RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 MORC3Q14149 939 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 NCAPHQ15003 741 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 FCHSD1Q86WN1 690 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 MRFAP1L1Q96HT8 127 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 DDX25Q9UHL0 483 aaKnown RBP11.2□□□□□ -0.62
VTA1-205ENST00000620996 CTNND2Q9UQB3 1225 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 LAD1O00515 517 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 PLCG1P19174 1290 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 STAT2P52630 851 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 PPP1R18Q6NYC8 613 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 ARHGAP27Q6ZUM4 889 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 GLIS2Q9BZE0 524 aaPredicted RBP11.2□□□□□ -0.62
VTA1-205ENST00000620996 VPS33BQ9H267 617 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 LRWD1Q9UFC0 647 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 POTEMA6NI47 508 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 IKBKBO14920 756 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 DPYDQ12882 1025 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 PRAMEF18Q5VWM3 479 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 GMCL1P1Q8NEA9 526 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 CALML4Q96GE6 196 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 CNOT7Q9UIV1 285 aaKnown RBP11.19□□□□□ -0.62
VTA1-205ENST00000620996 SPDYE3A6NKU9 549 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 E2F4Q16254 413 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 PDXDC2PQ6P474 469 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 FAM177A1Q8N128 213 aaPredicted RBP11.19□□□□□ -0.62
VTA1-205ENST00000620996 ZNF341Q9BYN7 854 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 PRR12Q9ULL5 1215 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 SYNRGQ9UMZ2 1314 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 SPDYE4A6NLX3 237 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 GTPBP6O43824 516 aaPredicted RBP11.19□□□□□ -0.62
VTA1-205ENST00000620996 SSBP05455 408 aaKnown RBP eCLIP11.19□□□□□ -0.62
VTA1-205ENST00000620996 TRIML1Q8N9V2 468 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 GMCL1Q96IK5 515 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 ANO3Q9BYT9 981 aa11.19□□□□□ -0.62
VTA1-205ENST00000620996 CFBP00751 764 aa11.18□□□□□ -0.62
VTA1-205ENST00000620996 RPN1P04843 607 aaKnown RBP11.18□□□□□ -0.62
VTA1-205ENST00000620996 ZNF76P36508 570 aa11.18□□□□□ -0.62
VTA1-205ENST00000620996 SARSP49591 514 aaKnown RBP11.18□□□□□ -0.62
VTA1-205ENST00000620996 KIAA1755Q5JYT7 1200 aa11.18□□□□□ -0.62
VTA1-205ENST00000620996 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.18□□□□□ -0.62
VTA1-205ENST00000620996 DPF2Q92785 391 aa11.18□□□□□ -0.62
VTA1-205ENST00000620996 RAB34Q9BZG1 259 aa11.18□□□□□ -0.62
VTA1-205ENST00000620996 SIPA1L1O43166 1804 aa11.18□□□□□ -0.62
VTA1-205ENST00000620996 PRPHP41219 470 aa11.18□□□□□ -0.62
VTA1-205ENST00000620996 ASIC1P78348 528 aa11.18□□□□□ -0.62
VTA1-205ENST00000620996 TNFAIP1Q13829 316 aa11.18□□□□□ -0.62
VTA1-205ENST00000620996 ELOA2Q8IYF1 753 aaPredicted RBP11.18□□□□□ -0.62
VTA1-205ENST00000620996 SNX29Q8TEQ0 813 aa11.18□□□□□ -0.62
VTA1-205ENST00000620996 CACTINQ8WUQ7 758 aaKnown RBP11.18□□□□□ -0.62
VTA1-205ENST00000620996 GSDMAQ96QA5 445 aa11.18□□□□□ -0.62
VTA1-205ENST00000620996 SAMSN1Q9NSI8 373 aaKnown RBP11.18□□□□□ -0.62
VTA1-205ENST00000620996 HACL1Q9UJ83 578 aa11.18□□□□□ -0.62
VTA1-205ENST00000620996 GDAQ9Y2T3 454 aa11.18□□□□□ -0.62
VTA1-205ENST00000620996 CD2APQ9Y5K6 639 aa11.18□□□□□ -0.62
VTA1-205ENST00000620996 MORC2Q9Y6X9 1032 aaPredicted RBP11.18□□□□□ -0.62
VTA1-205ENST00000620996 CBFA2T2O43439 604 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 OFD1O75665 1012 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 CD44P16070 742 aaKnown RBP11.17□□□□□ -0.62
VTA1-205ENST00000620996 CDC25BP30305 580 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 CAP2P40123 477 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 PRKG1Q13976 671 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 KIF4BQ2VIQ3 1234 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 SH3RF1Q7Z6J0 888 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 FAM83AQ86UY5 434 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 MTRQ99707 1265 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 SH2D4AQ9H788 454 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 FBXO28Q9NVF7 368 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 FZD1Q9UP38 647 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 ZNF500O60304 480 aaPredicted RBP11.17□□□□□ -0.62
VTA1-205ENST00000620996 BRD2P25440 801 aaKnown RBP11.17□□□□□ -0.62
VTA1-205ENST00000620996 UBXN2AP68543 259 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 NOLC1Q14978 699 aaKnown RBP eCLIP11.17□□□□□ -0.62
VTA1-205ENST00000620996 PRR16Q569H4 304 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 NT5DC1Q5TFE4 455 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 KRT79Q5XKE5 535 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 RMND1Q9NWS8 449 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 PES1O00541 588 aaKnown RBP11.17□□□□□ -0.62
VTA1-205ENST00000620996 DGKZQ13574 1117 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 MTMR8Q96EF0 704 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 AK8Q96MA6 479 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 TMX2Q9Y320 296 aa11.17□□□□□ -0.62
VTA1-205ENST00000620996 ZNF541Q9H0D2 1346 aa11.16□□□□□ -0.62
VTA1-205ENST00000620996 SRCAPQ6ZRS2 3230 aa11.16□□□□□ -0.62
VTA1-205ENST00000620996 ASNSP08243 561 aa11.16□□□□□ -0.62
VTA1-205ENST00000620996 CCDC47Q96A33 483 aaKnown RBP11.16□□□□□ -0.62
VTA1-205ENST00000620996 TANGO6Q9C0B7 1094 aa11.16□□□□□ -0.62
VTA1-205ENST00000620996 GLT8D2Q9H1C3 349 aa11.16□□□□□ -0.62
VTA1-205ENST00000620996 CTDP1Q9Y5B0 961 aaPredicted RBP11.16□□□□□ -0.62
VTA1-205ENST00000620996 H7C1D1 291 aa11.16□□□□□ -0.62
VTA1-205ENST00000620996 IDEP14735 1019 aa11.16□□□□□ -0.62
VTA1-205ENST00000620996 NAALADL2Q58DX5 795 aa11.16□□□□□ -0.62
VTA1-205ENST00000620996 DYMQ7RTS9 669 aa11.16□□□□□ -0.62
VTA1-205ENST00000620996 CPXCR1Q8N123 301 aa11.16□□□□□ -0.62
VTA1-205ENST00000620996 MTMR14Q8NCE2 650 aa11.16□□□□□ -0.62
VTA1-205ENST00000620996 CCSER1Q9C0I3 900 aa11.16□□□□□ -0.62
VTA1-205ENST00000620996 DEFB129Q9H1M3 183 aa11.16□□□□□ -0.62
VTA1-205ENST00000620996 VCPKMTQ9H867 229 aa11.16□□□□□ -0.62
VTA1-205ENST00000620996 GOLGA8FQ08AF8 430 aa11.15□□□□□ -0.62
VTA1-205ENST00000620996 GOLGA8DPQ0D2H9 430 aa11.15□□□□□ -0.62
VTA1-205ENST00000620996 ANGEL2Q5VTE6 544 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms