RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN12, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN12	YFR052W	YJL107C	P42947	387 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	PET130	P47065	347 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	BOL2	P53082	120 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	SGF73	P53165	657 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	CLD1	P53264	445 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	ZRG17	P53735	605 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	CCE1	Q03702	353 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	BNA5	Q05979	453 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	EAF1	Q06337	982 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	YLR053C	Q12026	108 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	APC9	Q12107	265 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	YOR012W	Q12351	137 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	GTT2	Q12390	233 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	YAR066W	P0CX18	203 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	YHR214W	P0CX19	203 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	PRP16	P15938	1071 aa	Predicted RBP	4.93	□□□□□ -1.62
RPN12	YFR052W	ILV6	P25605	309 aa	Known RBP	4.93	□□□□□ -1.62
RPN12	YFR052W	CWP1	P28319	239 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	RIM1	P32445	135 aa	Known RBP	4.93	□□□□□ -1.62
RPN12	YFR052W	NFU1	P32860	256 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	SOL2	P37262	315 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	ARA1	P38115	344 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	PHO89	P38361	574 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	MUP3	P38734	546 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	YHR182W	P38870	785 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	YAL037W	P39728	267 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	SSP120	P39931	234 aa	Known RBP	4.93	□□□□□ -1.62
RPN12	YFR052W	GIM4	P40005	111 aa	Known RBP	4.93	□□□□□ -1.62
RPN12	YFR052W	SSU1	P41930	458 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	YFR020W	P43600	232 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	STB2	P46679	850 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	GCV1	P48015	400 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	YLR177W	Q06251	628 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	YDR056C	Q12025	205 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	KCS1	Q12494	1050 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	YPL247C	Q12523	523 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	RGS2	Q99188	309 aa		4.93	□□□□□ -1.62
RPN12	YFR052W	HRP1	Q99383	534 aa	Known RBP	4.93	□□□□□ -1.62
RPN12	YFR052W	HTS1	P07263	546 aa	Known RBP	4.92	□□□□□ -1.62
RPN12	YFR052W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
RPN12	YFR052W	TRX2	P22803	104 aa	Known RBP	4.92	□□□□□ -1.62
RPN12	YFR052W	MSH1	P25846	959 aa		4.92	□□□□□ -1.62
RPN12	YFR052W	MEI5	P32489	222 aa		4.92	□□□□□ -1.62
RPN12	YFR052W	MGM101	P32787	269 aa	Known RBP	4.92	□□□□□ -1.62
RPN12	YFR052W	NUP120	P35729	1037 aa		4.92	□□□□□ -1.62
RPN12	YFR052W	MRPL37	P36532	105 aa		4.92	□□□□□ -1.62
RPN12	YFR052W	YBR238C	P38330	731 aa	Known RBP	4.92	□□□□□ -1.62
RPN12	YFR052W	HSE1	P38753	452 aa		4.92	□□□□□ -1.62
RPN12	YFR052W	DHH1	P39517	506 aa	Known RBP	4.92	□□□□□ -1.62
RPN12	YFR052W	OAF1	P39720	1047 aa	Predicted RBP	4.92	□□□□□ -1.62
RPN12	YFR052W	CFD1	P40558	293 aa		4.92	□□□□□ -1.62
RPN12	YFR052W	FET5	P43561	622 aa		4.92	□□□□□ -1.62
RPN12	YFR052W	ARE2	P53629	642 aa	Known RBP	4.92	□□□□□ -1.62
RPN12	YFR052W	UBX4	P54730	416 aa		4.92	□□□□□ -1.62
RPN12	YFR052W	EGD1	Q02642	157 aa	Known RBP	4.92	□□□□□ -1.62
RPN12	YFR052W	HPT1	Q04178	221 aa	Known RBP	4.92	□□□□□ -1.62
RPN12	YFR052W	TAF11	Q04226	346 aa		4.92	□□□□□ -1.62
RPN12	YFR052W	STP3	Q05937	343 aa		4.92	□□□□□ -1.62
RPN12	YFR052W	STE23	Q06010	1027 aa		4.92	□□□□□ -1.62
RPN12	YFR052W	SFH1	Q06168	426 aa		4.92	□□□□□ -1.62
RPN12	YFR052W	YLR456W	Q06199	204 aa		4.92	□□□□□ -1.62
RPN12	YFR052W	RRP15	Q06511	250 aa	Predicted RBP	4.92	□□□□□ -1.62
RPN12	YFR052W	MDY2	Q12285	212 aa		4.92	□□□□□ -1.62
RPN12	YFR052W	CLN2	P20438	545 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	AMD2	P22580	549 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	PHA2	P32452	334 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	PET309	P32522	965 aa	Predicted RBP	4.91	□□□□□ -1.62
RPN12	YFR052W	SDH3	P33421	198 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	YPT52	P36018	234 aa	Known RBP	4.91	□□□□□ -1.62
RPN12	YFR052W	RRN3	P36070	627 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	YHR045W	P38775	560 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	YHR127W	P38833	243 aa	Known RBP	4.91	□□□□□ -1.62
RPN12	YFR052W	REV7	P38927	245 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	LYS1	P38998	373 aa	RIP-Chip data	4.91	□□□□□ -1.62	not detected
RPN12	YFR052W	PLB1	P39105	664 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	SPF1	P39986	1215 aa	Known RBP	4.91	□□□□□ -1.62
RPN12	YFR052W	LRO1	P40345	661 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	SEC28	P40509	296 aa	Known RBP	4.91	□□□□□ -1.62
RPN12	YFR052W	PRM2	P40534	656 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	VMA13	P41807	478 aa	Known RBP	4.91	□□□□□ -1.62
RPN12	YFR052W	YRB1	P41920	201 aa	Known RBP	4.91	□□□□□ -1.62
RPN12	YFR052W	AIF1	P52923	378 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	ERG26	P53199	349 aa	Known RBP	4.91	□□□□□ -1.62
RPN12	YFR052W	YMR155W	Q03795	547 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	SPO20	Q04359	397 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	RIF2	Q06208	395 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	GRS2	Q06817	618 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	VAM6	Q07468	1049 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	YDR262W	Q12331	272 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	CSF1	Q12150	2958 aa		4.91	□□□□□ -1.62
RPN12	YFR052W	FAS1	P07149	2051 aa	Known RBP	4.9	□□□□□ -1.62
RPN12	YFR052W	GAL4	P04386	881 aa		4.9	□□□□□ -1.63
RPN12	YFR052W	CUP1-1	P0CX80	61 aa		4.9	□□□□□ -1.63
RPN12	YFR052W	CUP1-2	P0CX81	61 aa		4.9	□□□□□ -1.63
RPN12	YFR052W	KIN2	P13186	1147 aa	Known RBP	4.9	□□□□□ -1.63
RPN12	YFR052W	GUK1	P15454	187 aa	Known RBP	4.9	□□□□□ -1.63
RPN12	YFR052W	ART10	P18634	518 aa	Known RBP	4.9	□□□□□ -1.63
RPN12	YFR052W	RPB4	P20433	221 aa	Predicted RBP	4.9	□□□□□ -1.63
RPN12	YFR052W	MCM5	P29496	775 aa	Known RBP	4.9	□□□□□ -1.63
RPN12	YFR052W	YSC84	P32793	468 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms