RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 CFBP00751 764 aa23.02■■□□□ 1.28
SHKBP1-222ENST00000600320 HOXA13P31271 388 aaPredicted RBP23.02■■□□□ 1.28
SHKBP1-222ENST00000600320 MCF2L2Q86YR7 1114 aa23.02■■□□□ 1.28
SHKBP1-222ENST00000600320 TNS4Q8IZW8 715 aa23.02■■□□□ 1.28
SHKBP1-222ENST00000600320 SPRYD3Q8NCJ5 442 aa23.02■■□□□ 1.28
SHKBP1-222ENST00000600320 RGS22Q8NE09 1264 aa23.02■■□□□ 1.28
SHKBP1-222ENST00000600320 SYTL5Q8TDW5 730 aaPredicted RBP23.02■■□□□ 1.28
SHKBP1-222ENST00000600320 USP6NLQ92738 828 aa23.02■■□□□ 1.28
SHKBP1-222ENST00000600320 ZMYND12Q9H0C1 365 aa23.02■■□□□ 1.28
SHKBP1-222ENST00000600320 ZNF236Q9UL36 1845 aa23.02■■□□□ 1.28
SHKBP1-222ENST00000600320 LCTP09848 1927 aa23.02■■□□□ 1.28
SHKBP1-222ENST00000600320 MEIS2O14770 477 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 CALML3P27482 149 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 HSD17B4P51659 736 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 ADCY7P51828 1080 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 NLRP5P59047 1200 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 PRKCZQ05513 592 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 MAP2K5Q13163 448 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 BECN1Q14457 450 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 NPY5RQ15761 445 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 UBE2SQ16763 222 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 USP17L6PQ6QN14 398 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 CCDC148Q8NFR7 591 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 FGD4Q96M96 766 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 PSTPIP2Q9H939 334 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 RIC8AQ9NPQ8 531 aa23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 ZNFX1Q9P2E3 1918 aaKnown RBP23.01■■□□□ 1.27
SHKBP1-222ENST00000600320 GCOM1H8Y6P7 765 aaPredicted RBP23■■□□□ 1.27
SHKBP1-222ENST00000600320 POLR2MP0CAP2 368 aa23■■□□□ 1.27
SHKBP1-222ENST00000600320 GUCY1B3Q02153 619 aa23■■□□□ 1.27
SHKBP1-222ENST00000600320 CNTN2Q02246 1040 aa23■■□□□ 1.27
SHKBP1-222ENST00000600320 FAM133AQ8N9E0 248 aa23■■□□□ 1.27
SHKBP1-222ENST00000600320 NPLOC4Q8TAT6 608 aa23■■□□□ 1.27
SHKBP1-222ENST00000600320 CCDC12Q8WUD4 166 aaPredicted RBP23■■□□□ 1.27
SHKBP1-222ENST00000600320 NUDT12Q9BQG2 462 aa23■■□□□ 1.27
SHKBP1-222ENST00000600320 PHF20Q9BVI0 1012 aa23■■□□□ 1.27
SHKBP1-222ENST00000600320 SRRDQ9UH36 339 aa23■■□□□ 1.27
SHKBP1-222ENST00000600320 PFASO15067 1338 aa23■■□□□ 1.27
SHKBP1-222ENST00000600320 POTEB2H3BUK9 544 aa22.99■■□□□ 1.27
SHKBP1-222ENST00000600320 FLT3LGP49771 235 aa22.99■■□□□ 1.27
SHKBP1-222ENST00000600320 ZNF792Q3KQV3 632 aa22.99■■□□□ 1.27
SHKBP1-222ENST00000600320 KRT40Q6A162 431 aa22.99■■□□□ 1.27
SHKBP1-222ENST00000600320 OTOP1Q7RTM1 612 aa22.99■■□□□ 1.27
SHKBP1-222ENST00000600320 SOCS4Q8WXH5 440 aa22.99■■□□□ 1.27
SHKBP1-222ENST00000600320 CUL5Q93034 780 aa22.99■■□□□ 1.27
SHKBP1-222ENST00000600320 C8orf76Q96K31 380 aa22.99■■□□□ 1.27
SHKBP1-222ENST00000600320 C6orf50Q9HD87 102 aa22.99■■□□□ 1.27
SHKBP1-222ENST00000600320 TMEM260Q9NX78 707 aa22.99■■□□□ 1.27
SHKBP1-222ENST00000600320 TRIM17Q9Y577 477 aa22.99■■□□□ 1.27
SHKBP1-222ENST00000600320 ASTN1O14525 1302 aa22.99■■□□□ 1.27
SHKBP1-222ENST00000600320 SOWAHBA6NEL2 793 aa22.98■■□□□ 1.27
SHKBP1-222ENST00000600320 PIK3CDO00329 1044 aa22.98■■□□□ 1.27
SHKBP1-222ENST00000600320 CYP2B6P20813 491 aa22.98■■□□□ 1.27
SHKBP1-222ENST00000600320 ANP32AP39687 249 aaKnown RBP22.98■■□□□ 1.27
SHKBP1-222ENST00000600320 MRPL12P52815 198 aaKnown RBP22.98■■□□□ 1.27
SHKBP1-222ENST00000600320 RASGRP4Q8TDF6 673 aa22.98■■□□□ 1.27
SHKBP1-222ENST00000600320 TAAR1Q96RJ0 339 aa22.98■■□□□ 1.27
SHKBP1-222ENST00000600320 MAF1Q9H063 256 aa22.98■■□□□ 1.27
SHKBP1-222ENST00000600320 HSP90AA1P07900 732 aaKnown RBP22.97■■□□□ 1.27
SHKBP1-222ENST00000600320 XBP1P17861 261 aa22.97■■□□□ 1.27
SHKBP1-222ENST00000600320 HOXD10P28358 340 aa22.97■■□□□ 1.27
SHKBP1-222ENST00000600320 RGS2P41220 211 aa22.97■■□□□ 1.27
SHKBP1-222ENST00000600320 CLK2P49760 499 aaKnown RBP22.97■■□□□ 1.27
SHKBP1-222ENST00000600320 DPP9Q86TI2 863 aa22.97■■□□□ 1.27
SHKBP1-222ENST00000600320 FCHSD1Q86WN1 690 aa22.97■■□□□ 1.27
SHKBP1-222ENST00000600320 FAM177A1Q8N128 213 aaPredicted RBP22.97■■□□□ 1.27
SHKBP1-222ENST00000600320 SAMD3Q8N6K7 520 aa22.97■■□□□ 1.27
SHKBP1-222ENST00000600320 DAGLBQ8NCG7 672 aa22.97■■□□□ 1.27
SHKBP1-222ENST00000600320 MAP3K20Q9NYL2 800 aaKnown RBP22.97■■□□□ 1.27
SHKBP1-222ENST00000600320 PCDHA4Q9UN74 947 aa22.97■■□□□ 1.27
SHKBP1-222ENST00000600320 GNRH1P01148 92 aa22.96■■□□□ 1.27
SHKBP1-222ENST00000600320 HOXC6P09630 235 aa22.96■■□□□ 1.27
SHKBP1-222ENST00000600320 GNA11P29992 359 aa22.96■■□□□ 1.27
SHKBP1-222ENST00000600320 ARHGEF6Q15052 776 aa22.96■■□□□ 1.27
SHKBP1-222ENST00000600320 BLIDQ8IZY5 108 aa22.96■■□□□ 1.27
SHKBP1-222ENST00000600320 FBXO18Q8NFZ0 1043 aa22.96■■□□□ 1.27
SHKBP1-222ENST00000600320 OXER1Q8TDS5 423 aa22.96■■□□□ 1.27
SHKBP1-222ENST00000600320 PGBD1Q96JS3 809 aa22.96■■□□□ 1.27
SHKBP1-222ENST00000600320 BIN2Q9UBW5 565 aaPredicted RBP22.96■■□□□ 1.27
SHKBP1-222ENST00000600320 KIF3AQ9Y496 699 aa22.96■■□□□ 1.27
SHKBP1-222ENST00000600320 DDX49Q9Y6V7 483 aaKnown RBP22.96■■□□□ 1.27
SHKBP1-222ENST00000600320 M0R2N6 131 aa22.95■■□□□ 1.26
SHKBP1-222ENST00000600320 MMP1P03956 469 aa22.95■■□□□ 1.26
SHKBP1-222ENST00000600320 TRIM29Q14134 588 aa22.95■■□□□ 1.26
SHKBP1-222ENST00000600320 CCL14Q16627 93 aa22.95■■□□□ 1.26
SHKBP1-222ENST00000600320 JAKMIP3Q5VZ66 844 aa22.95■■□□□ 1.26
SHKBP1-222ENST00000600320 APBA2Q99767 749 aa22.95■■□□□ 1.26
SHKBP1-222ENST00000600320 PRDM10Q9NQV6 1147 aa22.95■■□□□ 1.26
SHKBP1-222ENST00000600320 FLRT1Q9NZU1 646 aa22.95■■□□□ 1.26
SHKBP1-222ENST00000600320 PLXNA1Q9UIW2 1896 aa22.95■■□□□ 1.26
SHKBP1-222ENST00000600320 GALNT17Q6IS24 598 aa22.94■■□□□ 1.26
SHKBP1-222ENST00000600320 REXO1Q8N1G1 1221 aaKnown RBP22.94■■□□□ 1.26
SHKBP1-222ENST00000600320 MAML3Q96JK9 1138 aa22.94■■□□□ 1.26
SHKBP1-222ENST00000600320 GLT8D2Q9H1C3 349 aa22.94■■□□□ 1.26
SHKBP1-222ENST00000600320 PCDHA6Q9UN73 950 aa22.94■■□□□ 1.26
SHKBP1-222ENST00000600320 DIS3Q9Y2L1 958 aaKnown RBP22.94■■□□□ 1.26
SHKBP1-222ENST00000600320 PCDHA8Q9Y5H6 950 aa22.94■■□□□ 1.26
SHKBP1-222ENST00000600320 ALDH5A1P51649 535 aaPredicted RBP22.93■■□□□ 1.26
SHKBP1-222ENST00000600320 IRF5Q13568 498 aa22.93■■□□□ 1.26
SHKBP1-222ENST00000600320 LARP1BQ659C4 914 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms