RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 PEX19P40855 299 aa9.7□□□□□ -0.86
GABRB3-216ENST00000628124 EPHB1P54762 984 aa9.7□□□□□ -0.86
GABRB3-216ENST00000628124 LRRC23Q53EV4 343 aaPredicted RBP9.7□□□□□ -0.86
GABRB3-216ENST00000628124 ST13P4Q8IZP2 240 aaPredicted RBP9.7□□□□□ -0.86
GABRB3-216ENST00000628124 PPM1KQ8N3J5 372 aa9.7□□□□□ -0.86
GABRB3-216ENST00000628124 CACTINQ8WUQ7 758 aaKnown RBP9.7□□□□□ -0.86
GABRB3-216ENST00000628124 ANKRD36BP1Q96IX9 119 aa9.7□□□□□ -0.86
GABRB3-216ENST00000628124 NT5C1BQ96P26 610 aa9.7□□□□□ -0.86
GABRB3-216ENST00000628124 CENPKQ9BS16 269 aa9.7□□□□□ -0.86
GABRB3-216ENST00000628124 SGK1O00141 431 aa9.7□□□□□ -0.86
GABRB3-216ENST00000628124 SLC27A2O14975 620 aa9.7□□□□□ -0.86
GABRB3-216ENST00000628124 SERPINI2O75830 405 aa9.7□□□□□ -0.86
GABRB3-216ENST00000628124 KCNA4P22459 653 aa9.7□□□□□ -0.86
GABRB3-216ENST00000628124 PIK3CAP42336 1068 aa9.7□□□□□ -0.86
GABRB3-216ENST00000628124 CCNA1P78396 465 aa9.7□□□□□ -0.86
GABRB3-216ENST00000628124 SLC12A1Q13621 1099 aa9.7□□□□□ -0.86
GABRB3-216ENST00000628124 CNOT10Q9H9A5 744 aaKnown RBP9.7□□□□□ -0.86
GABRB3-216ENST00000628124 SFMBT1Q9UHJ3 866 aa9.7□□□□□ -0.86
GABRB3-216ENST00000628124 MED7O43513 233 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 TAC1P20366 129 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 ITGA6P23229 1130 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 POLGP54098 1239 aaPredicted RBP9.69□□□□□ -0.86
GABRB3-216ENST00000628124 CAPN12Q6ZSI9 719 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 BZW1Q7L1Q6 419 aaKnown RBP9.69□□□□□ -0.86
GABRB3-216ENST00000628124 TRIML2Q8N7C3 387 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 PLBD2Q8NHP8 589 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 SLC38A10Q9HBR0 1119 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 SMCO2A6NFE2 343 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 C11orf95C9JLR9 678 aaPredicted RBP9.69□□□□□ -0.86
GABRB3-216ENST00000628124 POC1B-GALNT4F8VUJ3 575 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 RASGRF2O14827 1237 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 TRPA1O75762 1119 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 FOSP01100 380 aaPredicted RBP9.69□□□□□ -0.86
GABRB3-216ENST00000628124 SPOPLQ6IQ16 392 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 SNX25Q9H3E2 840 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 RUSC2Q8N2Y8 1516 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 SOX5P35711 763 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 NEK2P51955 445 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 MAP3K10Q02779 954 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 CCDC184Q52MB2 194 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 TTBK2Q6IQ55 1244 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 TRIM67Q6ZTA4 783 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 GDAP1Q8TB36 358 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 DISC1Q9NRI5 854 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 BABAM1Q9NWV8 329 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 MROH5Q6ZUA9 1318 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 WDR17Q8IZU2 1322 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 WIZO95785 1651 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 MAP3K5Q99683 1374 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 H3BRJ5 948 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 MT-ND3P03897 115 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 SF3A3Q12874 501 aaKnown RBP eCLIP9.69□□□□□ -0.86
GABRB3-216ENST00000628124 TNNI3KQ59H18 835 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 C1orf228Q6PIY5 440 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 TRIM59Q8IWR1 403 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 RETREG2Q8NC44 543 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 PCDHA12Q9UN75 941 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 FPGT-TNNI3KV9GXZ4 949 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 MORC3Q14149 939 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 PCGF5Q86SE9 256 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 TEX9Q8N6V9 391 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 ABTB1Q969K4 478 aaPredicted RBP9.69□□□□□ -0.86
GABRB3-216ENST00000628124 MRPL47Q9HD33 250 aaKnown RBP9.69□□□□□ -0.86
GABRB3-216ENST00000628124 PANK4Q9NVE7 773 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 SNX5Q9Y5X3 404 aa9.69□□□□□ -0.86
GABRB3-216ENST00000628124 LMNAP02545 664 aaKnown RBP9.68□□□□□ -0.86
GABRB3-216ENST00000628124 KIAA1841Q6NSI8 718 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 TRMT10CQ7L0Y3 403 aaKnown RBP9.68□□□□□ -0.86
GABRB3-216ENST00000628124 DACH2Q96NX9 599 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 BICC1Q9H694 974 aaKnown RBP9.68□□□□□ -0.86
GABRB3-216ENST00000628124 JAG2Q9Y219 1238 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 FLT4P35916 1363 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 ATP1A2P50993 1020 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 IGBP1P78318 339 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 MED21Q13503 144 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 GRAMD4Q6IC98 578 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 DPY19L2Q6NUT2 758 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 OTUB1Q96FW1 271 aaPredicted RBP9.68□□□□□ -0.86
GABRB3-216ENST00000628124 CAPN11Q9UMQ6 739 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.68□□□□□ -0.86
GABRB3-216ENST00000628124 ATP8B1O43520 1251 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 PMLP29590 882 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 PAPOLAP51003 745 aaKnown RBP9.68□□□□□ -0.86
GABRB3-216ENST00000628124 OCRLQ01968 901 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 MYSM1Q5VVJ2 828 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 KAZNQ674X7 775 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 PODNQ7Z5L7 613 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 SESTD1Q86VW0 696 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 NUDCD3Q8IVD9 361 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 SNX19Q92543 992 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 XAGE2Q96GT9 111 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 MMTAG2Q9BU76 263 aaKnown RBP9.68□□□□□ -0.86
GABRB3-216ENST00000628124 ANLNQ9NQW6 1124 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 AATFQ9NY61 560 aaKnown RBP eCLIP9.68□□□□□ -0.86
GABRB3-216ENST00000628124 RNF14Q9UBS8 474 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 SATB2Q9UPW6 733 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 SYCE1LA8MT33 242 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 DLATP10515 647 aaKnown RBP9.68□□□□□ -0.86
GABRB3-216ENST00000628124 PAMP19021 973 aa9.68□□□□□ -0.86
GABRB3-216ENST00000628124 SKOR1P84550 965 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms