RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Pdzrn4E9PUZ9 1014 aa8.34□□□□□ -1.07
Hmgb1-203ENSMUST00000110505 Rsph6aQ8CDR2 708 aa8.34□□□□□ -1.07
Hmgb1-203ENSMUST00000110505 Iqgap2Q3UQ44 1575 aa8.33□□□□□ -1.08
Hmgb1-203ENSMUST00000110505 Rhox8Q6VSS7 320 aa8.32□□□□□ -1.08
Hmgb1-203ENSMUST00000110505 Crybg2B7ZCC2 1516 aa8.32□□□□□ -1.08
Hmgb1-203ENSMUST00000110505 Smarca4Q3TKT4 1613 aaKnown RBP8.32□□□□□ -1.08
Hmgb1-203ENSMUST00000110505 Frmpd1A2AKB4 1549 aa8.3□□□□□ -1.08
Hmgb1-203ENSMUST00000110505 Cecr2E9Q2Z1 1453 aa8.29□□□□□ -1.08
Hmgb1-203ENSMUST00000110505 Pbx2O35984 430 aa8.29□□□□□ -1.08
Hmgb1-203ENSMUST00000110505 Wdr62Q3U3T8 1523 aa8.29□□□□□ -1.08
Hmgb1-203ENSMUST00000110505 Mier1Q5UAK0 511 aa8.29□□□□□ -1.08
Hmgb1-203ENSMUST00000110505 Phldb1Q6PDH0 1371 aaKnown RBP8.28□□□□□ -1.08
Hmgb1-203ENSMUST00000110505 CatipB9EKE5 520 aa8.28□□□□□ -1.08
Hmgb1-203ENSMUST00000110505 Stk24Q99KH8 431 aa8.27□□□□□ -1.09
Hmgb1-203ENSMUST00000110505 Zbtb22Q9Z0G7 638 aa8.27□□□□□ -1.09
Hmgb1-203ENSMUST00000110505 Ubl4bQ9CQ84 188 aa8.26□□□□□ -1.09
Hmgb1-203ENSMUST00000110505 Erich4Q3UNU4 136 aa8.25□□□□□ -1.09
Hmgb1-203ENSMUST00000110505 Mnx1Q9QZW9 404 aa8.24□□□□□ -1.09
Hmgb1-203ENSMUST00000110505 Fmr1nbQ80ZA7 238 aa8.23□□□□□ -1.09
Hmgb1-203ENSMUST00000110505 Ccdc180J3QNE4 1664 aa8.23□□□□□ -1.09
Hmgb1-203ENSMUST00000110505 Cypt1Q8CH20 168 aa8.23□□□□□ -1.09
Hmgb1-203ENSMUST00000110505 Mrc2Q64449 1479 aa8.22□□□□□ -1.09
Hmgb1-203ENSMUST00000110505 Stk25Q9Z2W1 426 aa8.22□□□□□ -1.09
Hmgb1-203ENSMUST00000110505 Znf354bQ9QXT9 601 aa8.21□□□□□ -1.09
Hmgb1-203ENSMUST00000110505 Klra4Q60651 263 aa8.19□□□□□ -1.1
Hmgb1-203ENSMUST00000110505 Rgl2Q61193 778 aa8.18□□□□□ -1.1
Hmgb1-203ENSMUST00000110505 Lhx6Q9R1R0 363 aa8.18□□□□□ -1.1
Hmgb1-203ENSMUST00000110505 Unc13aQ4KUS2 1712 aa8.16□□□□□ -1.1
Hmgb1-203ENSMUST00000110505 Slc24a1Q91WD8 1130 aa8.16□□□□□ -1.1
Hmgb1-203ENSMUST00000110505 Baz1bQ9Z277 1479 aa8.16□□□□□ -1.1
Hmgb1-203ENSMUST00000110505 GcgrQ61606 485 aa8.15□□□□□ -1.11
Hmgb1-203ENSMUST00000110505 Gabbr2Q80T41 940 aa8.13□□□□□ -1.11
Hmgb1-203ENSMUST00000110505 Gm11939A2A592 99 aa8.12□□□□□ -1.11
Hmgb1-203ENSMUST00000110505 Slc4a2P13808 1237 aaKnown RBP8.12□□□□□ -1.11
Hmgb1-203ENSMUST00000110505 Crim1Q9JLL0 1037 aa8.12□□□□□ -1.11
Hmgb1-203ENSMUST00000110505 Erbb3Q61526 1339 aa8.12□□□□□ -1.11
Hmgb1-203ENSMUST00000110505 Skiv2lQ6NZR5 1244 aa8.1□□□□□ -1.11
Hmgb1-203ENSMUST00000110505 Myt1Q8CFC2 1127 aa8.1□□□□□ -1.11
Hmgb1-203ENSMUST00000110505 Inpp5dQ9ES52 1191 aa8.1□□□□□ -1.11
Hmgb1-203ENSMUST00000110505 UncxO08934 530 aa8.09□□□□□ -1.11
Hmgb1-203ENSMUST00000110505 Lrriq1Q0P5X1 1673 aa8.08□□□□□ -1.12
Hmgb1-203ENSMUST00000110505 Lrrc14bQ3UJB3 510 aa8.08□□□□□ -1.12
Hmgb1-203ENSMUST00000110505 Saxo1B1AXP3 476 aa8.06□□□□□ -1.12
Hmgb1-203ENSMUST00000110505 Fbxo31Q3TQF0 507 aa8.06□□□□□ -1.12
Hmgb1-203ENSMUST00000110505 Pcdhb20Q91XZ9 799 aa8.05□□□□□ -1.12
Hmgb1-203ENSMUST00000110505 Sgip1Q8VD37 806 aa8.04□□□□□ -1.12
Hmgb1-203ENSMUST00000110505 Rsf1E9PWW9 1441 aaKnown RBP8.02□□□□□ -1.13
Hmgb1-203ENSMUST00000110505 JmyQ9QXM1 983 aa8.01□□□□□ -1.13
Hmgb1-203ENSMUST00000110505 Pdcd7Q9WTY1 482 aa8.01□□□□□ -1.13
Hmgb1-203ENSMUST00000110505 CftrP26361 1476 aa8□□□□□ -1.13
Hmgb1-203ENSMUST00000110505 Kif21aQ9QXL2 1672 aa7.98□□□□□ -1.13
Hmgb1-203ENSMUST00000110505 Kctd12Q6WVG3 327 aa7.98□□□□□ -1.13
Hmgb1-203ENSMUST00000110505 Hyal3Q8VEI3 412 aa7.98□□□□□ -1.13
Hmgb1-203ENSMUST00000110505 Cux2P70298 1426 aa7.98□□□□□ -1.13
Hmgb1-203ENSMUST00000110505 Synj1Q8CHC4 1574 aa7.98□□□□□ -1.13
Hmgb1-203ENSMUST00000110505 Shroom2A2ALU4 1481 aa7.97□□□□□ -1.13
Hmgb1-203ENSMUST00000110505 Speer2E9Q9U2 264 aa7.97□□□□□ -1.13
Hmgb1-203ENSMUST00000110505 ZyxQ62523 564 aa7.97□□□□□ -1.13
Hmgb1-203ENSMUST00000110505 Cttnbp2B9EJA2 1648 aa7.96□□□□□ -1.13
Hmgb1-203ENSMUST00000110505 Col17a1Q07563 1470 aa7.96□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 1700006A11RikB9EHI3 544 aa7.96□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 A930017K11RikE0CXQ2 571 aa7.96□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Ms4a4cQ9D3F6 226 aa7.96□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Masp1P98064 704 aa7.95□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Itgbl1Q8VDV0 494 aa7.95□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Emid1Q91VF5 444 aa7.95□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Eif4g3Q80XI3 1579 aaKnown RBP7.94□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Fbxo11Q7TPD1 930 aaKnown RBP7.94□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Rem2Q8VEL9 341 aa7.94□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Gm13695A2AK44 830 aa7.93□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Kif15Q6P9L6 1387 aa7.93□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Vsig10D3YX43 558 aa7.92□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Dnajc5gQ8C632 165 aa7.92□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Itga6Q61739 1091 aa7.92□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Pdia6Q922R8 440 aaKnown RBP7.92□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 IncenpQ9WU62 880 aa7.92□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Eya1P97767 591 aa7.9□□□□□ -1.14
Hmgb1-203ENSMUST00000110505 Skap1Q3UUV5 355 aa7.89□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Ufsp1Q9CZP0 217 aa7.89□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 LipiF6YQT7 476 aa7.88□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Ffar3Q3UFD7 319 aa7.88□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Esf1Q3V1V3 845 aaKnown RBP7.87□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Fam221bQ8C627 487 aa7.87□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Pabpn1Q8CCS6 302 aaKnown RBP7.87□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Nfxl1E9Q8I7 918 aaKnown RBP7.86□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Brd4Q9ESU6 1400 aaKnown RBP7.86□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Npm1Q61937 292 aaKnown RBP7.86□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Urb2E9Q7L1 1524 aaKnown RBP7.85□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Ccdc136Q3TVA9 1136 aa7.85□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Plekhg3Q4VAC9 1341 aa7.84□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 P3h3Q8CG70 732 aa7.84□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Slc12a5Q91V14 1138 aa7.84□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Noa1Q9JJG9 693 aaKnown RBP7.84□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Top2bQ64511 1612 aa7.84□□□□□ -1.15
Hmgb1-203ENSMUST00000110505 Mllt6B1AR10 1109 aa7.83□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Plb1Q3TTY0 1478 aa7.83□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Prrt3Q6PE13 971 aa7.83□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Lrfn2Q80TG9 788 aa7.83□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Sirt1Q923E4 737 aa7.83□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Nudt12Q9DCN1 462 aa7.83□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms