RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 MAMDC4Q6UXC1 1216 aa26.65■■□□□ 1.86
SNX5-217ENST00000606557 MCF2L2Q86YR7 1114 aa26.65■■□□□ 1.86
SNX5-217ENST00000606557 MSL3Q8N5Y2 521 aaKnown RBP26.65■■□□□ 1.86
SNX5-217ENST00000606557 TBC1D5Q92609 795 aa26.65■■□□□ 1.86
SNX5-217ENST00000606557 GHRHRQ02643 423 aa26.64■■□□□ 1.86
SNX5-217ENST00000606557 STK3Q13188 491 aa26.64■■□□□ 1.86
SNX5-217ENST00000606557 PURBQ96QR8 312 aaKnown RBP26.64■■□□□ 1.86
SNX5-217ENST00000606557 RPTORQ8N122 1335 aa26.64■■□□□ 1.85
SNX5-217ENST00000606557 CALML3P27482 149 aa26.63■■□□□ 1.85
SNX5-217ENST00000606557 HMX1Q9NP08 348 aaPredicted RBP26.63■■□□□ 1.85
SNX5-217ENST00000606557 V9GY48 417 aaPredicted RBP26.63■■□□□ 1.85
SNX5-217ENST00000606557 SYNGAP1Q96PV0 1343 aa26.63■■□□□ 1.85
SNX5-217ENST00000606557 CYBAP13498 195 aa26.62■■□□□ 1.85
SNX5-217ENST00000606557 IFNAR1P17181 557 aa26.62■■□□□ 1.85
SNX5-217ENST00000606557 HSD17B4P51659 736 aa26.62■■□□□ 1.85
SNX5-217ENST00000606557 NOL8Q76FK4 1167 aaKnown RBP26.62■■□□□ 1.85
SNX5-217ENST00000606557 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.62■■□□□ 1.852e-6■□□□□ 9.9
SNX5-217ENST00000606557 RNF208Q9H0X6 261 aa26.62■■□□□ 1.85
SNX5-217ENST00000606557 PAK6Q9NQU5 681 aaPredicted RBP26.62■■□□□ 1.85
SNX5-217ENST00000606557 PFKFB2O60825 505 aa26.61■■□□□ 1.85
SNX5-217ENST00000606557 CFBP00751 764 aa26.61■■□□□ 1.85
SNX5-217ENST00000606557 CCND3P30281 292 aaPredicted RBP26.61■■□□□ 1.85
SNX5-217ENST00000606557 RABEP1Q15276 862 aa26.61■■□□□ 1.85
SNX5-217ENST00000606557 TRPV1Q8NER1 839 aa26.61■■□□□ 1.85
SNX5-217ENST00000606557 SYTL5Q8TDW5 730 aaPredicted RBP26.61■■□□□ 1.85
SNX5-217ENST00000606557 GPKOWQ92917 476 aaPredicted RBP eCLIP26.61■■□□□ 1.85
SNX5-217ENST00000606557 PHKBQ93100 1093 aa26.61■■□□□ 1.85
SNX5-217ENST00000606557 TMEM106CQ9BVX2 250 aa26.61■■□□□ 1.85
SNX5-217ENST00000606557 SLKQ9H2G2 1235 aaPredicted RBP26.61■■□□□ 1.85
SNX5-217ENST00000606557 COL20A1Q9P218 1284 aa26.61■■□□□ 1.85
SNX5-217ENST00000606557 ADD3Q9UEY8 706 aaKnown RBP26.61■■□□□ 1.85
SNX5-217ENST00000606557 SNAI1O95863 264 aaPredicted RBP26.6■■□□□ 1.85
SNX5-217ENST00000606557 ALDH5A1P51649 535 aaPredicted RBP26.6■■□□□ 1.85
SNX5-217ENST00000606557 SCRN1Q12765 414 aa26.6■■□□□ 1.85
SNX5-217ENST00000606557 WWC2Q6AWC2 1192 aa26.6■■□□□ 1.85
SNX5-217ENST00000606557 ARMCX2Q7L311 632 aa26.6■■□□□ 1.85
SNX5-217ENST00000606557 HEATR3Q7Z4Q2 680 aa26.6■■□□□ 1.85
SNX5-217ENST00000606557 SAMD3Q8N6K7 520 aa26.6■■□□□ 1.85
SNX5-217ENST00000606557 RNF26Q9BY78 433 aaPredicted RBP26.6■■□□□ 1.85
SNX5-217ENST00000606557 MAP3K20Q9NYL2 800 aaKnown RBP26.6■■□□□ 1.85
SNX5-217ENST00000606557 ASB14A6NK59 587 aa26.59■■□□□ 1.85
SNX5-217ENST00000606557 PRPF3O43395 683 aaKnown RBP26.59■■□□□ 1.85
SNX5-217ENST00000606557 LARGE1O95461 756 aa26.59■■□□□ 1.85
SNX5-217ENST00000606557 ME3Q16798 604 aa26.59■■□□□ 1.85
SNX5-217ENST00000606557 PRAMEF19Q5SWL8 479 aa26.59■■□□□ 1.85
SNX5-217ENST00000606557 DNERQ8NFT8 737 aa26.59■■□□□ 1.85
SNX5-217ENST00000606557 RBM27Q9P2N5 1060 aaKnown RBP26.59■■□□□ 1.85
SNX5-217ENST00000606557 NRBP1Q9UHY1 535 aa26.59■■□□□ 1.85
SNX5-217ENST00000606557 KIAA1217Q5T5P2 1943 aa26.59■■□□□ 1.85
SNX5-217ENST00000606557 LOC102724159A0A0B4J2E5 919 aa26.58■■□□□ 1.85
SNX5-217ENST00000606557 POTEFA5A3E0 1075 aa26.58■■□□□ 1.85
SNX5-217ENST00000606557 hCG_1984214I3L0E3 225 aa26.58■■□□□ 1.85
SNX5-217ENST00000606557 CPLX1O14810 134 aa26.58■■□□□ 1.85
SNX5-217ENST00000606557 PPFIA3O75145 1194 aa26.58■■□□□ 1.85
SNX5-217ENST00000606557 GJB1P08034 283 aa26.58■■□□□ 1.85
SNX5-217ENST00000606557 SOX10P56693 466 aa26.58■■□□□ 1.85
SNX5-217ENST00000606557 PWP2Q15269 919 aaKnown RBP26.58■■□□□ 1.85
SNX5-217ENST00000606557 PFKFB3Q16875 520 aaPredicted RBP26.58■■□□□ 1.85
SNX5-217ENST00000606557 ZNF713Q8N859 430 aaPredicted RBP26.58■■□□□ 1.85
SNX5-217ENST00000606557 MORC4Q8TE76 937 aa26.58■■□□□ 1.85
SNX5-217ENST00000606557 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.58■■□□□ 1.85
SNX5-217ENST00000606557 DDX49Q9Y6V7 483 aaKnown RBP26.58■■□□□ 1.85
SNX5-217ENST00000606557 GCOM1H8Y6P7 765 aaPredicted RBP26.57■■□□□ 1.84
SNX5-217ENST00000606557 POLR2MP0CAP2 368 aa26.57■■□□□ 1.84
SNX5-217ENST00000606557 HOXA13P31271 388 aaPredicted RBP26.57■■□□□ 1.84
SNX5-217ENST00000606557 PKN1Q16512 942 aa26.57■■□□□ 1.84
SNX5-217ENST00000606557 TYW1BQ6NUM6 668 aa26.57■■□□□ 1.84
SNX5-217ENST00000606557 TAAR1Q96RJ0 339 aa26.57■■□□□ 1.84
SNX5-217ENST00000606557 SLC26A6Q9BXS9 759 aa26.57■■□□□ 1.84
SNX5-217ENST00000606557 CNPY2Q9Y2B0 182 aa26.57■■□□□ 1.84
SNX5-217ENST00000606557 STXBP3O00186 592 aa26.56■■□□□ 1.84
SNX5-217ENST00000606557 ZNF865P0CJ78 1059 aaPredicted RBP26.56■■□□□ 1.84
SNX5-217ENST00000606557 SCG2P13521 617 aa26.56■■□□□ 1.84
SNX5-217ENST00000606557 PPP1R18Q6NYC8 613 aa26.56■■□□□ 1.84
SNX5-217ENST00000606557 CPLX2Q6PUV4 134 aaKnown RBP26.56■■□□□ 1.84
SNX5-217ENST00000606557 GTF3C6Q969F1 213 aa26.56■■□□□ 1.84
SNX5-217ENST00000606557 DEFB118Q96PH6 123 aa26.56■■□□□ 1.84
SNX5-217ENST00000606557 KATNBL1Q9H079 304 aa26.56■■□□□ 1.84
SNX5-217ENST00000606557 BARHL2Q9NY43 387 aa26.56■■□□□ 1.84
SNX5-217ENST00000606557 NAPAP54920 295 aa26.55■■□□□ 1.84
SNX5-217ENST00000606557 AKAP17AQ02040 695 aaKnown RBP26.55■■□□□ 1.84
SNX5-217ENST00000606557 NECAB1Q8N987 351 aa26.55■■□□□ 1.84
SNX5-217ENST00000606557 ABHD16BQ9H3Z7 469 aa26.55■■□□□ 1.84
SNX5-217ENST00000606557 LIMCH1Q9UPQ0 1083 aa26.55■■□□□ 1.84
SNX5-217ENST00000606557 PIK3CDO00329 1044 aa26.54■■□□□ 1.84
SNX5-217ENST00000606557 CAPN15O75808 1086 aa26.54■■□□□ 1.84
SNX5-217ENST00000606557 EDNRBP24530 442 aa26.54■■□□□ 1.84
SNX5-217ENST00000606557 CNGA1P29973 690 aa26.54■■□□□ 1.84
SNX5-217ENST00000606557 GJA8P48165 433 aa26.54■■□□□ 1.84
SNX5-217ENST00000606557 SSRP1Q08945 709 aaKnown RBP26.54■■□□□ 1.84
SNX5-217ENST00000606557 TRIM22Q8IYM9 498 aa26.54■■□□□ 1.84
SNX5-217ENST00000606557 U2AF1L4Q8WU68 220 aaKnown RBP26.54■■□□□ 1.84
SNX5-217ENST00000606557 RMDN3Q96TC7 470 aa26.54■■□□□ 1.84
SNX5-217ENST00000606557 PSTPIP2Q9H939 334 aa26.54■■□□□ 1.84
SNX5-217ENST00000606557 MEIS2O14770 477 aa26.53■■□□□ 1.84
SNX5-217ENST00000606557 SEPT4O43236 478 aa26.53■■□□□ 1.84
SNX5-217ENST00000606557 CDKL5O76039 1030 aa26.53■■□□□ 1.84
SNX5-217ENST00000606557 SGPL1O95470 568 aa26.53■■□□□ 1.84
SNX5-217ENST00000606557 ACVR2BQ13705 512 aa26.53■■□□□ 1.84
SNX5-217ENST00000606557 USP17L6PQ6QN14 398 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms