RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Fam13bQ8K2H3 851 aa20.69■□□□□ 0.9
Col17a1-202ENSMUST00000086923 Pak3Q61036 559 aa20.68■□□□□ 0.9
Col17a1-202ENSMUST00000086923 DmtnQ9WV69 405 aa20.68■□□□□ 0.9
Col17a1-202ENSMUST00000086923 PnnO35691 725 aaKnown RBP20.68■□□□□ 0.9
Col17a1-202ENSMUST00000086923 Brd4Q9ESU6 1400 aaKnown RBP20.67■□□□□ 0.9
Col17a1-202ENSMUST00000086923 Znf771Q8BJ90 317 aa20.67■□□□□ 0.9
Col17a1-202ENSMUST00000086923 Hspa5P20029 655 aaKnown RBP20.64■□□□□ 0.9
Col17a1-202ENSMUST00000086923 Chmp4bQ9D8B3 224 aaKnown RBP20.64■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Cald1E9QA15 768 aaKnown RBP20.64■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Hsp90b1P08113 802 aaKnown RBP20.63■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Sin3aQ60520 1274 aaKnown RBP20.63■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Taf3Q5HZG4 932 aa20.62■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Mrvi1Q9WUX5 899 aaKnown RBP20.62■□□□□ 0.89
Col17a1-202ENSMUST00000086923 MccE9PWI3 1003 aa20.62■□□□□ 0.89
Col17a1-202ENSMUST00000086923 NudcO35685 332 aaKnown RBP20.62■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Cspp1B2RX88 1205 aa20.61■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Rsph3aQ3UFY4 516 aa20.61■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Grwd1Q810D6 446 aaKnown RBP20.6■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Phf14Q9D4H9 881 aa20.6■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Tomm22Q9CPQ3 142 aa20.58■□□□□ 0.89
Col17a1-202ENSMUST00000086923 Iqcf3Q9D498 203 aa20.57■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Eif2s2Q99L45 331 aaKnown RBP20.57■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Setd5Q5XJV7 1441 aa20.57■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Gm13695A2AK44 830 aa20.57■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Fhad1A6PWD2 1420 aa20.57■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Samd1D3YXK1 519 aa20.55■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Vgll3P85442 326 aa20.54■□□□□ 0.88
Col17a1-202ENSMUST00000086923 CntlnA2AM05 1397 aa20.54■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Cluap1Q8R3P7 413 aa20.53■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Mia2Q91ZV0 1396 aa20.53■□□□□ 0.88
Col17a1-202ENSMUST00000086923 GorabQ8BRM2 368 aa20.52■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Zscan21Q07231 555 aa20.52■□□□□ 0.88
Col17a1-202ENSMUST00000086923 Pnmal2G3X9N3 661 aa20.52■□□□□ 0.88
Col17a1-202ENSMUST00000086923 CalrP14211 416 aaKnown RBP20.51■□□□□ 0.87
Col17a1-202ENSMUST00000086923 CgnP59242 1191 aa20.51■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Speer4f1Q9D5Q6 258 aa20.51■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Znf710Q3U288 666 aa20.5■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Paxip1Q6NZQ4 1056 aa20.49■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Kif3aP28741 701 aa20.49■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Ralbp1Q62172 648 aa20.47■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Pes1Q9EQ61 584 aaKnown RBP20.47■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Anp32eP97822 260 aaKnown RBP20.46■□□□□ 0.87
Col17a1-202ENSMUST00000086923 AcrbpQ3V140 540 aa20.46■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Ak7Q9D2H2 614 aa20.46■□□□□ 0.87
Col17a1-202ENSMUST00000086923 Clstn2Q9ER65 966 aa20.45■□□□□ 0.86
Col17a1-202ENSMUST00000086923 Smg6P61406 1418 aaKnown RBP20.44■□□□□ 0.86
Col17a1-202ENSMUST00000086923 HnrnpuQ8VEK3 800 aaKnown RBP20.42■□□□□ 0.86
Col17a1-202ENSMUST00000086923 AampJ3QN89 436 aa20.4■□□□□ 0.86
Col17a1-202ENSMUST00000086923 Tpd52l1O54818 204 aa20.4■□□□□ 0.86
Col17a1-202ENSMUST00000086923 Dusp27Q148W8 1138 aa20.4■□□□□ 0.86
Col17a1-202ENSMUST00000086923 Glipr1l2Q9CQ35 332 aa20.4■□□□□ 0.86
Col17a1-202ENSMUST00000086923 Rfx1P48377 963 aa20.39■□□□□ 0.86
Col17a1-202ENSMUST00000086923 Sf3a1Q8K4Z5 791 aaKnown RBP20.39■□□□□ 0.86
Col17a1-202ENSMUST00000086923 Pdia4P08003 638 aaKnown RBP20.39■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Dusp9Q7TNL7 452 aa20.39■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Cwc15Q9JHS9 229 aaKnown RBP20.39■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Ylpm1Q9R0I7 1386 aaKnown RBP20.38■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Kif20aP97329 887 aa20.37■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Ccdc34Q3UI66 367 aa20.35■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Utp3Q9JI13 469 aaKnown RBP20.35■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Ftsj3Q9DBE9 838 aaKnown RBP20.34■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Casq1O09165 405 aa20.34■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Gripap1Q8VD04 806 aa20.34■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Irx6Q9ER75 438 aa20.33■□□□□ 0.85
Col17a1-202ENSMUST00000086923 Eea1Q8BL66 1411 aa20.32■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Rabep1O35551 862 aa20.32■□□□□ 0.84
Col17a1-202ENSMUST00000086923 CrebrfQ8CDG5 640 aaKnown RBP20.32■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Atp6v1dP57746 247 aa20.32■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Kif4P33174 1231 aa20.31■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Kdm2aP59997 1161 aa20.31■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Ccdc173A0JLY1 547 aa20.31■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Ubl4bQ9CQ84 188 aa20.3■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Smarce1O54941 411 aaKnown RBP20.3■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Fkbp15Q6P9Q6 1216 aaKnown RBP20.3■□□□□ 0.84
Col17a1-202ENSMUST00000086923 CrbnQ8C7D2 445 aa20.3■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Rb1cc1Q9ESK9 1588 aa20.3■□□□□ 0.84
Col17a1-202ENSMUST00000086923 R3hcc1Q8BSI6 488 aa20.29■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Ubap1lG3UW59 384 aa20.29■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Dixdc1Q80Y83 711 aa20.29■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Ttll13A4Q9F6 804 aa20.28■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Zrsr2Q62377 462 aaKnown RBP20.28■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Iffo2Q8R2V2 512 aa20.27■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Fez1Q8K0X8 392 aa20.27■□□□□ 0.84
Col17a1-202ENSMUST00000086923 Rundc1Q0VDN7 615 aa20.26■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Rsf1E9PWW9 1441 aaKnown RBP20.26■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Znf526Q8BI66 675 aa20.26■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Tpm3-rs7D3Z2H9 248 aa20.26■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Tpm3P21107 285 aaKnown RBP20.26■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Drc7Q6V3W6 876 aa20.26■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Trim55G3X8Y1 545 aa20.25■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Anapc15P60007 132 aa20.25■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Washc2Q6PGL7 1334 aa20.25■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Sh3bp5Q9Z131 463 aa20.25■□□□□ 0.83
Col17a1-202ENSMUST00000086923 EzrP26040 586 aaKnown RBP20.25■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Isy1Q69ZQ2 285 aaKnown RBP20.25■□□□□ 0.83
Col17a1-202ENSMUST00000086923 1700019A02RikA0A087WPV9 146 aa20.24■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Rnf214Q8BFU3 668 aaKnown RBP20.24■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Aebp1Q640N1 1128 aa20.24■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Znf330Q922H9 316 aa20.23■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Prkrip1Q9CWV6 186 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms