RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Kdm6bQ5NCY0 1641 aa21.09■□□□□ 0.97
Ssr1-204ENSMUST00000225319 Ythdc2B2RR83 1445 aaKnown RBP21.09■□□□□ 0.97
Ssr1-204ENSMUST00000225319 Abcc5Q9R1X5 1436 aa21.08■□□□□ 0.97
Ssr1-204ENSMUST00000225319 Gapvd1Q6PAR5 1458 aa21.08■□□□□ 0.97
Ssr1-204ENSMUST00000225319 Fam50aQ9WV03 339 aaKnown RBP21.07■□□□□ 0.96
Ssr1-204ENSMUST00000225319 Rnf17Q99MV7 1640 aa21.07■□□□□ 0.96
Ssr1-204ENSMUST00000225319 Plekhh2Q8C115 1491 aa21.07■□□□□ 0.96
Ssr1-204ENSMUST00000225319 Abca8bQ8K440 1620 aa21.05■□□□□ 0.96
Ssr1-204ENSMUST00000225319 Pabpn1Q8CCS6 302 aaKnown RBP21.05■□□□□ 0.96
Ssr1-204ENSMUST00000225319 Igf1rQ60751 1373 aa21.05■□□□□ 0.96
Ssr1-204ENSMUST00000225319 PtprtQ99M80 1454 aa21.04■□□□□ 0.96
Ssr1-204ENSMUST00000225319 Dennd4bQ3U1Y4 1499 aa21.03■□□□□ 0.96
Ssr1-204ENSMUST00000225319 Fhod3Q76LL6 1578 aa21.02■□□□□ 0.96
Ssr1-204ENSMUST00000225319 Fkbp15Q6P9Q6 1216 aaKnown RBP21.01■□□□□ 0.95
Ssr1-204ENSMUST00000225319 Pdcd11Q6NS46 1862 aaKnown RBP21.01■□□□□ 0.95
Ssr1-204ENSMUST00000225319 Cep170Q6A065 1588 aa21■□□□□ 0.95
Ssr1-204ENSMUST00000225319 Cdk11bP24788 784 aaKnown RBP21■□□□□ 0.95
Ssr1-204ENSMUST00000225319 Il16O54824 1322 aa21■□□□□ 0.95
Ssr1-204ENSMUST00000225319 Ccer2J3QPU5 274 aa21■□□□□ 0.95
Ssr1-204ENSMUST00000225319 AI481877A2ALV5 1481 aa20.99■□□□□ 0.95
Ssr1-204ENSMUST00000225319 Las1lA2BE28 776 aaKnown RBP20.99■□□□□ 0.95
Ssr1-204ENSMUST00000225319 Gm32742A0A1B0GT42 1604 aa20.98■□□□□ 0.95
Ssr1-204ENSMUST00000225319 Mtus2Q3UHD3 1353 aa20.98■□□□□ 0.95
Ssr1-204ENSMUST00000225319 Kdm3bQ6ZPY7 1562 aa20.97■□□□□ 0.95
Ssr1-204ENSMUST00000225319 Atp10dQ8K2X1 1416 aa20.97■□□□□ 0.95
Ssr1-204ENSMUST00000225319 Pelp1Q9DBD5 1123 aaKnown RBP20.96■□□□□ 0.95
Ssr1-204ENSMUST00000225319 Sall2Q9QX96 1004 aa20.96■□□□□ 0.95
Ssr1-204ENSMUST00000225319 Ankrd36D3Z4K0 1415 aa20.95■□□□□ 0.94
Ssr1-204ENSMUST00000225319 Cfap74Q3UY96 1578 aa20.95■□□□□ 0.94
Ssr1-204ENSMUST00000225319 Lrrc9Q8CDN9 1456 aa20.94■□□□□ 0.94
Ssr1-204ENSMUST00000225319 Tdrd9Q14BI7 1383 aa20.94■□□□□ 0.94
Ssr1-204ENSMUST00000225319 SphkapQ6NSW3 1687 aa20.93■□□□□ 0.94
Ssr1-204ENSMUST00000225319 Cabp1Q9JLK7 227 aa20.92■□□□□ 0.94
Ssr1-204ENSMUST00000225319 Arhgap5P97393 1501 aa20.91■□□□□ 0.94
Ssr1-204ENSMUST00000225319 Neurl4Q5NCX5 1563 aa20.9■□□□□ 0.94
Ssr1-204ENSMUST00000225319 Chic2Q9D9G3 165 aa20.9■□□□□ 0.94
Ssr1-204ENSMUST00000225319 Abcc3B2RX12 1523 aa20.88■□□□□ 0.93
Ssr1-204ENSMUST00000225319 Znf608Q56A10 1511 aa20.88■□□□□ 0.93
Ssr1-204ENSMUST00000225319 Fmn2Q9JL04 1578 aa20.88■□□□□ 0.93
Ssr1-204ENSMUST00000225319 Mast1Q9R1L5 1570 aa20.87■□□□□ 0.93
Ssr1-204ENSMUST00000225319 Hecw1Q8K4P8 1604 aa20.87■□□□□ 0.93
Ssr1-204ENSMUST00000225319 Adgrb2Q8CGM1 1561 aa20.84■□□□□ 0.93
Ssr1-204ENSMUST00000225319 Setbp1Q9Z180 1582 aa20.84■□□□□ 0.93
Ssr1-204ENSMUST00000225319 Adgrl2Q8JZZ7 1487 aa20.83■□□□□ 0.92
Ssr1-204ENSMUST00000225319 NclP09405 707 aaKnown RBP20.82■□□□□ 0.92
Ssr1-204ENSMUST00000225319 TonslQ6NZL6 1363 aa20.82■□□□□ 0.92
Ssr1-204ENSMUST00000225319 Lamc1P02468 1607 aaKnown RBP20.81■□□□□ 0.92
Ssr1-204ENSMUST00000225319 Zfyve16Q80U44 1528 aa20.81■□□□□ 0.92
Ssr1-204ENSMUST00000225319 Trappc8E9PWG2 1437 aa20.79■□□□□ 0.92
Ssr1-204ENSMUST00000225319 AlkP97793 1621 aa20.79■□□□□ 0.92
Ssr1-204ENSMUST00000225319 Neurod1Q60867 357 aa20.78■□□□□ 0.92
Ssr1-204ENSMUST00000225319 Kif21bQ9QXL1 1668 aa20.77■□□□□ 0.92
Ssr1-204ENSMUST00000225319 ClspnQ80YR7 1315 aa20.77■□□□□ 0.92
Ssr1-204ENSMUST00000225319 Kidins220E9Q9B7 1793 aa20.77■□□□□ 0.92
Ssr1-204ENSMUST00000225319 Gm156Q58A37 223 aa20.76■□□□□ 0.91
Ssr1-204ENSMUST00000225319 Adgrl3Q80TS3 1537 aa20.76■□□□□ 0.91
Ssr1-204ENSMUST00000225319 Trpm2Q91YD4 1506 aa20.75■□□□□ 0.91
Ssr1-204ENSMUST00000225319 Cdc42bpbQ7TT50 1713 aa20.74■□□□□ 0.91
Ssr1-204ENSMUST00000225319 Wdr66E9Q743 1299 aa20.74■□□□□ 0.91
Ssr1-204ENSMUST00000225319 Eid3Q3V124 375 aa20.74■□□□□ 0.91
Ssr1-204ENSMUST00000225319 Abca9Q8K449 1623 aa20.73■□□□□ 0.91
Ssr1-204ENSMUST00000225319 Ak9G3UYQ4 1894 aa20.72■□□□□ 0.91
Ssr1-204ENSMUST00000225319 Aebp2Q9Z248 504 aaKnown RBP20.71■□□□□ 0.91
Ssr1-204ENSMUST00000225319 Col17a1Q07563 1470 aa20.7■□□□□ 0.9
Ssr1-204ENSMUST00000225319 Pprc1Q6NZN1 1644 aa20.7■□□□□ 0.9
Ssr1-204ENSMUST00000225319 Mphosph9A6H5Y1 991 aa20.67■□□□□ 0.9
Ssr1-204ENSMUST00000225319 Sart1Q9Z315 806 aaKnown RBP20.67■□□□□ 0.9
Ssr1-204ENSMUST00000225319 Zfp644E9QA22 1323 aa20.63■□□□□ 0.89
Ssr1-204ENSMUST00000225319 Prdm16A2A935 1275 aa20.63■□□□□ 0.89
Ssr1-204ENSMUST00000225319 Ube2uB1AUC4 352 aa20.63■□□□□ 0.89
Ssr1-204ENSMUST00000225319 Clasp1Q80TV8 1535 aaKnown RBP20.62■□□□□ 0.89
Ssr1-204ENSMUST00000225319 Ifnlr1Q8CGK5 535 aa20.62■□□□□ 0.89
Ssr1-204ENSMUST00000225319 Ssh2Q5SW75 1423 aa20.62■□□□□ 0.89
Ssr1-204ENSMUST00000225319 Arid3cA6PWV5 409 aa20.6■□□□□ 0.89
Ssr1-204ENSMUST00000225319 Abca17E9PX95 1733 aa20.6■□□□□ 0.89
Ssr1-204ENSMUST00000225319 Supt6hQ62383 1726 aaKnown RBP20.6■□□□□ 0.89
Ssr1-204ENSMUST00000225319 AglF8VPN4 1532 aa20.59■□□□□ 0.89
Ssr1-204ENSMUST00000225319 Nup155Q99P88 1391 aaKnown RBP20.57■□□□□ 0.88
Ssr1-204ENSMUST00000225319 Camsap2Q8C1B1 1461 aa20.56■□□□□ 0.88
Ssr1-204ENSMUST00000225319 Hspa5P20029 655 aaKnown RBP20.55■□□□□ 0.88
Ssr1-204ENSMUST00000225319 Naip5Q9R016 1403 aa20.55■□□□□ 0.88
Ssr1-204ENSMUST00000225319 Kdm5cP41230 1554 aa20.55■□□□□ 0.88
Ssr1-204ENSMUST00000225319 Rprd2Q6NXI6 1469 aaKnown RBP20.54■□□□□ 0.88
Ssr1-204ENSMUST00000225319 Xrn1P97789 1719 aaKnown RBP20.54■□□□□ 0.88
Ssr1-204ENSMUST00000225319 Rrp7aQ9D1C9 280 aaKnown RBP20.54■□□□□ 0.88
Ssr1-204ENSMUST00000225319 Kiaa0556Q8C753 1610 aa20.54■□□□□ 0.88
Ssr1-204ENSMUST00000225319 Pik3c2gO70167 1506 aa20.53■□□□□ 0.88
Ssr1-204ENSMUST00000225319 Ttll5Q8CHB8 1328 aa20.53■□□□□ 0.88
Ssr1-204ENSMUST00000225319 PtprgQ05909 1442 aa20.52■□□□□ 0.88
Ssr1-204ENSMUST00000225319 Nos1Q9Z0J4 1429 aa20.52■□□□□ 0.88
Ssr1-204ENSMUST00000225319 Pkd2O35245 966 aa20.51■□□□□ 0.87
Ssr1-204ENSMUST00000225319 Anks4bQ8K3X6 423 aa20.51■□□□□ 0.87
Ssr1-204ENSMUST00000225319 Clstn2Q9ER65 966 aa20.51■□□□□ 0.87
Ssr1-204ENSMUST00000225319 Ttc37F8VPK0 1563 aa20.51■□□□□ 0.87
Ssr1-204ENSMUST00000225319 Robo2Q7TPD3 1470 aa20.5■□□□□ 0.87
Ssr1-204ENSMUST00000225319 DroshaQ5HZJ0 1373 aaKnown RBP20.5■□□□□ 0.87
Ssr1-204ENSMUST00000225319 Asxl1P59598 1514 aa20.49■□□□□ 0.87
Ssr1-204ENSMUST00000225319 OvosQ3UU35 1456 aa20.49■□□□□ 0.87
Ssr1-204ENSMUST00000225319 Atp10aO54827 1508 aa20.49■□□□□ 0.87
Ssr1-204ENSMUST00000225319 Lemd3Q9WU40 921 aa20.49■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms