RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 RGL3Q3MIN7 710 aa9.51□□□□□ -0.89
PRDM2-201ENST00000235372 HIRIP3Q9BW71 556 aaPredicted RBP9.51□□□□□ -0.89
PRDM2-201ENST00000235372 ZNF330Q9Y3S2 320 aaPredicted RBP9.51□□□□□ -0.89
PRDM2-201ENST00000235372 SYAP1Q96A49 352 aaPredicted RBP9.51□□□□□ -0.89
PRDM2-201ENST00000235372 TAF7LQ5H9L4 462 aa9.51□□□□□ -0.89
PRDM2-201ENST00000235372 CCDC9Q9Y3X0 531 aaKnown RBP9.5□□□□□ -0.89
PRDM2-201ENST00000235372 GPATCH3Q96I76 525 aa9.5□□□□□ -0.89
PRDM2-201ENST00000235372 SCRIBQ14160 1630 aa9.5□□□□□ -0.89
PRDM2-201ENST00000235372 WWC1Q8IX03 1113 aa9.5□□□□□ -0.89
PRDM2-201ENST00000235372 RRP12Q5JTH9 1297 aaKnown RBP9.49□□□□□ -0.89
PRDM2-201ENST00000235372 CSRNP3Q8WYN3 585 aa9.49□□□□□ -0.89
PRDM2-201ENST00000235372 TSR1Q2NL82 804 aaKnown RBP9.48□□□□□ -0.89
PRDM2-201ENST00000235372 CTDP1Q9Y5B0 961 aaPredicted RBP9.48□□□□□ -0.89
PRDM2-201ENST00000235372 TRHP20396 242 aaPredicted RBP9.48□□□□□ -0.89
PRDM2-201ENST00000235372 CSPP1Q1MSJ5 1256 aa9.48□□□□□ -0.89
PRDM2-201ENST00000235372 TPM2P07951 284 aa9.48□□□□□ -0.89
PRDM2-201ENST00000235372 CSB-PGBD3P0DP91 1061 aa9.47□□□□□ -0.89
PRDM2-201ENST00000235372 SOX12O15370 315 aa9.47□□□□□ -0.89
PRDM2-201ENST00000235372 CHMP3Q9Y3E7 222 aa9.47□□□□□ -0.89
PRDM2-201ENST00000235372 CCDC70Q6NSX1 233 aa9.46□□□□□ -0.89
PRDM2-201ENST00000235372 CWC22Q9HCG8 908 aaKnown RBP9.46□□□□□ -0.89
PRDM2-201ENST00000235372 TPD52L1Q16890 204 aaPredicted RBP9.46□□□□□ -0.9
PRDM2-201ENST00000235372 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.46□□□□□ -0.9
PRDM2-201ENST00000235372 GBP4Q96PP9 640 aa9.46□□□□□ -0.9
PRDM2-201ENST00000235372 PES1O00541 588 aaKnown RBP9.46□□□□□ -0.9
PRDM2-201ENST00000235372 FRAT2O75474 233 aaPredicted RBP9.46□□□□□ -0.9
PRDM2-201ENST00000235372 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.45□□□□□ -0.97e-6■■■■■ 74.5
PRDM2-201ENST00000235372 DCAF8L1A6NGE4 600 aa9.45□□□□□ -0.9
PRDM2-201ENST00000235372 CHMP4AQ9BY43 222 aa9.45□□□□□ -0.9
PRDM2-201ENST00000235372 TRIM34Q9BYJ4 488 aa9.45□□□□□ -0.9
PRDM2-201ENST00000235372 PLEKHD1A6NEE1 506 aa9.44□□□□□ -0.9
PRDM2-201ENST00000235372 NOP58Q9Y2X3 529 aaKnown RBP9.43□□□□□ -0.9
PRDM2-201ENST00000235372 PAK3O75914 559 aaPredicted RBP9.43□□□□□ -0.9
PRDM2-201ENST00000235372 CARD11Q9BXL7 1154 aa9.43□□□□□ -0.9
PRDM2-201ENST00000235372 GTF2E1P29083 439 aaPredicted RBP9.42□□□□□ -0.9
PRDM2-201ENST00000235372 RRP7BPQ9NSQ0 103 aa9.42□□□□□ -0.9
PRDM2-201ENST00000235372 HDAC5Q9UQL6 1122 aa9.42□□□□□ -0.9
PRDM2-201ENST00000235372 TPM1P09493 284 aa9.42□□□□□ -0.9
PRDM2-201ENST00000235372 APBB1O00213 710 aa9.41□□□□□ -0.9
PRDM2-201ENST00000235372 SRPK2P78362 688 aaKnown RBP9.41□□□□□ -0.9
PRDM2-201ENST00000235372 IPO8O15397 1037 aaKnown RBP9.41□□□□□ -0.9
PRDM2-201ENST00000235372 CALD1Q05682 793 aaKnown RBP9.41□□□□□ -0.9
PRDM2-201ENST00000235372 TOMM22Q9NS69 142 aa9.41□□□□□ -0.9
PRDM2-201ENST00000235372 GPS2Q13227 327 aa9.4□□□□□ -0.9
PRDM2-201ENST00000235372 KIF3AQ9Y496 699 aa9.4□□□□□ -0.9
PRDM2-201ENST00000235372 KANK1Q14678 1352 aa9.4□□□□□ -0.9
PRDM2-201ENST00000235372 PHF14O94880 888 aa9.4□□□□□ -0.9
PRDM2-201ENST00000235372 AMOTL1Q8IY63 956 aa9.4□□□□□ -0.9
PRDM2-201ENST00000235372 CCDC180Q9P1Z9 1646 aa9.4□□□□□ -0.91
PRDM2-201ENST00000235372 RSF1Q96T23 1441 aaPredicted RBP9.4□□□□□ -0.91
PRDM2-201ENST00000235372 CC2D1BQ5T0F9 858 aaKnown RBP9.39□□□□□ -0.91
PRDM2-201ENST00000235372 NOL10Q9BSC4 688 aaKnown RBP9.39□□□□□ -0.91
PRDM2-201ENST00000235372 AKAP17AQ02040 695 aaKnown RBP9.39□□□□□ -0.91
PRDM2-201ENST00000235372 SF3A1Q15459 793 aaKnown RBP9.39□□□□□ -0.91
PRDM2-201ENST00000235372 ODF2Q5BJF6 829 aa9.38□□□□□ -0.91
PRDM2-201ENST00000235372 SPAG9O60271 1321 aaKnown RBP9.38□□□□□ -0.91
PRDM2-201ENST00000235372 TRIM6-TRIM34B2RNG4 842 aa9.38□□□□□ -0.91
PRDM2-201ENST00000235372 SUPT16HQ9Y5B9 1047 aaKnown RBP9.38□□□□□ -0.91
PRDM2-201ENST00000235372 CCDC43Q96MW1 224 aaKnown RBP9.37□□□□□ -0.91
PRDM2-201ENST00000235372 HMMRO75330 724 aa9.37□□□□□ -0.91
PRDM2-201ENST00000235372 GZF1Q9H116 711 aaPredicted RBP9.36□□□□□ -0.91
PRDM2-201ENST00000235372 RAD21O60216 631 aa9.36□□□□□ -0.91
PRDM2-201ENST00000235372 CCAR2Q8N163 923 aaKnown RBP9.36□□□□□ -0.91
PRDM2-201ENST00000235372 MSH5O43196 834 aa9.36□□□□□ -0.91
PRDM2-201ENST00000235372 HDGFL2Q7Z4V5 671 aaPredicted RBP9.36□□□□□ -0.91
PRDM2-201ENST00000235372 PPP4R2Q9NY27 417 aa9.36□□□□□ -0.91
PRDM2-201ENST00000235372 PCMTD1Q96MG8 357 aaPredicted RBP9.36□□□□□ -0.91
PRDM2-201ENST00000235372 MORC1Q86VD1 984 aa9.35□□□□□ -0.91
PRDM2-201ENST00000235372 R3HCC1Q9Y3T6 440 aaKnown RBP9.35□□□□□ -0.91
PRDM2-201ENST00000235372 CCDC47Q96A33 483 aaKnown RBP9.35□□□□□ -0.91
PRDM2-201ENST00000235372 CHMP4CQ96CF2 233 aa9.35□□□□□ -0.91
PRDM2-201ENST00000235372 KIF16BQ96L93 1317 aa9.35□□□□□ -0.91
PRDM2-201ENST00000235372 MLECQ14165 292 aa9.35□□□□□ -0.91
PRDM2-201ENST00000235372 STK31Q9BXU1 1019 aa9.35□□□□□ -0.91
PRDM2-201ENST00000235372 TMF1P82094 1093 aa9.35□□□□□ -0.91
PRDM2-201ENST00000235372 PAF1Q8N7H5 531 aa9.34□□□□□ -0.91
PRDM2-201ENST00000235372 H3BQV1 296 aa9.34□□□□□ -0.91
PRDM2-201ENST00000235372 IPO7O95373 1038 aaKnown RBP9.34□□□□□ -0.91
PRDM2-201ENST00000235372 CT47A1Q5JQC4 288 aaPredicted RBP9.34□□□□□ -0.91
PRDM2-201ENST00000235372 IFFO2Q5TF58 517 aa9.34□□□□□ -0.91
PRDM2-201ENST00000235372 WWC2Q6AWC2 1192 aa9.34□□□□□ -0.91
PRDM2-201ENST00000235372 CDR1P51861 262 aa9.34□□□□□ -0.91
PRDM2-201ENST00000235372 RDXP35241 583 aaKnown RBP9.33□□□□□ -0.92
PRDM2-201ENST00000235372 SYNE3Q6ZMZ3 975 aa9.33□□□□□ -0.92
PRDM2-201ENST00000235372 ANKRD20A12PQ8NF67 263 aa9.33□□□□□ -0.92
PRDM2-201ENST00000235372 CFDP1Q9UEE9 299 aaPredicted RBP9.33□□□□□ -0.92
PRDM2-201ENST00000235372 GOLGA6L19H0YKK7 550 aa9.32□□□□□ -0.92
PRDM2-201ENST00000235372 BCL11BQ9C0K0 894 aaPredicted RBP9.32□□□□□ -0.92
PRDM2-201ENST00000235372 ITPRIPQ8IWB1 547 aa9.32□□□□□ -0.92
PRDM2-201ENST00000235372 LRRFIP1Q32MZ4 808 aaKnown RBP9.3□□□□□ -0.92
PRDM2-201ENST00000235372 B4GALNT3Q6L9W6 998 aa9.3□□□□□ -0.92
PRDM2-201ENST00000235372 FAM184AQ8NB25 1140 aa9.3□□□□□ -0.92
PRDM2-201ENST00000235372 RUFY1Q96T51 708 aa9.3□□□□□ -0.92
PRDM2-201ENST00000235372 ERCC6Q03468 1493 aa9.3□□□□□ -0.92
PRDM2-201ENST00000235372 AK7Q96M32 723 aa9.3□□□□□ -0.92
PRDM2-201ENST00000235372 RWDD1Q9H446 243 aaPredicted RBP9.3□□□□□ -0.92
PRDM2-201ENST00000235372 TCERG1O14776 1098 aaKnown RBP9.3□□□□□ -0.92
PRDM2-201ENST00000235372 HOOK1Q9UJC3 728 aaKnown RBP9.3□□□□□ -0.92
PRDM2-201ENST00000235372 SAFB2Q14151 953 aaKnown RBP eCLIP9.3□□□□□ -0.92
PRDM2-201ENST00000235372 MEX3CQ5U5Q3 659 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms