RNA–Protein interactions for RNA: ENSMUST00000162057.7

Cldnd1-204, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Cldnd1, Length 1,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-204ENSMUST00000162057 Arid3cA6PWV5 409 aa34.3■■■■□ 3.08
Cldnd1-204ENSMUST00000162057 Pcdh10E9PXQ7 1057 aa34.26■■■■□ 3.08
Cldnd1-204ENSMUST00000162057 Lmtk2Q3TYD6 1471 aa34.25■■■■□ 3.07
Cldnd1-204ENSMUST00000162057 Ppp1r18Q8BQ30 594 aa34.23■■■■□ 3.07
Cldnd1-204ENSMUST00000162057 Ttc37F8VPK0 1563 aa34.22■■■■□ 3.07
Cldnd1-204ENSMUST00000162057 Rnf17Q99MV7 1640 aa34.16■■■■□ 3.06
Cldnd1-204ENSMUST00000162057 Ccnb3Q810T2 1396 aa34.13■■■■□ 3.05
Cldnd1-204ENSMUST00000162057 A2mQ6GQT1 1474 aa34.12■■■■□ 3.05
Cldnd1-204ENSMUST00000162057 Depdc5P61460 1591 aa34.11■■■■□ 3.05
Cldnd1-204ENSMUST00000162057 AdgbG3UZ78 1657 aa34.09■■■■□ 3.05
Cldnd1-204ENSMUST00000162057 Zfyve16Q80U44 1528 aa34.08■■■■□ 3.05
Cldnd1-204ENSMUST00000162057 Adcy10Q8C0T9 1614 aa34.07■■■■□ 3.04
Cldnd1-204ENSMUST00000162057 AglF8VPN4 1532 aa34.04■■■■□ 3.04
Cldnd1-204ENSMUST00000162057 Arhgap5P97393 1501 aa34.03■■■■□ 3.04
Cldnd1-204ENSMUST00000162057 Mlh3A0A1Y7VMP7 1443 aa34.01■■■■□ 3.04
Cldnd1-204ENSMUST00000162057 Caskin1Q6P9K8 1431 aa33.95■■■■□ 3.03
Cldnd1-204ENSMUST00000162057 Arhgef40Q3UPH7 1517 aa33.94■■■■□ 3.02
Cldnd1-204ENSMUST00000162057 Pdcd11Q6NS46 1862 aaKnown RBP33.94■■■■□ 3.02
Cldnd1-204ENSMUST00000162057 Abca9Q8K449 1623 aa33.93■■■■□ 3.02
Cldnd1-204ENSMUST00000162057 Ehmt2Q9Z148 1263 aaKnown RBP33.9■■■■□ 3.02
Cldnd1-204ENSMUST00000162057 Gm32742A0A1B0GT42 1604 aa33.9■■■■□ 3.02
Cldnd1-204ENSMUST00000162057 Cfap74Q3UY96 1578 aa33.89■■■■□ 3.02
Cldnd1-204ENSMUST00000162057 Tdrd9Q14BI7 1383 aa33.86■■■■□ 3.01
Cldnd1-204ENSMUST00000162057 Kdm6bQ5NCY0 1641 aa33.84■■■■□ 3.01
Cldnd1-204ENSMUST00000162057 UbtfP25976 765 aaKnown RBP33.83■■■■□ 3.01
Cldnd1-204ENSMUST00000162057 Kidins220E9Q9B7 1793 aa33.81■■■■□ 3
Cldnd1-204ENSMUST00000162057 3425401B19RikD3Z1D3 1412 aa33.8■■■■□ 3
Cldnd1-204ENSMUST00000162057 Cdk11bP24788 784 aaKnown RBP33.79■■■■□ 3
Cldnd1-204ENSMUST00000162057 Abcc3B2RX12 1523 aa33.77■■■■□ 3
Cldnd1-204ENSMUST00000162057 Fndc1E9Q043 1732 aa33.77■■■■□ 3
Cldnd1-204ENSMUST00000162057 Trappc8E9PWG2 1437 aa33.74■■■□□ 2.99
Cldnd1-204ENSMUST00000162057 Kiaa0556Q8C753 1610 aa33.71■■■□□ 2.99
Cldnd1-204ENSMUST00000162057 Hecw1Q8K4P8 1604 aa33.69■■■□□ 2.98
Cldnd1-204ENSMUST00000162057 Plekhh2Q8C115 1491 aa33.66■■■□□ 2.98
Cldnd1-204ENSMUST00000162057 Abcc5Q9R1X5 1436 aa33.63■■■□□ 2.97
Cldnd1-204ENSMUST00000162057 Mtus2Q3UHD3 1353 aa33.62■■■□□ 2.97
Cldnd1-204ENSMUST00000162057 Cdc42bpbQ7TT50 1713 aa33.6■■■□□ 2.97
Cldnd1-204ENSMUST00000162057 OvosQ3UU35 1456 aa33.6■■■□□ 2.97
Cldnd1-204ENSMUST00000162057 Lemd3Q9WU40 921 aa33.58■■■□□ 2.97
Cldnd1-204ENSMUST00000162057 Hecw2Q6I6G8 1578 aa33.58■■■□□ 2.97
Cldnd1-204ENSMUST00000162057 Kdm5cP41230 1554 aa33.55■■■□□ 2.96
Cldnd1-204ENSMUST00000162057 Sart1Q9Z315 806 aaKnown RBP33.54■■■□□ 2.96
Cldnd1-204ENSMUST00000162057 Synj2Q9D2G5 1434 aa33.53■■■□□ 2.96
Cldnd1-204ENSMUST00000162057 Cul9Q80TT8 1865 aa33.52■■■□□ 2.96
Cldnd1-204ENSMUST00000162057 Ncapd3Q6ZQK0 1506 aa33.52■■■□□ 2.96
Cldnd1-204ENSMUST00000162057 Mast1Q9R1L5 1570 aa33.5■■■□□ 2.95
Cldnd1-204ENSMUST00000162057 Fmn2Q9JL04 1578 aa33.48■■■□□ 2.95
Cldnd1-204ENSMUST00000162057 SphkapQ6NSW3 1687 aa33.48■■■□□ 2.95
Cldnd1-204ENSMUST00000162057 Neurl4Q5NCX5 1563 aa33.47■■■□□ 2.95
Cldnd1-204ENSMUST00000162057 Naip2Q9QUK4 1447 aa33.45■■■□□ 2.95
Cldnd1-204ENSMUST00000162057 Atp10aO54827 1508 aa33.43■■■□□ 2.94
Cldnd1-204ENSMUST00000162057 Il16O54824 1322 aa33.42■■■□□ 2.94
Cldnd1-204ENSMUST00000162057 UacaQ8CGB3 1411 aa33.42■■■□□ 2.94
Cldnd1-204ENSMUST00000162057 Cabp1Q9JLK7 227 aa33.41■■■□□ 2.94
Cldnd1-204ENSMUST00000162057 RereQ80TZ9 1558 aa33.4■■■□□ 2.94
Cldnd1-204ENSMUST00000162057 Fam50aQ9WV03 339 aaKnown RBP33.4■■■□□ 2.94
Cldnd1-204ENSMUST00000162057 Kdm3bQ6ZPY7 1562 aa33.39■■■□□ 2.94
Cldnd1-204ENSMUST00000162057 Dip2cE9PWR4 1557 aa33.39■■■□□ 2.94
Cldnd1-204ENSMUST00000162057 Chic2Q9D9G3 165 aa33.38■■■□□ 2.93
Cldnd1-204ENSMUST00000162057 Ptch1Q61115 1434 aa33.36■■■□□ 2.93
Cldnd1-204ENSMUST00000162057 Rfx7F8VPJ6 1459 aa33.33■■■□□ 2.93
Cldnd1-204ENSMUST00000162057 Adgrl2Q8JZZ7 1487 aa33.33■■■□□ 2.93
Cldnd1-204ENSMUST00000162057 Adgrb2Q8CGM1 1561 aa33.32■■■□□ 2.92
Cldnd1-204ENSMUST00000162057 Kif14L0N7N1 1674 aaKnown RBP33.32■■■□□ 2.92
Cldnd1-204ENSMUST00000162057 Qser1A2BIE1 1698 aa33.28■■■□□ 2.92
Cldnd1-204ENSMUST00000162057 Xrn1P97789 1719 aaKnown RBP33.28■■■□□ 2.92
Cldnd1-204ENSMUST00000162057 Mia2Q91ZV0 1396 aa33.28■■■□□ 2.92
Cldnd1-204ENSMUST00000162057 Map3k5O35099 1380 aa33.27■■■□□ 2.92
Cldnd1-204ENSMUST00000162057 Prdm16A2A935 1275 aa33.27■■■□□ 2.92
Cldnd1-204ENSMUST00000162057 Dnajc5gQ8C632 165 aa33.26■■■□□ 2.91
Cldnd1-204ENSMUST00000162057 Rrp7aQ9D1C9 280 aaKnown RBP33.26■■■□□ 2.91
Cldnd1-204ENSMUST00000162057 Yeats2Q3TUF7 1407 aa33.25■■■□□ 2.91
Cldnd1-204ENSMUST00000162057 Nos1Q9Z0J4 1429 aa33.25■■■□□ 2.91
Cldnd1-204ENSMUST00000162057 Fhod3Q76LL6 1578 aa33.24■■■□□ 2.91
Cldnd1-204ENSMUST00000162057 Cdc42bpgQ80UW5 1551 aa33.24■■■□□ 2.91
Cldnd1-204ENSMUST00000162057 Abca17E9PX95 1733 aa33.22■■■□□ 2.91
Cldnd1-204ENSMUST00000162057 Zmym4A2A791 1549 aaKnown RBP33.21■■■□□ 2.91
Cldnd1-204ENSMUST00000162057 NclP09405 707 aaKnown RBP33.21■■■□□ 2.91
Cldnd1-204ENSMUST00000162057 Fhad1A6PWD2 1420 aa33.2■■■□□ 2.91
Cldnd1-204ENSMUST00000162057 Alpk3Q924C5 1678 aa33.19■■■□□ 2.9
Cldnd1-204ENSMUST00000162057 Vps8Q0P5W1 1427 aa33.17■■■□□ 2.9
Cldnd1-204ENSMUST00000162057 Plppr3Q7TPB0 716 aa33.17■■■□□ 2.9
Cldnd1-204ENSMUST00000162057 Trpm1Q2TV84 1622 aa33.16■■■□□ 2.9
Cldnd1-204ENSMUST00000162057 Cfap65Q3V0B4 1847 aa33.14■■■□□ 2.9
Cldnd1-204ENSMUST00000162057 Znf518aB2RRF6 1478 aaKnown RBP33.13■■■□□ 2.89
Cldnd1-204ENSMUST00000162057 NpatQ8BMA5 1420 aa33.12■■■□□ 2.89
Cldnd1-204ENSMUST00000162057 Ssh2Q5SW75 1423 aa33.1■■■□□ 2.89
Cldnd1-204ENSMUST00000162057 Dennd4bQ3U1Y4 1499 aa33.09■■■□□ 2.89
Cldnd1-204ENSMUST00000162057 Gli2Q0VGT2 1544 aa33.08■■■□□ 2.89
Cldnd1-204ENSMUST00000162057 Plch2A2AP18 1501 aa33.06■■■□□ 2.88
Cldnd1-204ENSMUST00000162057 Spag9Q58A65 1321 aaKnown RBP33.04■■■□□ 2.88
Cldnd1-204ENSMUST00000162057 Usp54Q8BL06 1588 aaKnown RBP33.04■■■□□ 2.88
Cldnd1-204ENSMUST00000162057 Adamtsl3G3UXC7 1706 aa33.03■■■□□ 2.88
Cldnd1-204ENSMUST00000162057 AlkP97793 1621 aa33.02■■■□□ 2.88
Cldnd1-204ENSMUST00000162057 Topbp1Q6ZQF0 1515 aa33.01■■■□□ 2.87
Cldnd1-204ENSMUST00000162057 Mier1Q5UAK0 511 aa33■■■□□ 2.87
Cldnd1-204ENSMUST00000162057 Naip6Q9JIB6 1403 aa33■■■□□ 2.87
Cldnd1-204ENSMUST00000162057 Uggt2E9Q4X2 1504 aa32.99■■■□□ 2.87
Cldnd1-204ENSMUST00000162057 Camsap2Q8C1B1 1461 aa32.97■■■□□ 2.87
Cldnd1-204ENSMUST00000162057 Kif1bQ60575 1816 aaKnown RBP32.97■■■□□ 2.87
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms