RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 FGFR1OPO95684 399 aaKnown RBP13.81□□□□□ -0.2
PDE4A-207ENST00000590407 GNA11P29992 359 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 PDE4DQ08499 809 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 NONOQ15233 471 aaKnown RBP eCLIP13.81□□□□□ -0.2
PDE4A-207ENST00000590407 SPA17Q15506 151 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 CCDC70Q6NSX1 233 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 SRLQ86TD4 932 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 ZNF713Q8N859 430 aaPredicted RBP13.81□□□□□ -0.2
PDE4A-207ENST00000590407 NOC4LQ9BVI4 516 aaKnown RBP13.81□□□□□ -0.2
PDE4A-207ENST00000590407 ZNF287Q9HBT7 754 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 SNX12Q9UMY4 172 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 RNF40O75150 1001 aa13.8□□□□□ -0.2
PDE4A-207ENST00000590407 MTIF2P46199 727 aaKnown RBP13.8□□□□□ -0.2
PDE4A-207ENST00000590407 NOVP48745 357 aa13.8□□□□□ -0.2
PDE4A-207ENST00000590407 TXNRD1Q16881 649 aa13.8□□□□□ -0.2
PDE4A-207ENST00000590407 HEATR3Q7Z4Q2 680 aa13.8□□□□□ -0.2
PDE4A-207ENST00000590407 CCDC84Q86UT8 332 aaPredicted RBP13.8□□□□□ -0.2
PDE4A-207ENST00000590407 CCDC155Q8N6L0 562 aa13.8□□□□□ -0.2
PDE4A-207ENST00000590407 NAV1Q8NEY1 1877 aa13.8□□□□□ -0.2
PDE4A-207ENST00000590407 SECISBP2LQ93073 1101 aaKnown RBP13.8□□□□□ -0.2
PDE4A-207ENST00000590407 NLRP3Q96P20 1036 aa13.8□□□□□ -0.2
PDE4A-207ENST00000590407 SIK3Q9Y2K2 1263 aa13.8□□□□□ -0.2
PDE4A-207ENST00000590407 MYO1CO00159 1063 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 PES1O00541 588 aaKnown RBP13.79□□□□□ -0.2
PDE4A-207ENST00000590407 ENC1O14682 589 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 PJA2O43164 708 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 TACC1O75410 805 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 BAG3O95817 575 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 TCP1P17987 556 aaKnown RBP13.79□□□□□ -0.2
PDE4A-207ENST00000590407 TNFRSF8P28908 595 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 ASIC1P78348 528 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 STK4Q13043 487 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 BARGINQ6ZT62 677 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 C15orf52Q6ZUT6 534 aaKnown RBP13.79□□□□□ -0.2
PDE4A-207ENST00000590407 NEK8Q86SG6 692 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 ZNF444Q8N0Y2 327 aaPredicted RBP13.79□□□□□ -0.2
PDE4A-207ENST00000590407 GUF1Q8N442 669 aaKnown RBP13.79□□□□□ -0.2
PDE4A-207ENST00000590407 GOLGA6L1Q8N7Z2 621 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 AFAP1L1Q8TED9 768 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 AENQ8WTP8 325 aaKnown RBP13.79□□□□□ -0.2
PDE4A-207ENST00000590407 CCDC42Q96M95 316 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 TMEM47Q9BQJ4 181 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 SH2D4AQ9H788 454 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 FAM204AQ9H8W3 233 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 MKNK2Q9HBH9 465 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 C6orf50Q9HD87 102 aa13.79□□□□□ -0.2
PDE4A-207ENST00000590407 SHOX2O60902 331 aaPredicted RBP13.78□□□□□ -0.2
PDE4A-207ENST00000590407 LDHCP07864 332 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 TSPY3P0CV98 308 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 TSPY8P0CW00 308 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 RASA1P20936 1047 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.2
PDE4A-207ENST00000590407 LRRC63Q05C16 580 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 VWA3BQ502W6 1294 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 RC3H1Q5TC82 1133 aaKnown RBP13.78□□□□□ -0.2
PDE4A-207ENST00000590407 UNC13DQ70J99 1090 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 CREG2Q8IUH2 290 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 KIAA0895Q8NCT3 520 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 CALML4Q96GE6 196 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 ACSBG1Q96GR2 724 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 MMTAG2Q9BU76 263 aaKnown RBP13.78□□□□□ -0.2
PDE4A-207ENST00000590407 RASSF4Q9H2L5 321 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 TFCP2L1Q9NZI6 479 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 FAM184BQ9ULE4 1060 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 RRP15Q9Y3B9 282 aaKnown RBP13.78□□□□□ -0.2
PDE4A-207ENST00000590407 TNRC6CQ9HCJ0 1690 aaKnown RBP13.78□□□□□ -0.2
PDE4A-207ENST00000590407 DDX60LQ5H9U9 1706 aaKnown RBP13.78□□□□□ -0.2
PDE4A-207ENST00000590407 KLRF2D3W0D1 207 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 PDE2AO00408 941 aaPredicted RBP13.78□□□□□ -0.2
PDE4A-207ENST00000590407 ZNF263O14978 683 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 LDHBP07195 334 aaKnown RBP13.78□□□□□ -0.2
PDE4A-207ENST00000590407 IDEP14735 1019 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 MAN2A1Q16706 1144 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 TBC1D9BQ66K14 1250 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 LINC00116Q8NCU8 138 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 MTMR9Q96QG7 549 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 LRRC27Q9C0I9 530 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 SEMA6BQ9H3T3 888 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 NARFQ9UHQ1 456 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 LEMD3Q9Y2U8 911 aa13.78□□□□□ -0.2
PDE4A-207ENST00000590407 SSU72P8A0A1W2PR75 194 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 USP17L3A6NCW0 530 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 USP17L4A6NCW7 530 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 SRGAP2O75044 1071 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 PPFIA4O75335 1185 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 NAPAP54920 295 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 PSMD2Q13200 908 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.21
PDE4A-207ENST00000590407 LRRC31Q6UY01 552 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 SV2BQ7L1I2 683 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 USP17L1Q7RTZ2 530 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 PROM2Q8N271 834 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 NEDD1Q8NHV4 660 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 CAGE1Q8TC20 777 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 CRACR2AQ9BSW2 395 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 SELENOOQ9BVL4 669 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 RNF14Q9UBS8 474 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 TSKSQ9UJT2 592 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 PCDHA13Q9Y5I0 950 aa13.77□□□□□ -0.21
PDE4A-207ENST00000590407 SPATA31A5Q5VU36 1347 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms