RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W MZM1Q03429 123 aaPredicted RBP3.75□□□□□ -1.81
ECM16YMR128W TAF12Q03761 539 aa3.75□□□□□ -1.81
ECM16YMR128W YDR131CQ03899 556 aa3.75□□□□□ -1.81
ECM16YMR128W EAF1Q06337 982 aa3.75□□□□□ -1.81
ECM16YMR128W SGT1Q08446 395 aa3.75□□□□□ -1.81
ECM16YMR128W TPK1P06244 397 aa3.75□□□□□ -1.81
ECM16YMR128W NFT1P0CE68 1218 aa3.75□□□□□ -1.81
ECM16YMR128W MRP13P12686 339 aa3.75□□□□□ -1.81
ECM16YMR128W ATP12P22135 325 aa3.75□□□□□ -1.81
ECM16YMR128W YUR1P26725 428 aa3.75□□□□□ -1.81
ECM16YMR128W PTM1P32857 523 aa3.75□□□□□ -1.81
ECM16YMR128W MTC2P34246 357 aa3.75□□□□□ -1.81
ECM16YMR128W YMC2P38087 329 aa3.75□□□□□ -1.81
ECM16YMR128W FLR1P38124 548 aa3.75□□□□□ -1.81
ECM16YMR128W BIT2P38346 545 aa3.75□□□□□ -1.81
ECM16YMR128W MET18P40469 1032 aa3.75□□□□□ -1.81
ECM16YMR128W CCT7P42943 550 aaKnown RBP3.75□□□□□ -1.81
ECM16YMR128W YFL066CP43538 392 aa3.75□□□□□ -1.81
ECM16YMR128W FAR7P43592 221 aa3.75□□□□□ -1.81
ECM16YMR128W CWC23P52868 283 aaPredicted RBP3.75□□□□□ -1.81
ECM16YMR128W KTR6P54070 446 aa3.75□□□□□ -1.81
ECM16YMR128W CRF1Q04930 467 aa3.75□□□□□ -1.81
ECM16YMR128W ECM7Q06200 448 aa3.75□□□□□ -1.81
ECM16YMR128W TRE2Q08693 809 aa3.75□□□□□ -1.81
ECM16YMR128W SAM4Q08985 325 aaKnown RBP3.75□□□□□ -1.81
ECM16YMR128W MDY2Q12285 212 aa3.75□□□□□ -1.81
ECM16YMR128W SRF1Q12516 437 aa3.75□□□□□ -1.81
ECM16YMR128W CSR2Q12734 1121 aa3.75□□□□□ -1.81
ECM16YMR128W SGF29P25554 259 aa3.74□□□□□ -1.81
ECM16YMR128W ECM8P38246 354 aa3.74□□□□□ -1.81
ECM16YMR128W YBR259WP38338 688 aa3.74□□□□□ -1.81
ECM16YMR128W SHC1P39000 512 aa3.74□□□□□ -1.81
ECM16YMR128W MPT5P39016 859 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
ECM16YMR128W COA1P40452 197 aa3.74□□□□□ -1.81
ECM16YMR128W ARF3P40994 183 aaRIP-Chip data3.74□□□□□ -1.81not detected
ECM16YMR128W TWF1P53250 332 aa3.74□□□□□ -1.81
ECM16YMR128W HEH2Q03281 663 aa3.74□□□□□ -1.81
ECM16YMR128W RMD5Q12508 421 aa3.74□□□□□ -1.81
ECM16YMR128W COX5AP00424 153 aa3.74□□□□□ -1.81
ECM16YMR128W CDC9P04819 755 aa3.74□□□□□ -1.81
ECM16YMR128W TPK3P05986 398 aa3.74□□□□□ -1.81
ECM16YMR128W HMG2P12684 1045 aa3.74□□□□□ -1.81
ECM16YMR128W GRX2P17695 143 aaKnown RBP3.74□□□□□ -1.81
ECM16YMR128W BUB2P26448 306 aaPredicted RBP3.74□□□□□ -1.81
ECM16YMR128W HIR2P32480 875 aa3.74□□□□□ -1.81
ECM16YMR128W SDH3P33421 198 aa3.74□□□□□ -1.81
ECM16YMR128W CLG1P35190 452 aa3.74□□□□□ -1.81
ECM16YMR128W NAB3P38996 802 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
ECM16YMR128W RGA1P39083 1007 aa3.74□□□□□ -1.81
ECM16YMR128W MET12P46151 657 aa3.74□□□□□ -1.81
ECM16YMR128W UGO1Q03327 502 aa3.74□□□□□ -1.81
ECM16YMR128W FIN1Q03898 291 aa3.74□□□□□ -1.81
ECM16YMR128W GPI11Q06636 219 aa3.74□□□□□ -1.81
ECM16YMR128W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
ECM16YMR128W CTF3Q12748 733 aa3.74□□□□□ -1.81
ECM16YMR128W GPM1P00950 247 aaKnown RBP3.74□□□□□ -1.81
ECM16YMR128W LRE1P25579 583 aaKnown RBP3.74□□□□□ -1.81
ECM16YMR128W BRF1P29056 596 aa3.74□□□□□ -1.81
ECM16YMR128W ARO7P32178 256 aa3.74□□□□□ -1.81
ECM16YMR128W VMA6P32366 345 aaKnown RBP3.74□□□□□ -1.81
ECM16YMR128W NOP4P37838 685 aaKnown RBP3.74□□□□□ -1.81
ECM16YMR128W TSL1P38427 1098 aaKnown RBP3.74□□□□□ -1.81
ECM16YMR128W YHR218WP38899 603 aa3.74□□□□□ -1.81
ECM16YMR128W MTW1P39731 289 aa3.74□□□□□ -1.81
ECM16YMR128W IMA5P40884 581 aa3.74□□□□□ -1.81
ECM16YMR128W RPS10BP46784 105 aaKnown RBP3.74□□□□□ -1.81
ECM16YMR128W STP1Q00947 519 aa3.74□□□□□ -1.81
ECM16YMR128W RPS10AQ08745 105 aaPredicted RBP3.74□□□□□ -1.81
ECM16YMR128W HER1Q12276 1246 aa3.74□□□□□ -1.81
ECM16YMR128W YPK1P12688 680 aaKnown RBP3.73□□□□□ -1.81
ECM16YMR128W AMD1P15274 810 aaKnown RBP3.73□□□□□ -1.81
ECM16YMR128W RHB1P25378 209 aa3.73□□□□□ -1.81
ECM16YMR128W CIN8P27895 1000 aa3.73□□□□□ -1.81
ECM16YMR128W CDC12P32468 407 aaKnown RBP3.73□□□□□ -1.81
ECM16YMR128W SMI1P32566 505 aa3.73□□□□□ -1.81
ECM16YMR128W PAH1P32567 862 aa3.73□□□□□ -1.81
ECM16YMR128W MRPL17P36528 281 aa3.73□□□□□ -1.81
ECM16YMR128W IML2P47031 731 aa3.73□□□□□ -1.81
ECM16YMR128W YGR045CP53229 120 aa3.73□□□□□ -1.81
ECM16YMR128W SNF12P53628 566 aa3.73□□□□□ -1.81
ECM16YMR128W YNL095CP53932 642 aa3.73□□□□□ -1.81
ECM16YMR128W SRL4Q03085 281 aa3.73□□□□□ -1.81
ECM16YMR128W ABZ2Q03266 374 aa3.73□□□□□ -1.81
ECM16YMR128W TRS31Q03337 283 aa3.73□□□□□ -1.81
ECM16YMR128W TRM12Q04235 462 aa3.73□□□□□ -1.81
ECM16YMR128W MRH1Q12117 320 aaPredicted RBP3.73□□□□□ -1.81
ECM16YMR128W ENA1P13587 1091 aa3.73□□□□□ -1.81
ECM16YMR128W RSR1P13856 272 aa3.73□□□□□ -1.81
ECM16YMR128W FBA1P14540 359 aaKnown RBP3.73□□□□□ -1.81
ECM16YMR128W SAM35P14693 329 aa3.73□□□□□ -1.81
ECM16YMR128W APE1P14904 514 aa3.73□□□□□ -1.81
ECM16YMR128W GUK1P15454 187 aaKnown RBP3.73□□□□□ -1.81
ECM16YMR128W CSM1P25651 190 aa3.73□□□□□ -1.81
ECM16YMR128W DPH2P32461 534 aa3.73□□□□□ -1.81
ECM16YMR128W YEL020CP39994 560 aa3.73□□□□□ -1.81
ECM16YMR128W VAB2P40003 282 aa3.73□□□□□ -1.81
ECM16YMR128W IMA1P53051 589 aa3.73□□□□□ -1.81
ECM16YMR128W ENA2Q01896 1091 aa3.73□□□□□ -1.81
ECM16YMR128W NGL1Q08213 363 aaKnown RBP3.73□□□□□ -1.81
ECM16YMR128W YLR049CQ12110 428 aa3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms