RNA–Protein interactions for RNA: ENST00000238831.8

YIPF4-201, Transcript of Yip1 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF4, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-201ENST00000238831 HSP90B1P14625 803 aaKnown RBP11.03□□□□□ -0.64
YIPF4-201ENST00000238831 WWC1Q8IX03 1113 aa11.03□□□□□ -0.64
YIPF4-201ENST00000238831 GORABQ5T7V8 394 aa11.03□□□□□ -0.64
YIPF4-201ENST00000238831 TAF7LQ5H9L4 462 aa11.03□□□□□ -0.64
YIPF4-201ENST00000238831 CFDP1Q9UEE9 299 aaPredicted RBP11.02□□□□□ -0.64
YIPF4-201ENST00000238831 RASSF8Q8NHQ8 419 aa11.02□□□□□ -0.65
YIPF4-201ENST00000238831 STK26Q9P289 416 aa11.01□□□□□ -0.65
YIPF4-201ENST00000238831 HDGFP51858 240 aaKnown RBP10.99□□□□□ -0.65
YIPF4-201ENST00000238831 CEP89Q96ST8 783 aa10.99□□□□□ -0.65
YIPF4-201ENST00000238831 RSF1Q96T23 1441 aaPredicted RBP10.98□□□□□ -0.65
YIPF4-201ENST00000238831 CNKSR2Q8WXI2 1034 aa10.98□□□□□ -0.65
YIPF4-201ENST00000238831 MARCH6O60337 910 aa10.97□□□□□ -0.65
YIPF4-201ENST00000238831 B4GALNT3Q6L9W6 998 aa10.97□□□□□ -0.65
YIPF4-201ENST00000238831 FRAT2O75474 233 aaPredicted RBP10.97□□□□□ -0.65
YIPF4-201ENST00000238831 ZCCHC6Q5VYS8 1495 aaKnown RBP10.97□□□□□ -0.65
YIPF4-201ENST00000238831 MORC1Q86VD1 984 aa10.97□□□□□ -0.65
YIPF4-201ENST00000238831 NOP58Q9Y2X3 529 aaKnown RBP10.97□□□□□ -0.65
YIPF4-201ENST00000238831 TPM4P67936 248 aa10.96□□□□□ -0.66
YIPF4-201ENST00000238831 GOLGA6L1Q8N7Z2 621 aa10.95□□□□□ -0.66
YIPF4-201ENST00000238831 KANK1Q14678 1352 aa10.94□□□□□ -0.66
YIPF4-201ENST00000238831 ERCC6Q03468 1493 aa10.94□□□□□ -0.66
YIPF4-201ENST00000238831 GTF2E1P29083 439 aaPredicted RBP10.94□□□□□ -0.66
YIPF4-201ENST00000238831 TOMM22Q9NS69 142 aa10.94□□□□□ -0.66
YIPF4-201ENST00000238831 MSH5O43196 834 aa10.93□□□□□ -0.66
YIPF4-201ENST00000238831 PES1O00541 588 aaKnown RBP10.93□□□□□ -0.66
YIPF4-201ENST00000238831 GZF1Q9H116 711 aaPredicted RBP10.93□□□□□ -0.66
YIPF4-201ENST00000238831 TMF1P82094 1093 aa10.93□□□□□ -0.66
YIPF4-201ENST00000238831 GPATCH3Q96I76 525 aa10.93□□□□□ -0.66
YIPF4-201ENST00000238831 TRIM6-TRIM34B2RNG4 842 aa10.93□□□□□ -0.66
YIPF4-201ENST00000238831 TNNT3P45378 269 aaPredicted RBP10.93□□□□□ -0.66
YIPF4-201ENST00000238831 HTATSF1O43719 755 aaKnown RBP10.92□□□□□ -0.66
YIPF4-201ENST00000238831 DCAF11Q8TEB1 546 aa10.92□□□□□ -0.66
YIPF4-201ENST00000238831 PPP4R2Q9NY27 417 aa10.91□□□□□ -0.66
YIPF4-201ENST00000238831 RAD21O60216 631 aa10.91□□□□□ -0.66
YIPF4-201ENST00000238831 TCEAL9Q9UHQ7 104 aa10.91□□□□□ -0.66
YIPF4-201ENST00000238831 HDGFL2Q7Z4V5 671 aaPredicted RBP10.91□□□□□ -0.66
YIPF4-201ENST00000238831 CCDC34Q96HJ3 373 aa10.9□□□□□ -0.66
YIPF4-201ENST00000238831 CLIP1P30622 1438 aa10.9□□□□□ -0.66
YIPF4-201ENST00000238831 NOL8Q76FK4 1167 aaKnown RBP10.9□□□□□ -0.66
YIPF4-201ENST00000238831 ITPRIPQ8IWB1 547 aa10.9□□□□□ -0.66
YIPF4-201ENST00000238831 CFAP44Q96MT7 982 aa10.9□□□□□ -0.66
YIPF4-201ENST00000238831 PATL2C9JE40 543 aaKnown RBP10.89□□□□□ -0.67
YIPF4-201ENST00000238831 GGT6Q6P531 493 aa10.89□□□□□ -0.67
YIPF4-201ENST00000238831 IPO8O15397 1037 aaKnown RBP10.88□□□□□ -0.67
YIPF4-201ENST00000238831 CTDP1Q9Y5B0 961 aaPredicted RBP10.88□□□□□ -0.67
YIPF4-201ENST00000238831 GBP4Q96PP9 640 aa10.87□□□□□ -0.67
YIPF4-201ENST00000238831 TPD52L1Q16890 204 aaPredicted RBP10.87□□□□□ -0.67
YIPF4-201ENST00000238831 SLC4A10Q6U841 1118 aa10.87□□□□□ -0.67
YIPF4-201ENST00000238831 TPM3P06753 285 aa10.87□□□□□ -0.67
YIPF4-201ENST00000238831 KLHL34Q8N239 644 aa10.87□□□□□ -0.67
YIPF4-201ENST00000238831 SPAG9O60271 1321 aaKnown RBP10.87□□□□□ -0.67
YIPF4-201ENST00000238831 CCDC180Q9P1Z9 1646 aa10.87□□□□□ -0.67
YIPF4-201ENST00000238831 LTV1Q96GA3 475 aaPredicted RBP10.87□□□□□ -0.67
YIPF4-201ENST00000238831 TRIM34Q9BYJ4 488 aa10.87□□□□□ -0.67
YIPF4-201ENST00000238831 CWC22Q9HCG8 908 aaKnown RBP10.86□□□□□ -0.67
YIPF4-201ENST00000238831 SYAP1Q96A49 352 aaPredicted RBP10.86□□□□□ -0.67
YIPF4-201ENST00000238831 STK31Q9BXU1 1019 aa10.86□□□□□ -0.67
YIPF4-201ENST00000238831 EIF4G1Q04637 1599 aaKnown RBP10.85□□□□□ -0.67
YIPF4-201ENST00000238831 U2AF1L5P0DN76 240 aaPredicted RBP10.85□□□□□ -0.67
YIPF4-201ENST00000238831 U2AF1Q01081 240 aaKnown RBP eCLIP10.85□□□□□ -0.67
YIPF4-201ENST00000238831 FOXD4L1Q9NU39 408 aa10.85□□□□□ -0.67
YIPF4-201ENST00000238831 FBXW7Q969H0 707 aa10.84□□□□□ -0.67
YIPF4-201ENST00000238831 FOXD4L5Q5VV16 416 aaPredicted RBP10.84□□□□□ -0.67
YIPF4-201ENST00000238831 FOXD4L4Q8WXT5 416 aaPredicted RBP10.84□□□□□ -0.67
YIPF4-201ENST00000238831 SLKQ9H2G2 1235 aaPredicted RBP10.84□□□□□ -0.67
YIPF4-201ENST00000238831 SF3A1Q15459 793 aaKnown RBP10.84□□□□□ -0.67
YIPF4-201ENST00000238831 CALD1Q05682 793 aaKnown RBP10.83□□□□□ -0.68
YIPF4-201ENST00000238831 SIN3AQ96ST3 1273 aa10.83□□□□□ -0.68
YIPF4-201ENST00000238831 PHF23Q9BUL5 403 aaPredicted RBP10.83□□□□□ -0.68
YIPF4-201ENST00000238831 MEX3CQ5U5Q3 659 aaKnown RBP10.82□□□□□ -0.68
YIPF4-201ENST00000238831 TSR1Q2NL82 804 aaKnown RBP10.82□□□□□ -0.68
YIPF4-201ENST00000238831 MFAP1P55081 439 aaKnown RBP10.82□□□□□ -0.68
YIPF4-201ENST00000238831 CCAR2Q8N163 923 aaKnown RBP10.82□□□□□ -0.68
YIPF4-201ENST00000238831 PTMSP20962 102 aa10.82□□□□□ -0.68
YIPF4-201ENST00000238831 EVA1CP58658 441 aa10.82□□□□□ -0.68
YIPF4-201ENST00000238831 NUTM2FA1L443 756 aa10.81□□□□□ -0.68
YIPF4-201ENST00000238831 SAMD1Q6SPF0 538 aaPredicted RBP10.81□□□□□ -0.68
YIPF4-201ENST00000238831 CSPP1Q1MSJ5 1256 aa10.81□□□□□ -0.68
YIPF4-201ENST00000238831 NGDNQ8NEJ9 315 aaKnown RBP10.81□□□□□ -0.68
YIPF4-201ENST00000238831 USP35Q9P2H5 1018 aa10.8□□□□□ -0.68
YIPF4-201ENST00000238831 AKAP17AQ02040 695 aaKnown RBP10.8□□□□□ -0.68
YIPF4-201ENST00000238831 CCNB3Q8WWL7 1395 aa10.8□□□□□ -0.68
YIPF4-201ENST00000238831 H3BQV1 296 aa10.79□□□□□ -0.68
YIPF4-201ENST00000238831 IFFO2Q5TF58 517 aa10.79□□□□□ -0.68
YIPF4-201ENST00000238831 AMPHP49418 695 aa10.79□□□□□ -0.68
YIPF4-201ENST00000238831 KIF16BQ96L93 1317 aa10.79□□□□□ -0.68
YIPF4-201ENST00000238831 AEBP2Q6ZN18 517 aaPredicted RBP10.79□□□□□ -0.68
YIPF4-201ENST00000238831 TPM2P07951 284 aa10.79□□□□□ -0.68
YIPF4-201ENST00000238831 NOL10Q9BSC4 688 aaKnown RBP10.79□□□□□ -0.68
YIPF4-201ENST00000238831 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.79□□□□□ -0.68
YIPF4-201ENST00000238831 SETQ01105 290 aaPredicted RBP10.79□□□□□ -0.68
YIPF4-201ENST00000238831 PCMTD1Q96MG8 357 aaPredicted RBP10.78□□□□□ -0.68
YIPF4-201ENST00000238831 DCAF1Q9Y4B6 1507 aa10.78□□□□□ -0.68
YIPF4-201ENST00000238831 RWDD1Q9H446 243 aaPredicted RBP10.78□□□□□ -0.68
YIPF4-201ENST00000238831 DEKP35659 375 aaKnown RBP10.78□□□□□ -0.68
YIPF4-201ENST00000238831 NUTM2DQ5VT03 806 aaPredicted RBP10.78□□□□□ -0.68
YIPF4-201ENST00000238831 NGEFQ8N5V2 710 aa10.78□□□□□ -0.68
YIPF4-201ENST00000238831 SMC4Q9NTJ3 1288 aa10.78□□□□□ -0.68
YIPF4-201ENST00000238831 HMMRO75330 724 aa10.77□□□□□ -0.69
YIPF4-201ENST00000238831 EID1Q9Y6B2 187 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms