RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261C-DYDR261C-D YNL140CP53910 189 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D TEP1P53916 434 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D EEB1Q02891 456 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D YDR476CQ03362 224 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
YDR261C-DYDR261C-D DNL4Q08387 944 aaPredicted RBP4.46□□□□□ -1.7
YDR261C-DYDR261C-D CTI6Q08923 506 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D JLP1Q12358 412 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D Q0144Q9ZZW2 109 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D RPL27AP0C2H6 136 aaKnown RBP4.46□□□□□ -1.7
YDR261C-DYDR261C-D RPL27BP0C2H7 136 aaKnown RBP4.46□□□□□ -1.7
YDR261C-DYDR261C-D UNG1P12887 359 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D COX11P19516 300 aaKnown RBP4.46□□□□□ -1.7
YDR261C-DYDR261C-D EXO70P19658 623 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D YDJ1P25491 409 aaKnown RBP4.46□□□□□ -1.7
YDR261C-DYDR261C-D ADE1P27616 306 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D PEX3P28795 441 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D TRR1P29509 319 aaKnown RBP4.46□□□□□ -1.7
YDR261C-DYDR261C-D HXT3P32466 567 aaKnown RBP4.46□□□□□ -1.7
YDR261C-DYDR261C-D HXT4P32467 576 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D GSH1P32477 678 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D REC114P32841 428 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D RTC2P38279 296 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D RPF1P38805 295 aaKnown RBP4.46□□□□□ -1.7
YDR261C-DYDR261C-D MXR1P40029 184 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D DOT6P40059 670 aaKnown RBP4.46□□□□□ -1.7
YDR261C-DYDR261C-D AGX1P43567 385 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D ARO8P53090 500 aaKnown RBP4.46□□□□□ -1.7
YDR261C-DYDR261C-D KXD1P53158 218 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D ALF1P53904 254 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D RKM2Q03942 479 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D YLR346CQ06139 101 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D SGT1Q08446 395 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D TGL5Q12043 749 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D DAS2Q12084 232 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D GIS3Q12418 502 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D DRS2P39524 1355 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D MET5P47169 1442 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D NUC1P08466 329 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D RAD18P10862 487 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D CWH43P25618 953 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D POP4P38336 279 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D NEM1P38757 446 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D SFB3P38810 929 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D PTP3P40048 928 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D SSY5P47002 699 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D YJL132WP47014 750 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D CSN12P47130 423 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D POP6P53218 158 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D YNR062CP53748 327 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D YNL092WP53934 400 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D FAP7Q12055 197 aaPredicted RBP4.46□□□□□ -1.7
YDR261C-DYDR261C-D TY3A-GQ12173 290 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D TY3A-IQ99219 290 aa4.46□□□□□ -1.7
YDR261C-DYDR261C-D TRM3Q07527 1436 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D CDC6P09119 513 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D MATALPHA2P0CY08 210 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D HMLALPHA2P0CY09 210 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D CKA1P15790 372 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D MDH1P17505 334 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
YDR261C-DYDR261C-D RNR1P21524 888 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D CPR4P25334 318 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D KRE6P32486 720 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D HBS1P32769 611 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D FRE1P32791 686 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D PTM1P32857 523 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D LHP1P33399 275 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D CSG2P35206 410 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D YBR284WP38150 797 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D ERG7P38604 731 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D MSR1P38714 643 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D YHK8P38776 514 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D WSS1P38838 269 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D YER156CP40093 338 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D AIP1P46680 615 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D YNL260CP53846 198 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D SPE3Q12074 293 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D RPL25P04456 142 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D SPS4P09937 338 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D SST2P11972 698 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D CCA1P21269 546 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D ARO7P32178 256 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D NTH1P32356 751 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D NAB2P32505 525 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
YDR261C-DYDR261C-D MUD1P32605 298 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D SUL1P38359 859 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D PHO23P50947 330 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D DIA1P54005 336 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D ENT5Q03769 411 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D ATG13Q06628 738 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D YDR056CQ12025 205 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D SIA1Q12212 622 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D RPP1BP10622 106 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D FUS3P16892 353 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D PUP3P25451 205 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D COX13P32799 129 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D DHH1P39517 506 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D GDI1P39958 451 aaKnown RBP4.45□□□□□ -1.7
YDR261C-DYDR261C-D AGE2P40529 298 aa4.45□□□□□ -1.7
YDR261C-DYDR261C-D YAE1P47118 141 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms