RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 GP2P55259 537 aaKnown RBP7.12□□□□□ -1.27
SMAD4-203ENST00000585448 ZSCAN23Q3MJ62 389 aa7.12□□□□□ -1.27
SMAD4-203ENST00000585448 TMPRSS7Q7RTY8 843 aa7.12□□□□□ -1.27
SMAD4-203ENST00000585448 TMEM192Q8IY95 271 aa7.12□□□□□ -1.27
SMAD4-203ENST00000585448 FBXO18Q8NFZ0 1043 aa7.12□□□□□ -1.27
SMAD4-203ENST00000585448 HSPA12BQ96MM6 686 aa7.12□□□□□ -1.27
SMAD4-203ENST00000585448 FAM107BQ9H098 131 aa7.12□□□□□ -1.27
SMAD4-203ENST00000585448 TMX4Q9H1E5 349 aaPredicted RBP7.12□□□□□ -1.27
SMAD4-203ENST00000585448 TMX1Q9H3N1 280 aa7.12□□□□□ -1.27
SMAD4-203ENST00000585448 ETAA1Q9NY74 926 aa7.12□□□□□ -1.27
SMAD4-203ENST00000585448 PSD3Q9NYI0 1048 aa7.12□□□□□ -1.27
SMAD4-203ENST00000585448 SUCOQ9UBS9 1254 aaKnown RBP7.12□□□□□ -1.27
SMAD4-203ENST00000585448 SMC3Q9UQE7 1217 aa7.12□□□□□ -1.27
SMAD4-203ENST00000585448 RRP15Q9Y3B9 282 aaKnown RBP7.12□□□□□ -1.27
SMAD4-203ENST00000585448 MIA2Q96PC5 1412 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 CGNL1Q0VF96 1302 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 SGSM2O43147 1006 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 ATP8B1O43520 1251 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 FUT4P22083 530 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 CD151P48509 253 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 PMS1P54277 932 aaKnown RBP7.11□□□□□ -1.27
SMAD4-203ENST00000585448 ARID5AQ03989 594 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 ADCY2Q08462 1091 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 ZRSR1Q15695 479 aaKnown RBP7.11□□□□□ -1.27
SMAD4-203ENST00000585448 GAB4Q2WGN9 574 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 ANKRD39Q53RE8 183 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 ANGEL2Q5VTE6 544 aaKnown RBP7.11□□□□□ -1.27
SMAD4-203ENST00000585448 AP1ARQ63HQ0 302 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 CCDC81Q6ZN84 652 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 KRBA2Q6ZNG9 492 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 CCDC191Q8NCU4 936 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 FLCNQ8NFG4 579 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 DUSP15Q9H1R2 295 aaPredicted RBP7.11□□□□□ -1.27
SMAD4-203ENST00000585448 A1CFQ9NQ94 594 aaKnown RBP7.11□□□□□ -1.27
SMAD4-203ENST00000585448 ZNF446Q9NWS9 450 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 RPS6KL1Q9Y6S9 549 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 RAD54L2Q9Y4B4 1467 aa7.11□□□□□ -1.27
SMAD4-203ENST00000585448 KIF2AO00139 706 aaPredicted RBP7.1□□□□□ -1.27
SMAD4-203ENST00000585448 SMC2O95347 1197 aa7.1□□□□□ -1.27
SMAD4-203ENST00000585448 CD8BP10966 210 aa7.1□□□□□ -1.27
SMAD4-203ENST00000585448 TNNT1P13805 278 aa7.1□□□□□ -1.27
SMAD4-203ENST00000585448 MAGEA8P43361 318 aa7.1□□□□□ -1.27
SMAD4-203ENST00000585448 RWDD2BP57060 319 aa7.1□□□□□ -1.27
SMAD4-203ENST00000585448 CHMP4BP1P59074 171 aa7.1□□□□□ -1.27
SMAD4-203ENST00000585448 ICA1Q05084 483 aa7.1□□□□□ -1.27
SMAD4-203ENST00000585448 BBS9Q3SYG4 887 aa7.1□□□□□ -1.27
SMAD4-203ENST00000585448 CCDC30Q5VVM6 783 aa7.1□□□□□ -1.27
SMAD4-203ENST00000585448 FBXW10Q5XX13 1052 aa7.1□□□□□ -1.27
SMAD4-203ENST00000585448 WWC2Q6AWC2 1192 aa7.1□□□□□ -1.27
SMAD4-203ENST00000585448 SPRED2Q7Z698 418 aa7.1□□□□□ -1.27
SMAD4-203ENST00000585448 SLC6A18Q96N87 628 aa7.1□□□□□ -1.27
SMAD4-203ENST00000585448 SH3GL3Q99963 347 aa7.1□□□□□ -1.27
SMAD4-203ENST00000585448 PHAXQ9H814 394 aaKnown RBP7.1□□□□□ -1.27
SMAD4-203ENST00000585448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.09□□□□□ -1.27
SMAD4-203ENST00000585448 TMCO5BA8MYB1 307 aa7.09□□□□□ -1.27
SMAD4-203ENST00000585448 MBD3O95983 291 aa7.09□□□□□ -1.27
SMAD4-203ENST00000585448 PAX7P23759 505 aa7.09□□□□□ -1.27
SMAD4-203ENST00000585448 GYS2P54840 703 aa7.09□□□□□ -1.27
SMAD4-203ENST00000585448 MYBPC2Q14324 1141 aa7.09□□□□□ -1.27
SMAD4-203ENST00000585448 PDCD2Q16342 344 aaPredicted RBP7.09□□□□□ -1.27
SMAD4-203ENST00000585448 CDC37Q16543 378 aaPredicted RBP7.09□□□□□ -1.27
SMAD4-203ENST00000585448 XP32Q5T750 250 aa7.09□□□□□ -1.27
SMAD4-203ENST00000585448 C1QTNF12Q5T7M4 302 aa7.09□□□□□ -1.27
SMAD4-203ENST00000585448 C20orf194Q5TEA3 1177 aa7.09□□□□□ -1.27
SMAD4-203ENST00000585448 TTLL5Q6EMB2 1281 aa7.09□□□□□ -1.27
SMAD4-203ENST00000585448 UNC5AQ6ZN44 842 aa7.09□□□□□ -1.27
SMAD4-203ENST00000585448 CBLL1Q75N03 491 aa7.09□□□□□ -1.27
SMAD4-203ENST00000585448 TSPYL5Q86VY4 417 aaPredicted RBP7.09□□□□□ -1.27
SMAD4-203ENST00000585448 SYTL5Q8TDW5 730 aaPredicted RBP7.09□□□□□ -1.27
SMAD4-203ENST00000585448 SYAP1Q96A49 352 aaPredicted RBP7.09□□□□□ -1.27
SMAD4-203ENST00000585448 C22orf23Q9BZE7 217 aa7.09□□□□□ -1.27
SMAD4-203ENST00000585448 GPATCH2Q9NW75 528 aa7.09□□□□□ -1.27
SMAD4-203ENST00000585448 ZNF214Q9UL59 606 aaPredicted RBP7.09□□□□□ -1.27
SMAD4-203ENST00000585448 DHX29Q7Z478 1369 aaKnown RBP7.08□□□□□ -1.28
SMAD4-203ENST00000585448 KDM5BQ9UGL1 1544 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 A0A1W2PQH9 124 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 PPFIA2O75334 1257 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 BAG4O95429 457 aaKnown RBP7.08□□□□□ -1.28
SMAD4-203ENST00000585448 ABCD1P33897 745 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 BNIP3Q12983 259 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 SART3Q15020 963 aaKnown RBP7.08□□□□□ -1.28
SMAD4-203ENST00000585448 TNNI3KQ59H18 835 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 CDKAL1Q5VV42 579 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 SLC23A3Q6PIS1 610 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 TTC6Q86TZ1 520 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 SKAP1Q86WV1 359 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 MCF2L2Q86YR7 1114 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 SDR16C5Q8N3Y7 309 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 CCDC112Q8NEF3 446 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 KIAA1524Q8TCG1 905 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 CPLX3Q8WVH0 158 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.08□□□□□ -1.28
SMAD4-203ENST00000585448 LRRFIP2Q9Y608 721 aaKnown RBP7.08□□□□□ -1.28
SMAD4-203ENST00000585448 SYNJ1O43426 1573 aa7.08□□□□□ -1.28
SMAD4-203ENST00000585448 POLA1P09884 1462 aaPredicted RBP7.07□□□□□ -1.28
SMAD4-203ENST00000585448 H3BS24 57 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 LRRN2O75325 713 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 RPS6KA5O75582 802 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 ZYXQ15942 572 aaKnown RBP7.07□□□□□ -1.28
SMAD4-203ENST00000585448 NAALADL2Q58DX5 795 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms