1445 aa33.86■■■■□ 3.01
TSPAN13-201ENST00000262067 ATP7AQ04656 1500 aa33.85■■■■□ 3.01
TSPAN13-201ENST00000262067 INO80Q9ULG1 1556 aaPredicted RBP33.85■■■■□ 3.01
TSPAN13-201ENST00000262067 PLA2R1Q13018 1463 aa33.82■■■■□ 3
TSPAN13-201ENST00000262067 CYB5RLQ6IPT4 315 aa33.8■■■■□ 3
TSPAN13-201ENST00000262067 MYT1LQ9UL68 1186 aa33.8■■■■□ 3
TSPAN13-201ENST00000262067 ZNF326Q5BKZ1 582 aaKnown RBP33.79■■■■□ 3
TSPAN13-201ENST00000262067 CCDC144AA2RUR9 1427 aa33.78■■■■□ 3
TSPAN13-201ENST00000262067 UHRF1BP1Q6BDS2 1440 aa33.77■■■■□ 3
TSPAN13-201ENST00000262067 WASHC2AQ641Q2 1341 aa33.76■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms