RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Fam13bQ8K2H3 851 aa20.69■□□□□ 0.9
Col17a1-202ENSMUST00000086923 Pak3Q61036 559 aa20.68■□□□□ 0.9
Col17a1-202ENSMUST00000086923 DmtnQ9WV69 405 aa20.68■□□□□ 0.9
Col17a1-202ENSMUST00000086923 PnnO35691 725 aaKnown RBP20.68■□□□□ 0.9
Col17a1-202ENSMUST00000086923 Brd4Q9ESU6 1400 aaKnown RBP20.67■□□□□ 0.9
Col17a1-202ENSMUST00000086923 Znf771Q8BJ90 317 aa20.67■□□□□ 0.9
Col17a1-202ENSMUST00000086923 Hspa5P20029 655 aaKnown RBP20.64■□□□□ 0.9
Col17a1-202ENSMUST00000086923 Chmp4bQ9D8B3 224 aaKnown RBP20.64■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Cald1E9QA15 768 aaKnown RBP20.64■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Hsp90b1P08113 802 aaKnown RBP20.63■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Sin3aQ60520 1274 aaKnown RBP20.63■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Taf3Q5HZG4 932 aa20.62■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Mrvi1Q9WUX5 899 aaKnown RBP20.62■□□□□ 0.89
Col17a1-202ENSMUST00000086923 MccE9PWI3 1003 aa20.62■□□□□ 0.89
Col17a1-202ENSMUST00000086923 NudcO35685 332 aaKnown RBP20.62■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Cspp1B2RX88 1205 aa20.61■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Rsph3aQ3UFY4 516 aa20.61■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Grwd1Q810D6 446 aaKnown RBP20.6■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Phf14Q9D4H9 881 aa20.6■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Tomm22Q9CPQ3 142 aa20.58■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Iqcf3Q9D498 203 aa20.57■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Eif2s2Q99L45 331 aaKnown RBP20.57■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Setd5Q5XJV7 1441 aa20.57■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Gm13695A2AK44 830 aa20.57■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Fhad1A6PWD2 1420 aa20.57■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Samd1D3YXK1 519 aa20.55■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Vgll3P85442 326 aa20.54■□□□□ 0.88
Col17a1-202ENSMUST00000086923 CntlnA2AM05 1397 aa20.54■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Cluap1Q8R3P7 413 aa20.53■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Mia2Q91ZV0 1396 aa20.53■□□□□ 0.88
Col17a1-202ENSMUST00000086923 GorabQ8BRM2 368 aa20.52■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Zscan21Q07231 555 aa20.52■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Pnmal2G3X9N3 661 aa20.52■□□□□ 0.88
Col17a1-202ENSMUST00000086923 CalrP14211 416 aaKnown RBP20.51■□□□□ 0.87
Col17a1-202ENSMUST00000086923 CgnP59242 1191 aa20.51■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Speer4f1Q9D5Q6 258 aa20.51■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Znf710Q3U288 666 aa20.5■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Paxip1Q6NZQ4 1056 aa20.49■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Kif3aP28741 701 aa20.49■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Ralbp1Q62172 648 aa20.47■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Pes1Q9EQ61 584 aaKnown RBP20.47■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Anp32eP97822 260 aaKnown RBP20.46■□□□□ 0.87
Col17a1-202ENSMUST00000086923 AcrbpQ3V140 540 aa20.46■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Ak7Q9D2H2 614 aa20.46■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Clstn2Q9ER65 966 aa20.45■□□□□ 0.86
Col17a1-202ENSMUST00000086923 Smg6P61406 1418 aaKnown RBP20.44■□□□□ 0.86
Col17a1-202ENSMUST00000086923 HnrnpuQ8VEK3 800 aaKnown RBP20.42■□□□□ 0.86
Col17a1-202ENSMUST00000086923 AampJ3QN89 436 aa20.4■□□□□ 0.86
Col17a1-202ENSMUST00000086923 Tpd52l1O54818 204 aa20.4■□□□□ 0.86
Col17a1-202ENSMUST00000086923 Dusp27Q148W8 1138 aa20.4■□□□□ 0.86
Col17a1-202ENSMUST00000086923 Glipr1l2Q9CQ35 332 aa20.4■□□□□ 0.86
Col17a1-202ENSMUST00000086923 Rfx1P48377 963 aa20.39■□□□□ 0.86
Col17a1-202ENSMUST00000086923 Sf3a1Q8K4Z5 791 aaKnown RBP20.39■□□□□ 0.86
Col17a1-202ENSMUST00000086923 Pdia4P08003 638 aaKnown RBP20.39■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Dusp9Q7TNL7 452 aa20.39■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Cwc15Q9JHS9 229 aaKnown RBP20.39■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Ylpm1Q9R0I7 1386 aaKnown RBP20.38■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Kif20aP97329 887 aa20.37■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Ccdc34Q3UI66 367 aa20.35■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Utp3Q9JI13 469 aaKnown RBP20.35■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Ftsj3Q9DBE9 838 aaKnown RBP20.34■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Casq1O09165 405 aa20.34■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Gripap1Q8VD04 806 aa20.34■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Irx6Q9ER75 438 aa20.33■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Eea1Q8BL66 1411 aa20.32■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Rabep1O35551 862 aa20.32■□□□□ 0.84
Col17a1-202ENSMUST00000086923 CrebrfQ8CDG5 640 aaKnown RBP20.32■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Atp6v1dP57746 247 aa20.32■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Kif4P33174 1231 aa20.31■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Kdm2aP59997 1161 aa20.31■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Ccdc173A0JLY1 547 aa20.31■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Ubl4bQ9CQ84 188 aa20.3■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Smarce1O54941 411 aaKnown RBP20.3■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Fkbp15Q6P9Q6 1216 aaKnown RBP20.3■□□□□ 0.84
Col17a1-202ENSMUST00000086923 CrbnQ8C7D2 445 aa20.3■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Rb1cc1Q9ESK9 1588 aa20.3■□□□□ 0.84
Col17a1-202ENSMUST00000086923 R3hcc1Q8BSI6 488 aa20.29■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Ubap1lG3UW59 384 aa20.29■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Dixdc1Q80Y83 711 aa20.29■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Ttll13A4Q9F6 804 aa20.28■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Zrsr2Q62377 462 aaKnown RBP20.28■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Iffo2Q8R2V2 512 aa20.27■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Fez1Q8K0X8 392 aa20.27■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Rundc1Q0VDN7 615 aa20.26■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Rsf1E9PWW9 1441 aaKnown RBP20.26■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Znf526Q8BI66 675 aa20.26■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Tpm3-rs7D3Z2H9 248 aa20.26■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Tpm3P21107 285 aaKnown RBP20.26■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Drc7Q6V3W6 876 aa20.26■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Trim55G3X8Y1 545 aa20.25■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Anapc15P60007 132 aa20.25■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Washc2Q6PGL7 1334 aa20.25■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Sh3bp5Q9Z131 463 aa20.25■□□□□ 0.83
Col17a1-202ENSMUST00000086923 EzrP26040 586 aaKnown RBP20.25■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Isy1Q69ZQ2 285 aaKnown RBP20.25■□□□□ 0.83
Col17a1-202ENSMUST00000086923 1700019A02RikA0A087WPV9 146 aa20.24■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Rnf214Q8BFU3 668 aaKnown RBP20.24■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Aebp1Q640N1 1128 aa20.24■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Znf330Q922H9 316 aa20.23■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Prkrip1Q9CWV6 186 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 74.6 ms