RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 Abca8bQ8K440 1620 aa28.86■■■□□ 2.21
Ttc39a-203ENSMUST00000106619 Gm156Q58A37 223 aa28.85■■■□□ 2.21
Ttc39a-203ENSMUST00000106619 Col17a1Q07563 1470 aa28.85■■■□□ 2.21
Ttc39a-203ENSMUST00000106619 Lrrc9Q8CDN9 1456 aa28.84■■■□□ 2.21
Ttc39a-203ENSMUST00000106619 Naip2Q9QUK4 1447 aa28.83■■■□□ 2.21
Ttc39a-203ENSMUST00000106619 Adgrl3Q80TS3 1537 aa28.83■■■□□ 2.21
Ttc39a-203ENSMUST00000106619 Caskin1Q6P9K8 1431 aa28.83■■■□□ 2.2
Ttc39a-203ENSMUST00000106619 Znf608Q56A10 1511 aa28.8■■■□□ 2.2
Ttc39a-203ENSMUST00000106619 Rnf17Q99MV7 1640 aa28.78■■■□□ 2.2
Ttc39a-203ENSMUST00000106619 Fam50aQ9WV03 339 aaKnown RBP28.78■■■□□ 2.2
Ttc39a-203ENSMUST00000106619 Kdm6bQ5NCY0 1641 aa28.77■■■□□ 2.2
Ttc39a-203ENSMUST00000106619 Mia2Q91ZV0 1396 aa28.76■■■□□ 2.19
Ttc39a-203ENSMUST00000106619 Abcc5Q9R1X5 1436 aa28.75■■■□□ 2.19
Ttc39a-203ENSMUST00000106619 Cdk11bP24788 784 aaKnown RBP28.75■■■□□ 2.19
Ttc39a-203ENSMUST00000106619 Plekhh2Q8C115 1491 aa28.74■■■□□ 2.19
Ttc39a-203ENSMUST00000106619 Ifnlr1Q8CGK5 535 aa28.73■■■□□ 2.19
Ttc39a-203ENSMUST00000106619 UacaQ8CGB3 1411 aa28.72■■■□□ 2.19
Ttc39a-203ENSMUST00000106619 Setbp1Q9Z180 1582 aa28.72■■■□□ 2.19
Ttc39a-203ENSMUST00000106619 Fhad1A6PWD2 1420 aa28.72■■■□□ 2.19
Ttc39a-203ENSMUST00000106619 Tdrd9Q14BI7 1383 aa28.71■■■□□ 2.19
Ttc39a-203ENSMUST00000106619 Arhgap5P97393 1501 aa28.69■■■□□ 2.18
Ttc39a-203ENSMUST00000106619 Mtus2Q3UHD3 1353 aa28.67■■■□□ 2.18
Ttc39a-203ENSMUST00000106619 Vps8Q0P5W1 1427 aa28.66■■■□□ 2.18
Ttc39a-203ENSMUST00000106619 Gm32742A0A1B0GT42 1604 aa28.65■■■□□ 2.18
Ttc39a-203ENSMUST00000106619 Rfx7F8VPJ6 1459 aa28.64■■■□□ 2.17
Ttc39a-203ENSMUST00000106619 Cfap74Q3UY96 1578 aa28.63■■■□□ 2.17
Ttc39a-203ENSMUST00000106619 NefmP08553 848 aa28.62■■■□□ 2.17
Ttc39a-203ENSMUST00000106619 Chic2Q9D9G3 165 aa28.62■■■□□ 2.17
Ttc39a-203ENSMUST00000106619 Il16O54824 1322 aa28.61■■■□□ 2.17
Ttc39a-203ENSMUST00000106619 Ak9G3UYQ4 1894 aa28.6■■■□□ 2.17
Ttc39a-203ENSMUST00000106619 Arid3cA6PWV5 409 aa28.6■■■□□ 2.17
Ttc39a-203ENSMUST00000106619 Cabp1Q9JLK7 227 aa28.6■■■□□ 2.17
Ttc39a-203ENSMUST00000106619 Pdcd11Q6NS46 1862 aaKnown RBP28.59■■■□□ 2.17
Ttc39a-203ENSMUST00000106619 Zfyve16Q80U44 1528 aa28.59■■■□□ 2.17
Ttc39a-203ENSMUST00000106619 Pprc1Q6NZN1 1644 aa28.57■■■□□ 2.16
Ttc39a-203ENSMUST00000106619 Abcc3B2RX12 1523 aa28.54■■■□□ 2.16
Ttc39a-203ENSMUST00000106619 Trappc8E9PWG2 1437 aa28.54■■■□□ 2.16
Ttc39a-203ENSMUST00000106619 Kdm3bQ6ZPY7 1562 aa28.53■■■□□ 2.16
Ttc39a-203ENSMUST00000106619 Dennd4bQ3U1Y4 1499 aa28.5■■■□□ 2.15
Ttc39a-203ENSMUST00000106619 SphkapQ6NSW3 1687 aa28.49■■■□□ 2.15
Ttc39a-203ENSMUST00000106619 Clasp1Q80TV8 1535 aaKnown RBP28.46■■■□□ 2.15
Ttc39a-203ENSMUST00000106619 NclP09405 707 aaKnown RBP28.45■■■□□ 2.15
Ttc39a-203ENSMUST00000106619 Abca9Q8K449 1623 aa28.45■■■□□ 2.14
Ttc39a-203ENSMUST00000106619 Ccer2J3QPU5 274 aa28.45■■■□□ 2.14
Ttc39a-203ENSMUST00000106619 Hecw1Q8K4P8 1604 aa28.44■■■□□ 2.14
Ttc39a-203ENSMUST00000106619 Fmn2Q9JL04 1578 aa28.44■■■□□ 2.14
Ttc39a-203ENSMUST00000106619 Neurl4Q5NCX5 1563 aa28.43■■■□□ 2.14
Ttc39a-203ENSMUST00000106619 Adgrb2Q8CGM1 1561 aa28.43■■■□□ 2.14
Ttc39a-203ENSMUST00000106619 Mast1Q9R1L5 1570 aa28.43■■■□□ 2.14
Ttc39a-203ENSMUST00000106619 Kidins220E9Q9B7 1793 aa28.42■■■□□ 2.14
Ttc39a-203ENSMUST00000106619 Sart1Q9Z315 806 aaKnown RBP28.4■■■□□ 2.14
Ttc39a-203ENSMUST00000106619 Adgrl2Q8JZZ7 1487 aa28.38■■■□□ 2.13
Ttc39a-203ENSMUST00000106619 Fhod3Q76LL6 1578 aa28.35■■■□□ 2.13
Ttc39a-203ENSMUST00000106619 AglF8VPN4 1532 aa28.35■■■□□ 2.13
Ttc39a-203ENSMUST00000106619 Cdc42bpbQ7TT50 1713 aa28.33■■■□□ 2.13
Ttc39a-203ENSMUST00000106619 Ttc37F8VPK0 1563 aa28.31■■■□□ 2.12
Ttc39a-203ENSMUST00000106619 Depdc5P61460 1591 aa28.3■■■□□ 2.12
Ttc39a-203ENSMUST00000106619 Ttbk1Q6PCN3 1308 aa28.3■■■□□ 2.12
Ttc39a-203ENSMUST00000106619 Ppp1r18Q8BQ30 594 aa28.28■■■□□ 2.12
Ttc39a-203ENSMUST00000106619 Ube2uB1AUC4 352 aa28.27■■■□□ 2.12
Ttc39a-203ENSMUST00000106619 Ankrd36D3Z4K0 1415 aa28.27■■■□□ 2.12
Ttc39a-203ENSMUST00000106619 AlkP97793 1621 aa28.27■■■□□ 2.12
Ttc39a-203ENSMUST00000106619 Prdm16A2A935 1275 aa28.24■■■□□ 2.11
Ttc39a-203ENSMUST00000106619 Lemd3Q9WU40 921 aa28.24■■■□□ 2.11
Ttc39a-203ENSMUST00000106619 Rrp7aQ9D1C9 280 aaKnown RBP28.23■■■□□ 2.11
Ttc39a-203ENSMUST00000106619 Zfp644E9QA22 1323 aa28.19■■■□□ 2.1
Ttc39a-203ENSMUST00000106619 OvosQ3UU35 1456 aa28.18■■■□□ 2.1
Ttc39a-203ENSMUST00000106619 Dnajc5P60904 198 aa28.18■■■□□ 2.1
Ttc39a-203ENSMUST00000106619 Eid3Q3V124 375 aa28.18■■■□□ 2.1
Ttc39a-203ENSMUST00000106619 Trpm2Q91YD4 1506 aa28.18■■■□□ 2.1
Ttc39a-203ENSMUST00000106619 Ssh2Q5SW75 1423 aa28.18■■■□□ 2.1
Ttc39a-203ENSMUST00000106619 Kdm5cP41230 1554 aa28.16■■■□□ 2.1
Ttc39a-203ENSMUST00000106619 Kiaa0556Q8C753 1610 aa28.15■■■□□ 2.1
Ttc39a-203ENSMUST00000106619 Mphosph9A6H5Y1 991 aa28.14■■■□□ 2.1
Ttc39a-203ENSMUST00000106619 Lamc1P02468 1607 aaKnown RBP28.14■■■□□ 2.1
Ttc39a-203ENSMUST00000106619 Map3k5O35099 1380 aa28.13■■■□□ 2.09
Ttc39a-203ENSMUST00000106619 Nos1Q9Z0J4 1429 aa28.11■■■□□ 2.09
Ttc39a-203ENSMUST00000106619 Nup155Q99P88 1391 aaKnown RBP28.09■■■□□ 2.09
Ttc39a-203ENSMUST00000106619 Atp10aO54827 1508 aa28.09■■■□□ 2.09
Ttc39a-203ENSMUST00000106619 AdgbG3UZ78 1657 aa28.08■■■□□ 2.09
Ttc39a-203ENSMUST00000106619 TonslQ6NZL6 1363 aa28.06■■■□□ 2.08
Ttc39a-203ENSMUST00000106619 Kif21bQ9QXL1 1668 aa28.06■■■□□ 2.08
Ttc39a-203ENSMUST00000106619 Spag9Q58A65 1321 aaKnown RBP28.06■■■□□ 2.08
Ttc39a-203ENSMUST00000106619 Abca17E9PX95 1733 aa28.05■■■□□ 2.08
Ttc39a-203ENSMUST00000106619 Xrn1P97789 1719 aaKnown RBP28.05■■■□□ 2.08
Ttc39a-203ENSMUST00000106619 Clstn2Q9ER65 966 aa28.03■■■□□ 2.08
Ttc39a-203ENSMUST00000106619 Ttll5Q8CHB8 1328 aa28.02■■■□□ 2.08
Ttc39a-203ENSMUST00000106619 Map4P27546 1125 aaKnown RBP28.01■■■□□ 2.07
Ttc39a-203ENSMUST00000106619 Supt6hQ62383 1726 aaKnown RBP27.99■■■□□ 2.07
Ttc39a-203ENSMUST00000106619 Ptch1Q61115 1434 aa27.98■■■□□ 2.07
Ttc39a-203ENSMUST00000106619 Znf518aB2RRF6 1478 aaKnown RBP27.98■■■□□ 2.07
Ttc39a-203ENSMUST00000106619 Synj2Q9D2G5 1434 aa27.98■■■□□ 2.07
Ttc39a-203ENSMUST00000106619 Usp54Q8BL06 1588 aaKnown RBP27.98■■■□□ 2.07
Ttc39a-203ENSMUST00000106619 Dip2cE9PWR4 1557 aa27.96■■■□□ 2.07
Ttc39a-203ENSMUST00000106619 RereQ80TZ9 1558 aa27.96■■■□□ 2.07
Ttc39a-203ENSMUST00000106619 Fndc1E9Q043 1732 aa27.94■■■□□ 2.06
Ttc39a-203ENSMUST00000106619 Hecw2Q6I6G8 1578 aa27.94■■■□□ 2.06
Ttc39a-203ENSMUST00000106619 PtprgQ05909 1442 aa27.93■■■□□ 2.06
Ttc39a-203ENSMUST00000106619 Pkd2O35245 966 aa27.93■■■□□ 2.06
Ttc39a-203ENSMUST00000106619 Asxl1P59598 1514 aa27.92■■■□□ 2.06
Retrieved 100 of 22,080 RNA–protein pairs in 67.6 ms