RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 TRIM27P14373 513 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 EPB42P16452 691 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 RPL13P26373 211 aaKnown RBP6.33□□□□□ -1.4
LINC01538-201ENST00000588074 MAPRE1Q15691 268 aaKnown RBP6.33□□□□□ -1.4
LINC01538-201ENST00000588074 CLPPQ16740 277 aaPredicted RBP6.33□□□□□ -1.4
LINC01538-201ENST00000588074 HGSNATQ68CP4 663 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 ADGRD1Q6QNK2 874 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 PASD1Q8IV76 773 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 AFAP1Q8N556 730 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 ATP11CQ8NB49 1132 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 MAGEC3Q8TD91 643 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 ZFAND2BQ8WV99 257 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 AIDAQ96BJ3 306 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 ZSCAN10Q96SZ4 725 aaPredicted RBP6.33□□□□□ -1.4
LINC01538-201ENST00000588074 MAK16Q9BXY0 300 aaKnown RBP6.33□□□□□ -1.4
LINC01538-201ENST00000588074 RABL2AQ9UBK7 228 aaPredicted RBP6.33□□□□□ -1.4
LINC01538-201ENST00000588074 ITGB1BP2Q9UKP3 347 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 EXOC6BQ9Y2D4 811 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 WDR62O43379 1518 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 LTBP3Q9NS15 1303 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 DNMBPQ6XZF7 1577 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 KIF21BO75037 1637 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 KDM5BQ9UGL1 1544 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 SYCE3A1L190 88 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 SPDYE3A6NKU9 549 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 CILPO75339 1184 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 ROR2Q01974 943 aaKnown RBP6.33□□□□□ -1.4
LINC01538-201ENST00000588074 ZNF460Q14592 562 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 SMC1AQ14683 1233 aaKnown RBP6.33□□□□□ -1.4
LINC01538-201ENST00000588074 CEP135Q66GS9 1140 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 CWC27Q6UX04 472 aaKnown RBP6.33□□□□□ -1.4
LINC01538-201ENST00000588074 BRAPQ7Z569 592 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 NECAB2Q7Z6G3 386 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 TMEM110Q86TL2 294 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 CCDC170Q8IYT3 715 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 SMYD1Q8NB12 490 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 ARHGAP45Q92619 1136 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 TRIM11Q96F44 468 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 RSRC1Q96IZ7 334 aaKnown RBP6.33□□□□□ -1.4
LINC01538-201ENST00000588074 ALS2CR12Q96Q35 445 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 ZKSCAN3Q9BRR0 538 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 TRIM4Q9C037 500 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 KCNF1Q9H3M0 494 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 SEC31BQ9NQW1 1179 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 EXOC1Q9NV70 894 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 N6AMT1Q9Y5N5 214 aa6.33□□□□□ -1.4
LINC01538-201ENST00000588074 EVC2Q86UK5 1308 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 ZNF608Q9ULD9 1512 aaPredicted RBP6.32□□□□□ -1.4
LINC01538-201ENST00000588074 DNAJC25-GNG10A0A024R161 153 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 ATP6V1G1O75348 118 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 HOXD10P28358 340 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 ABCB5Q2M3G0 1257 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 IER5Q5VY09 327 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 SLC30A9Q6PML9 568 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 EEPD1Q7L9B9 569 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 ANKRD42Q8N9B4 389 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 PJA1Q8NG27 643 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 SLC7A3Q8WY07 619 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 CCDC47Q96A33 483 aaKnown RBP6.32□□□□□ -1.4
LINC01538-201ENST00000588074 NACC2Q96BF6 587 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 RUSC1Q9BVN2 902 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 SARGQ9BW04 601 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 SEZ6LQ9BYH1 1024 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 ATP6V0A4Q9HBG4 840 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 HOXC10Q9NYD6 342 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 DDX20Q9UHI6 824 aaKnown RBP6.32□□□□□ -1.4
LINC01538-201ENST00000588074 PPP2R3BQ9Y5P8 575 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 MRFAP1Q9Y605 127 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 ROBO2Q9HCK4 1378 aa6.32□□□□□ -1.4
LINC01538-201ENST00000588074 AQRO60306 1485 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC01538-201ENST00000588074 DYTNA2CJ06 578 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 CEP104O60308 925 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 DNAJC8O75937 253 aaPredicted RBP6.31□□□□□ -1.4
LINC01538-201ENST00000588074 ADH1AP07327 375 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 PTPN11Q06124 597 aaPredicted RBP6.31□□□□□ -1.4
LINC01538-201ENST00000588074 NSUN2Q08J23 767 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC01538-201ENST00000588074 C4orf17Q53FE4 359 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 PLEKHO1Q53GL0 409 aaPredicted RBP6.31□□□□□ -1.4
LINC01538-201ENST00000588074 MCTP1Q6DN14 999 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 TMEM214Q6NUQ4 689 aaKnown RBP6.31□□□□□ -1.4
LINC01538-201ENST00000588074 CCDC50Q8IVM0 306 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 RNF168Q8IYW5 571 aaPredicted RBP6.31□□□□□ -1.4
LINC01538-201ENST00000588074 REXO1Q8N1G1 1221 aaKnown RBP6.31□□□□□ -1.4
LINC01538-201ENST00000588074 GBP7Q8N8V2 638 aaPredicted RBP6.31□□□□□ -1.4
LINC01538-201ENST00000588074 CCDC150Q8NCX0 1101 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 EHBP1Q8NDI1 1231 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 WNT2BQ93097 391 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 LGR4Q9BXB1 951 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 ARHGEF4Q9NR80 690 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 ZBTB21Q9ULJ3 1066 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 LRRC10BA6NIK2 292 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 PLD2O14939 933 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 SUSD5O60279 629 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 ZNF189O75820 626 aaPredicted RBP6.31□□□□□ -1.4
LINC01538-201ENST00000588074 TUBB4AP04350 444 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 MYL3P08590 195 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 CCDC159P0C7I6 412 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 MSL3P1P0C860 447 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 ACRP10323 421 aa6.31□□□□□ -1.4
LINC01538-201ENST00000588074 PURAQ00577 322 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms