RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 FLRT1Q9NZU1 646 aa18.49■□□□□ 0.55
CSNK1D-223ENST00000584472 RBM19Q9Y4C8 960 aaKnown RBP18.49■□□□□ 0.55
CSNK1D-223ENST00000584472 NR2E3Q9Y5X4 410 aa18.49■□□□□ 0.55
CSNK1D-223ENST00000584472 CYTH3O43739 400 aa18.48■□□□□ 0.55
CSNK1D-223ENST00000584472 FUT2Q10981 343 aa18.48■□□□□ 0.55
CSNK1D-223ENST00000584472 NECAB2Q7Z6G3 386 aa18.48■□□□□ 0.55
CSNK1D-223ENST00000584472 CCDC83Q8IWF9 413 aa18.48■□□□□ 0.55
CSNK1D-223ENST00000584472 SPZ1Q9BXG8 430 aa18.48■□□□□ 0.55
CSNK1D-223ENST00000584472 RIOX1Q9H6W3 641 aa18.48■□□□□ 0.55
CSNK1D-223ENST00000584472 A1CFQ9NQ94 594 aaKnown RBP18.48■□□□□ 0.55
CSNK1D-223ENST00000584472 SMCHD1A6NHR9 2005 aa18.48■□□□□ 0.55
CSNK1D-223ENST00000584472 RANBP2P49792 3224 aaKnown RBP18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 CPLX1O14810 134 aa18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 MSCO60682 206 aa18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 CTDNEP1O95476 244 aa18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 IFNAR1P17181 557 aa18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 CACNB2Q08289 660 aaPredicted RBP18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 TRIM32Q13049 653 aa18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 CUL4AQ13619 759 aa18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 QRICH1Q2TAL8 776 aa18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 MUM1L1Q5H9M0 696 aa18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 HABP4Q5JVS0 413 aaKnown RBP18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 CPLX2Q6PUV4 134 aaKnown RBP18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 ZNF467Q7Z7K2 595 aaPredicted RBP18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 CCDC82Q8N4S0 544 aa18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 MSL3Q8N5Y2 521 aaKnown RBP18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 MAF1Q9H063 256 aa18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 CNTNAP5Q8WYK1 1306 aa18.47■□□□□ 0.55
CSNK1D-223ENST00000584472 H0YGN5 161 aa18.46■□□□□ 0.55
CSNK1D-223ENST00000584472 ZBTB5O15062 677 aa18.46■□□□□ 0.55
CSNK1D-223ENST00000584472 TRAF1Q13077 416 aa18.46■□□□□ 0.55
CSNK1D-223ENST00000584472 FBXO11Q86XK2 927 aa18.46■□□□□ 0.55
CSNK1D-223ENST00000584472 DPF3Q92784 378 aa18.46■□□□□ 0.55
CSNK1D-223ENST00000584472 VAT1LQ9HCJ6 419 aa18.46■□□□□ 0.55
CSNK1D-223ENST00000584472 CYP39A1Q9NYL5 469 aa18.46■□□□□ 0.55
CSNK1D-223ENST00000584472 NRBP1Q9UHY1 535 aa18.46■□□□□ 0.55
CSNK1D-223ENST00000584472 ABCB11O95342 1321 aa18.46■□□□□ 0.55
CSNK1D-223ENST00000584472 POTEB2H3BUK9 544 aa18.45■□□□□ 0.54
CSNK1D-223ENST00000584472 CYP2C19P33261 490 aa18.45■□□□□ 0.54
CSNK1D-223ENST00000584472 ANP32AP39687 249 aaKnown RBP18.45■□□□□ 0.54
CSNK1D-223ENST00000584472 MAMDC4Q6UXC1 1216 aa18.45■□□□□ 0.54
CSNK1D-223ENST00000584472 FAM133AQ8N9E0 248 aa18.45■□□□□ 0.54
CSNK1D-223ENST00000584472 RGS22Q8NE09 1264 aa18.45■□□□□ 0.54
CSNK1D-223ENST00000584472 CLEC4DQ8WXI8 215 aa18.45■□□□□ 0.54
CSNK1D-223ENST00000584472 PHKBQ93100 1093 aa18.45■□□□□ 0.54
CSNK1D-223ENST00000584472 TINF2Q9BSI4 451 aa18.45■□□□□ 0.54
CSNK1D-223ENST00000584472 AMNQ9BXJ7 453 aa18.45■□□□□ 0.54
CSNK1D-223ENST00000584472 PCDH10Q9P2E7 1040 aa18.45■□□□□ 0.54
CSNK1D-223ENST00000584472 SYNGAP1Q96PV0 1343 aa18.45■□□□□ 0.54
CSNK1D-223ENST00000584472 NFIBO00712 420 aa18.44■□□□□ 0.54
CSNK1D-223ENST00000584472 CDKL5O76039 1030 aa18.44■□□□□ 0.54
CSNK1D-223ENST00000584472 CYBAP13498 195 aa18.44■□□□□ 0.54
CSNK1D-223ENST00000584472 TAL1P17542 331 aaPredicted RBP18.44■□□□□ 0.54
CSNK1D-223ENST00000584472 MNX1P50219 401 aaPredicted RBP18.44■□□□□ 0.54
CSNK1D-223ENST00000584472 BECN1Q14457 450 aa18.44■□□□□ 0.54
CSNK1D-223ENST00000584472 USH1GQ495M9 461 aa18.44■□□□□ 0.54
CSNK1D-223ENST00000584472 NSMFQ6X4W1 530 aa18.44■□□□□ 0.54
CSNK1D-223ENST00000584472 NSUN7Q8NE18 718 aaKnown RBP18.44■□□□□ 0.54
CSNK1D-223ENST00000584472 PAWRQ96IZ0 340 aaKnown RBP18.44■□□□□ 0.54
CSNK1D-223ENST00000584472 FGD4Q96M96 766 aa18.44■□□□□ 0.54
CSNK1D-223ENST00000584472 LLPHQ9BRT6 129 aaKnown RBP18.44■□□□□ 0.54
CSNK1D-223ENST00000584472 RNF26Q9BY78 433 aaPredicted RBP18.44■□□□□ 0.54
CSNK1D-223ENST00000584472 PNMA6FA0A0J9YX94 578 aa18.43■□□□□ 0.54
CSNK1D-223ENST00000584472 DTNBO60941 627 aa18.43■□□□□ 0.54
CSNK1D-223ENST00000584472 LHX8Q68G74 356 aa18.43■□□□□ 0.54
CSNK1D-223ENST00000584472 SMARCC2Q8TAQ2 1214 aa18.43■□□□□ 0.54
CSNK1D-223ENST00000584472 PIGSQ96S52 555 aa18.43■□□□□ 0.54
CSNK1D-223ENST00000584472 SLC26A6Q9BXS9 759 aa18.43■□□□□ 0.54
CSNK1D-223ENST00000584472 MRPL11Q9Y3B7 192 aaKnown RBP18.43■□□□□ 0.54
CSNK1D-223ENST00000584472 LCTP09848 1927 aa18.43■□□□□ 0.54
CSNK1D-223ENST00000584472 LOC102724159A0A0B4J2E5 919 aa18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 A0A1W2PPC1 479 aa18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 PTPDC1A2A3K4 754 aa18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 PRPF3O43395 683 aaKnown RBP18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 EVI5O60447 810 aa18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 JAK2O60674 1132 aa18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 PPP1R11O60927 126 aaPredicted RBP18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 PPFIA3O75145 1194 aa18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 CCND3P30281 292 aaPredicted RBP18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 CNTN2Q02246 1040 aa18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 SSRP1Q08945 709 aaKnown RBP18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 BAATQ14032 418 aaPredicted RBP18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 PWP2Q15269 919 aaKnown RBP18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 HOMER1Q86YM7 354 aa18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 MCF2L2Q86YR7 1114 aa18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 PIBF1Q8WXW3 757 aa18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 RRP36Q96EU6 259 aaKnown RBP18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 PRO3102Q9H379 93 aa18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 V9GY48 417 aaPredicted RBP18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 STK36Q9NRP7 1315 aa18.42■□□□□ 0.54
CSNK1D-223ENST00000584472 hCG_1642624A0A1W2PR95 340 aa18.41■□□□□ 0.54
CSNK1D-223ENST00000584472 COL6A1P12109 1028 aa18.41■□□□□ 0.54
CSNK1D-223ENST00000584472 RNF207Q6ZRF8 634 aa18.41■□□□□ 0.54
CSNK1D-223ENST00000584472 TRIM22Q8IYM9 498 aa18.41■□□□□ 0.54
CSNK1D-223ENST00000584472 TRPV1Q8NER1 839 aa18.41■□□□□ 0.54
CSNK1D-223ENST00000584472 INTS4Q96HW7 963 aaKnown RBP18.41■□□□□ 0.54
CSNK1D-223ENST00000584472 C11orf49Q9H6J7 331 aa18.41■□□□□ 0.54
CSNK1D-223ENST00000584472 RBM27Q9P2N5 1060 aaKnown RBP18.41■□□□□ 0.54
CSNK1D-223ENST00000584472 ADD3Q9UEY8 706 aaKnown RBP18.41■□□□□ 0.54
CSNK1D-223ENST00000584472 COLQQ9Y215 455 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms