RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W RPT4P53549 437 aaKnown RBP3.13□□□□□ -1.91
MSH2YOL090W IPI3P53877 555 aa3.13□□□□□ -1.91
MSH2YOL090W BUD22Q04347 519 aaKnown RBP3.13□□□□□ -1.91
MSH2YOL090W ARR1Q06596 294 aa3.13□□□□□ -1.91
MSH2YOL090W SIL1Q08199 421 aa3.13□□□□□ -1.91
MSH2YOL090W FRE3Q08905 711 aa3.13□□□□□ -1.91
MSH2YOL090W LPX1Q12405 387 aaKnown RBP3.13□□□□□ -1.91
MSH2YOL090W YLR278CQ05854 1341 aa3.12□□□□□ -1.91
MSH2YOL090W JIP3O13555 125 aa3.12□□□□□ -1.91
MSH2YOL090W HXK2P04807 486 aaKnown RBP3.12□□□□□ -1.91
MSH2YOL090W SEC62P21825 274 aa3.12□□□□□ -1.91
MSH2YOL090W DSS4P32601 143 aa3.12□□□□□ -1.91
MSH2YOL090W MGM101P32787 269 aaKnown RBP3.12□□□□□ -1.91
MSH2YOL090W UGP1P32861 499 aaKnown RBP3.12□□□□□ -1.91
MSH2YOL090W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
MSH2YOL090W BZZ1P38822 633 aa3.12□□□□□ -1.91
MSH2YOL090W MND2P40577 368 aa3.12□□□□□ -1.91
MSH2YOL090W TOM22P49334 152 aa3.12□□□□□ -1.91
MSH2YOL090W MPS2P53159 387 aa3.12□□□□□ -1.91
MSH2YOL090W MTL1P53214 551 aa3.12□□□□□ -1.91
MSH2YOL090W YGR054WP53235 642 aaKnown RBP3.12□□□□□ -1.91
MSH2YOL090W FIN1Q03898 291 aa3.12□□□□□ -1.91
MSH2YOL090W YOL159CQ08300 171 aa3.12□□□□□ -1.91
MSH2YOL090W FMP40Q08968 688 aaPredicted RBP3.12□□□□□ -1.91
MSH2YOL090W YOR012WQ12351 137 aa3.12□□□□□ -1.91
MSH2YOL090W NBL1Q3E7Y6 73 aa3.12□□□□□ -1.91
MSH2YOL090W DFG16Q99234 619 aa3.12□□□□□ -1.91
MSH2YOL090W RAD61Q99359 647 aa3.12□□□□□ -1.91
MSH2YOL090W FKS3Q04952 1785 aa3.12□□□□□ -1.91
MSH2YOL090W SRP54P20424 541 aaKnown RBP3.12□□□□□ -1.91
MSH2YOL090W RDS1P25611 832 aa3.12□□□□□ -1.91
MSH2YOL090W FEN2P25621 512 aaKnown RBP3.12□□□□□ -1.91
MSH2YOL090W AIM26P32858 118 aa3.12□□□□□ -1.91
MSH2YOL090W GLG1P36143 616 aa3.12□□□□□ -1.91
MSH2YOL090W ATP3P38077 311 aaKnown RBP3.12□□□□□ -1.91
MSH2YOL090W ZTA1P38230 334 aaKnown RBP3.12□□□□□ -1.91
MSH2YOL090W AFG3P39925 761 aa3.12□□□□□ -1.91
MSH2YOL090W IRC8P47046 822 aa3.12□□□□□ -1.91
MSH2YOL090W RMD9P53140 646 aaKnown RBP3.12□□□□□ -1.91
MSH2YOL090W PIB2P53191 635 aa3.12□□□□□ -1.91
MSH2YOL090W YGR079WP53249 370 aa3.12□□□□□ -1.91
MSH2YOL090W FHN1P53279 174 aa3.12□□□□□ -1.91
MSH2YOL090W SNZ1Q03148 297 aa3.12□□□□□ -1.91
MSH2YOL090W URC2Q04411 772 aa3.12□□□□□ -1.91
MSH2YOL090W YFH1Q07540 174 aa3.12□□□□□ -1.91
MSH2YOL090W YLL007CQ07799 665 aa3.12□□□□□ -1.91
MSH2YOL090W TAF3Q12297 353 aa3.12□□□□□ -1.91
MSH2YOL090W NTO1Q12311 748 aa3.12□□□□□ -1.91
MSH2YOL090W GIS3Q12418 502 aa3.12□□□□□ -1.91
MSH2YOL090W YDL007C-AQ2V2Q0 85 aa3.12□□□□□ -1.91
MSH2YOL090W CDC6P09119 513 aa3.11□□□□□ -1.91
MSH2YOL090W CLN1P20437 546 aa3.11□□□□□ -1.91
MSH2YOL090W VPS34P22543 875 aa3.11□□□□□ -1.91
MSH2YOL090W PEX1P24004 1043 aa3.11□□□□□ -1.91
MSH2YOL090W EMC1P25574 760 aa3.11□□□□□ -1.91
MSH2YOL090W PTK1P36002 662 aaPredicted RBP3.11□□□□□ -1.91
MSH2YOL090W ASC1P38011 319 aaKnown RBP3.11□□□□□ -1.91
MSH2YOL090W MNL1P38888 796 aa3.11□□□□□ -1.91
MSH2YOL090W LIA1P47120 325 aaKnown RBP3.11□□□□□ -1.91
MSH2YOL090W MCM6P53091 1017 aaKnown RBP3.11□□□□□ -1.91
MSH2YOL090W MPP6P53725 186 aaPredicted RBP3.11□□□□□ -1.91
MSH2YOL090W PDS5Q04264 1277 aa3.11□□□□□ -1.91
MSH2YOL090W CRN1Q06440 651 aa3.11□□□□□ -1.91
MSH2YOL090W GEP3Q08622 556 aa3.11□□□□□ -1.91
MSH2YOL090W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
MSH2YOL090W YRM1Q12340 786 aa3.11□□□□□ -1.91
MSH2YOL090W YML133CQ03099 1374 aa3.11□□□□□ -1.91
MSH2YOL090W YLL067CQ07888 1374 aa3.11□□□□□ -1.91
MSH2YOL090W ILV2P07342 687 aaKnown RBP3.11□□□□□ -1.91
MSH2YOL090W SEC12P11655 471 aa3.11□□□□□ -1.91
MSH2YOL090W PCT1P13259 424 aa3.11□□□□□ -1.91
MSH2YOL090W CHS2P14180 963 aa3.11□□□□□ -1.91
MSH2YOL090W URA4P20051 364 aa3.11□□□□□ -1.91
MSH2YOL090W VPS3P23643 1011 aa3.11□□□□□ -1.91
MSH2YOL090W NDI1P32340 513 aa3.11□□□□□ -1.91
MSH2YOL090W CIN1P40987 1014 aa3.11□□□□□ -1.91
MSH2YOL090W FKH2P41813 862 aa3.11□□□□□ -1.91
MSH2YOL090W COS5P47187 383 aa3.11□□□□□ -1.91
MSH2YOL090W EFM6P53970 246 aa3.11□□□□□ -1.91
MSH2YOL090W YAT1P80235 687 aa3.11□□□□□ -1.91
MSH2YOL090W PLB2Q03674 706 aa3.11□□□□□ -1.91
MSH2YOL090W YMR160WQ03823 816 aa3.11□□□□□ -1.91
MSH2YOL090W CSI1Q04368 295 aa3.11□□□□□ -1.91
MSH2YOL090W ATG23Q06671 453 aa3.11□□□□□ -1.91
MSH2YOL090W COS7Q07788 383 aa3.11□□□□□ -1.91
MSH2YOL090W THI72Q08579 599 aa3.11□□□□□ -1.91
MSH2YOL090W YIL002W-AQ3E7Z5 69 aa3.11□□□□□ -1.91
MSH2YOL090W ILV5P06168 395 aaKnown RBP3.1□□□□□ -1.91
MSH2YOL090W YCL068CP25593 260 aa3.1□□□□□ -1.91
MSH2YOL090W EFB1P32471 206 aaKnown RBP3.1□□□□□ -1.91
MSH2YOL090W BCS1P32839 456 aa3.1□□□□□ -1.91
MSH2YOL090W AGP2P38090 596 aa3.1□□□□□ -1.91
MSH2YOL090W VHS2P40463 436 aa3.1□□□□□ -1.91
MSH2YOL090W YJL107CP42947 387 aa3.1□□□□□ -1.91
MSH2YOL090W COP1P53622 1201 aaKnown RBP3.1□□□□□ -1.91
MSH2YOL090W YNL134CP53912 376 aaKnown RBP3.1□□□□□ -1.91
MSH2YOL090W SKO1Q02100 647 aa3.1□□□□□ -1.91
MSH2YOL090W SPO19Q03029 223 aa3.1□□□□□ -1.91
MSH2YOL090W COQ9Q05779 260 aa3.1□□□□□ -1.91
MSH2YOL090W NDL1Q06568 189 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms