RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 JRKLQ9Y4A0 524 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 CLASP1Q7Z460 1538 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 BAG2O95816 211 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 TFDP1Q14186 410 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 LRCH2Q5VUJ6 765 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 TMC4Q7Z404 712 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 CCDC197Q8NCU1 140 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19■□□□□ 0.632e-6■□□□□ 10.2
HMGXB3-206ENST00000613459 EPHB4P54760 987 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 PTK2Q05397 1052 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 PPP1R9AQ9ULJ8 1098 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 PPFIA2O75334 1257 aa18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 PRPSAP1Q14558 356 aa18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 FMNL1O95466 1100 aaPredicted RBP18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 SYMPKQ92797 1274 aaKnown RBP18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 PLA2G4DQ86XP0 818 aa18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 TUBB6Q9BUF5 446 aa18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 LSG1Q9H089 658 aaKnown RBP18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 FAF1Q9UNN5 650 aaPredicted RBP18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 GINS2Q9Y248 185 aa18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 CSADQ9Y600 493 aa18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 COG7P83436 770 aa18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 PLCB4Q15147 1175 aa18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 CFAP61Q8NHU2 1237 aa18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 ST7Q9NRC1 585 aa18.99■□□□□ 0.63
HMGXB3-206ENST00000613459 CAPN9O14815 690 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 WDR46O15213 610 aaKnown RBP18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 TMEM191BP0C7N4 346 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 PHKG2P15735 406 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 MYL7Q01449 175 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 ZNF710Q8N1W2 664 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 BANK1Q8NDB2 785 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 PALM3A6NDB9 673 aaPredicted RBP18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 ZMYM1Q5SVZ6 1142 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 RPAINQ86UA6 219 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 CNOT6LQ96LI5 555 aaKnown RBP18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 MED10Q9BTT4 135 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 DISP1Q96F81 1524 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 BUB1O43683 1085 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 FGAP02671 866 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 TMOD1P28289 359 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 NT5C1BQ96P26 610 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 NDUFA8P51970 172 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 CERKLQ49MI3 558 aaPredicted RBP18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 SDCCAG3Q96C92 435 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 CCDC68Q9H2F9 335 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 SRGAP2BP0DMP2 458 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 EFCC1Q9HA90 598 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 PCDHA4Q9UN74 947 aa18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 RRP15Q9Y3B9 282 aaKnown RBP18.98■□□□□ 0.63
HMGXB3-206ENST00000613459 MLH3Q9UHC1 1453 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 OATP04181 439 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 PPARDQ03181 441 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 TCP10Q12799 353 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 GRM1Q13255 1194 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 RASEFQ8IZ41 740 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 RDH13Q8NBN7 331 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 DPH5Q9H2P9 285 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 SF3A3Q12874 501 aaKnown RBP eCLIP18.97■□□□□ 0.632e-10■■■■□ 21
HMGXB3-206ENST00000613459 PTGDRQ13258 359 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 CLTAP09496 248 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 TUBGCP2Q9BSJ2 902 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 ATG3Q9NT62 314 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 ICA1Q05084 483 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 ANKRD20A4Q4UJ75 823 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 ANKRD20A8PQ5CZ79 823 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 ANKRD20A2Q5SQ80 823 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 ANKRD20A1Q5TYW2 823 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 PBKQ96KB5 322 aa18.97■□□□□ 0.63
HMGXB3-206ENST00000613459 TESPA1A2RU30 521 aaPredicted RBP18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 CCT5P48643 541 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 NXNQ6DKJ4 435 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 PLEKHA4Q9H4M7 779 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 CNOT10Q9H9A5 744 aaKnown RBP18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 SPATS2LQ9NUQ6 558 aaKnown RBP18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 GCC2Q8IWJ2 1684 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 hCG_1642624A0A1W2PR95 340 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 PPIP5K2O43314 1243 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 PSMC2P35998 433 aaKnown RBP18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 GTF2IP78347 998 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 MAN2A1Q16706 1144 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 RSPH3Q86UC2 560 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 AMNQ9BXJ7 453 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 BAG5Q9UL15 447 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 BTBD18B2RXH4 712 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 ZBTB24O43167 697 aaPredicted RBP18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 DNAJC8O75937 253 aaPredicted RBP18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 ADD1P35611 737 aaKnown RBP18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 PYCARDQ9ULZ3 195 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 RBBP5Q15291 538 aaKnown RBP18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 LARP4BQ92615 738 aaKnown RBP18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 ATP6V0A1Q93050 837 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 TRIM56Q9BRZ2 755 aaKnown RBP18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 TPX2Q9ULW0 747 aaKnown RBP18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 MAP3K15Q6ZN16 1313 aa18.96■□□□□ 0.63
HMGXB3-206ENST00000613459 KPNA2P52292 529 aaKnown RBP18.95■□□□□ 0.62
HMGXB3-206ENST00000613459 ZBTB17Q13105 803 aa18.95■□□□□ 0.62
HMGXB3-206ENST00000613459 P2RX5Q93086 422 aa18.95■□□□□ 0.62
HMGXB3-206ENST00000613459 WDR11Q9BZH6 1224 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms